Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_013694.1 Length=51376 Score E Sequences producing significant alignments: (Bits) Value seq2905 89.7 2e-13 >seq2905 Length=1000 Score = 89.7 bits (98), Expect = 2e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 32523 GTAGAACGAGGCCGAGGCGTGCTCCAGCACGCTCTCGTGGCCGACCTCGAGGATGTGTGC 32582 ||||| ||| | ||| ||||||| |||||| ||| |||||||| |||||||| Sbjct 562 GTAGACGGAGACGGAGCCGTGCTCGAGCACGGAGAGGTGCCCGACCTCCAGGATGTGGCG 621 Query 32583 GAGGTAGTCCTCGTTCTCCCGAGTGGCCGGGTTCGGCCGGTCGAACGACCGGTAGCAGTT 32642 || ||| |||||||| | || |||||||||| || ||||| |||||||| Sbjct 622 GATGTACCCCTCGTTCGTCGCCGTCTTCGGGTTCGGCTTGTTCCACGACTGGTAGCAGGC 681 Query 32643 GCGGCCCGCGAACTCCGCG 32661 |||||| |||||||||||| Sbjct 682 GCGGCCGGCGAACTCCGCG 700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164273529358372