Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq2625 122 3e-22 seq3072 118 4e-21 seq4017 116 1e-20 seq3104 116 1e-20 seq897 113 2e-19 seq4073 102 3e-16 seq487 95.1 5e-14 >seq2625 Length=346021 Score = 122 bits (134), Expect = 3e-22 Identities = 162/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| ||||||| || || |||||| | || ||||| || Sbjct 281335 ATGCAGATTTTCGTCAAAACCTTGACTGGCAAGACGATTACTTTGGAGGTTGAGAGTTCC 281394 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | ||| ||||||||||| ||||| ||||||||||| || || Sbjct 281395 GACACCATTGACAATGTGAAAACCAAAATTCAAGACAAGGAGGGAATTCCTCCAGACCAG 281454 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || ||||| | |||||||| ||||||||||| | || | || ||||| || Sbjct 281455 CAGAGATTGATTTTTGCCGGGAAACAGCTTGAAGATGGTCGGACACTCGCCGATTACAAC 281514 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| | || | || || || | || ||||||||| Sbjct 281515 ATCCAAAAGGAATCTACCTTGCATTTGGTCCTGAGGCTGAGAGGA 281559 Score = 118 bits (130), Expect = 4e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || || |||| ||||| || ||||||||||| ||||| || Sbjct 282018 AATGCAGATTTTCGTGAAGACCTTGACAGGTAAGACCATTACTCTTGAGGTTGAGAGCTC 282077 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| || || | || || |||||||| ||||| ||||| || || || || Sbjct 282078 AGATACTATCGACAACGTGAAGACGAAGATTCAAGACAAGGAGGGAATCCCCCCAGACCA 282137 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || | || |||||| |||| || ||||| || |||||||||| | | ||||||||||| Sbjct 282138 GCAGAGGTTGATTTTCGCAGGAAAGCAACTCGAGGATGGAAGAATTCTAGCGGATTATAA 282197 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | || | ||||| || Sbjct 282198 TATCCAAAAGGAATCTACTTTGCACTTGGT 282227 Score = 111 bits (122), Expect = 6e-19 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||||||||| || || || || || || |||||||| || || ||| Sbjct 281563 ATGCAAATCTTCGTTAAAACCCTCACCGGCAAGACCATAACTCTTGAGGTGGAGAGCTCT 281622 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | ||| || ||||| || |||||||| || ||||| ||||| Sbjct 281623 GACACGATTGATAACGTGAAAACGAAGATTCAGGACAAGGAAGGCATCCCTCCAGATCAG 281682 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || ||||| | || || |||||||| ||||| || || ||||| || || || Sbjct 281683 CAGAGGTTGATTTTTGCCGGAAAGCAACTTGAGGATGGGAGGACGTTGGCCGACTACAAC 281742 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || || || || || || || |||||||| Sbjct 281743 ATCCAAAAGGAATCTACCCTCCATTTGGTTTTGAGGCTGAGAGG 281786 Score = 100 bits (110), Expect = 1e-15 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || || || || || |||||||| || ||| ||| Sbjct 280195 ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACCATCACTCTTGAGGTCGAAAGCTCT 280254 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | || ||||||||||||||||| || ||||| ||||| || Sbjct 280255 GATACGATCGACAATGTGAAGACGAAAATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 280314 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || || |||||| | || |||||||| ||||| || | || |||| || || || Sbjct 280315 CAGCGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGCACGCTGGCCGACTACAAC 280374 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | || || | || | || | || || || ||| ||||| Sbjct 280375 ATCCAAAAAGAGTCCACTTTGCATCTTGTGTTGAGGCTGCGAGGA 280419 Score = 95.1 bits (104), Expect = 5e-14 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||||||||| ||||| || ||||| ||||| || || || || ||| Sbjct 280423 ATGCAAATTTTCGTTAAAACTCTGACGGGGAAAACCATTACCCTCGAGGTCGAGAGTTCT 280482 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || || || || |||||||| ||||| || || ||||| Sbjct 280483 GACACCATCGACAATGTCAAGACTAAGATCCAGGATAAGGAGGGAATCCCCCCAGATCAG 280542 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || ||| | || |||||||| || || || | || |||| || || || Sbjct 280543 CAGAGGTTGATCTTCGCCGGCAAACAACTAGAGGACGGCCGGACGCTGGCCGACTACAAC 280602 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 ||| | || || | || ||||| | || | ||| |||| ||| Sbjct 280603 ATTCAGAAAGAGTCCACGCTTCATCTTGTTCTGAGATTGAGGGGA 280647 Score = 86.0 bits (94), Expect = 2e-11 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || || || || || ||||| || || || |||||| || Sbjct 281107 ATGCAGATTTTCGTCAAGACTCTTACAGGGAAGACTATCACCCTGGAGGTTGAAAGCTCC 281166 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | || || || |||||||||||||||||||| || ||||| Sbjct 281167 GATACTATCGACAACGTGAAGACTAAGATCCAAGATAAGGAAGGAATTCCACCAGATCAG 281226 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || || ||||| | || || || | || || || |||| |||| || || || Sbjct 281227 CAGCGGTTGATTTTTGCCGGTAAGCAGTTGGAGGACGGCCGAACGCTGGCTGACTACAAC 281286 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| | || || || | || || ||| |||| ||| Sbjct 281287 ATCCAAAAGGAGTCCACTCTCCATCTGGTGTTGAGATTGAGGGGA 281331 >seq3072 Length=975934 Score = 118 bits (130), Expect = 4e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || || |||||||||| || ||||||||||| ||||| || Sbjct 271810 AATGCAGATTTTCGTGAAGACCTTGACTGGTAAGACCATTACTCTTGAGGTTGAGAGCTC 271869 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| || || | || || |||||||| ||||| ||||| || || || || Sbjct 271870 AGATACTATCGACAACGTGAAGACGAAGATTCAAGACAAGGAGGGAATCCCCCCAGACCA 271929 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || | || ||||| |||| || ||||| || |||||||||| | | ||||||||||| Sbjct 271930 GCAGAGGTTGATTTTTGCAGGAAAGCAACTCGAGGATGGAAGAATTCTAGCGGATTATAA 271989 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | || | ||||| || Sbjct 271990 TATCCAAAAGGAATCCACTTTGCACTTGGT 272019 Score = 100 bits (110), Expect = 1e-15 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115 ||||| || || ||| |||| ||||| || || |||||||| ||||| || || | Sbjct 271589 ATTTTTGTGAAGACATTGACCGGTAAGACCATCACTCTTGAGGTTGAGAGCTCCGACACG 271648 Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175 ||||| | || || ||||||||||| || || ||||| || || || || | | Sbjct 271649 ATTGACAACGTGAAGACCAAGATTCAAGATAAAGAGGGCATTCCACCAGACCAGCAGCTT 271708 Query 391176 TTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGAT 391235 ||||||||| | ||||| |||||||| || || | || ||||| | || || || | Sbjct 271709 TTAATTTTCGCTGGGAAGCAACTTGAGGACGGTCGTACCTTGGCCGGCTAAAACATCCAA 271768 Query 391236 AAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACATTTTTT 391288 ||||| | || || || || || || || ||||| | | ||| || |||| Sbjct 271769 AAGGAGTCTACCCTCCATTTGGTCTTGAGGCTGAGGGAAGGAATGCAGATTTT 271821 >seq4017 Length=874442 Score = 116 bits (128), Expect = 1e-20 Identities = 164/227 (72%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||| ||||| || ||||| || || || || ||| Sbjct 472203 ATGCAGATCTTCGTCAAGACTTTGACGGGTAAGACAATTACCCTCGAGGTGGAGAGCTCT 472262 Query 391110 GATAACATTGAAGCTAT-TAAACAA-AAAATTCAAGATAAGGAAGGAATTCCTCCTGATC 391167 || | ||| || | || |||| | ||||||||||||||||| || ||||| || || | Sbjct 472263 GACACCATCGA--CAATGTAAAGACTAAAATTCAAGATAAGGAGGGTATTCCCCCAGACC 472320 Query 391168 AACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATA 391227 | || ||| | || || | || || || ||||| |||||||| || |||| ||||| | Sbjct 472321 AGCAGCGTCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGAAGGACGCTGGCTGATTACA 472380 Query 391228 ATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 | || | ||||| | || |||||| | || | |||||||||||| Sbjct 472381 ACATCCAAAAGGAGTCCACCCTTCACCTGGTTCTGAGACTGAGAGGA 472427 Score = 111 bits (122), Expect = 6e-19 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||| || || || |||||||| || ||||| || Sbjct 472431 ATGCAAATCTTCGTCAAGACGTTGACAGGAAAGACCATTACTCTCGAGGTTGAGAGTTCC 472490 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || || || ||||||||||| || ||||| || || || Sbjct 472491 GACACCATCGATAATGTGAAGACTAAGATCCAAGATAAGGAGGGTATTCCCCCAGACCAG 472550 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||||| || ||| |||| ||||| ||||| || || |||||| |||| || || || Sbjct 472551 CAGCGTTTGATCTTCGCAGGTAAACAGCTTGAGGACGGTAGAACTCTGGCCGACTACAAC 472610 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| | || || ||| | || || || ||||||| Sbjct 472611 ATTCAAAAGGAGTCTACCCTCCACCTCGTGTTGAGGTTGAGAGG 472654 Score = 111 bits (122), Expect = 6e-19 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||| || || ||||| ||||| || || ||| ||| Sbjct 473571 ATGCAGATCTTCGTGAAGACCTTGACCGGGAAGACTATCACTCTCGAGGTCGAAAGCTCT 473630 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | ||| || || || || ||||||||||||||||| ||||| Sbjct 473631 GACACCATCGACAATGTCAAAACCAAGATCCAGGACAAGGAAGGAATTCCTCCCGATCAG 473690 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || |||| || || || ||||||||| |||| |||||||||| ||| Sbjct 473691 CAGAGATTGATCTTTGCAGGAAAGCAGCTGGAAGATGGACGAACCCTGGCGGATTACAAT 473750 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | || || |||| || || | || | || ||| |||| Sbjct 473751 ATCCAAAAAGAATCAACTCTGCATCTTGTTCTGAGGCTGCGAGG 473794 Score = 107 bits (118), Expect = 8e-18 Identities = 158/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||| || || || || || | || || || || Sbjct 473115 ATGCAGATTTTCGTGAAGACTCTGACAGGCAAGACCATCACCTTGGAGGTGGAGAGTTCC 473174 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || ||||||||||| |||||||| ||||| || || || Sbjct 473175 GACACCATCGACAATGTGAAGACCAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAG 473234 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || || || ||| | |||||||| || |||||||| || |||||||| || ||||| Sbjct 473235 CAGCGATTGATCTTCGCTGGGAAACAGCTCGAAGATGGCAGGACTTTGGCCGACTATAAC 473294 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || ||||| | || || | ||||||| Sbjct 473295 ATCCAAAAGGAGTCTACTCTTCATCTTGTGTTGCGGTTGAGAGG 473338 Score = 102 bits (112), Expect = 3e-16 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||| || || ||||| || | || || || ||| Sbjct 472887 ATGCAGATTTTCGTGAAGACTCTGACAGGCAAGACTATAACCTTGGAGGTGGAGAGTTCT 472946 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | || ||||| ||||||||||| || |||||||| ||||| Sbjct 472947 GACACTATCGACAATGTGAAGACTAAAATCCAAGATAAGGAGGGTATTCCTCCAGATCAG 473006 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || || || ||| | || || || || ||||||||||| || |||| || || || Sbjct 473007 CAGCGATTGATCTTCGCCGGCAAGCAGCTCGAAGATGGAAGGACCCTGGCCGACTACAAC 473066 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || |||||| | || | || ||||||| Sbjct 473067 ATCCAAAAGGAGTCTACCCTTCACCTCGTCCTGAGGTTGAGAGG 473110 >seq3104 Length=626175 Score = 116 bits (128), Expect = 1e-20 Identities = 181/254 (71%), Gaps = 10/254 (4%) Strand=Plus/Plus Query 451340 GCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTA 451399 || || ||||| ||||| ||||| |||||||| || ||||| ||| |||||| || | Sbjct 110247 GCCTACTTCAACGATGCCCAACGTCAAGCAACCAAGGATGCCGGAGTTATTGCCGGACTG 110306 Query 451400 AATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAA 451459 || || || || || ||||||||||| || || ||| | || || ||||| ||| Sbjct 110307 AACGTAGCCCGTATCATCAATGAACCTACTGCCGCGGCTATTGCCTACGGACT-GGA--- 110362 Query 451460 TCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGAT 451519 ||| | | || |||| ||||||| | || ||||| || || || || | ||| Sbjct 110363 -CAAGA-AGGGAGGAGAACAAAATATCCTTGTCTTTGACTTGGGAGGTGGTA--CATTCG 110418 Query 451520 ACTTCTGTACTTT--CAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATA 451577 | || ||| ||| | ||||| ||||| || || || || ||| ||||||||||||| Sbjct 110419 ATGTCAGTATTTTGACCATTGACGATGGAGTCTTCGAGGTTTTGGCTACCAATGGTGATA 110478 Query 451578 CTCATCTAGGAGGT 451591 | ||||| |||||| Sbjct 110479 CCCATCTTGGAGGT 110492 Score = 87.8 bits (96), Expect = 7e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 |||||||| ||||| || ||||||| || ||||| ||||||||| ||||||| |||| Sbjct 109453 ATTGGAATAGATCTGGGTACCACCTACTCTTGTGTCGGTGTTTACAAAAATGGTCATGTG 109512 Query 450977 GAAATTATAGCAAATGACCAAGG 450999 || ||||| || ||||||||||| Sbjct 109513 GAGATTATTGCCAATGACCAAGG 109535 >seq897 Length=979407 Score = 113 bits (124), Expect = 2e-19 Identities = 127/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 ||||| ||||||||| || || || ||| || |||| ||||| | | ||| Sbjct 887340 GTTCTAGGTAAAATGAAGGAGACTGCTGAATCTTACCTTGGACGACCAGTATCGAAAGCA 887399 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 ||||| ||||| || || |||||||||||||||||||| ||||| || || ||||||||| Sbjct 887400 GTAATCACTGTGCCGGCATATTTCAATGATGCACAACGCCAAGCTACCAAGGATGCAGGA 887459 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGC 451434 || || || | |||||||||| || || |||||||| || ||||| Sbjct 887460 AGAATAGCCGGGCTGGATGTTCTTCGTATCATCAATGAACCGACTGCAGC 887509 >seq4073 Length=488838 Score = 102 bits (112), Expect = 3e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||||||||| || || || || ||||| || || || || Sbjct 172999 ATGCAAATCTTCGTGAAAACACTGACCGGCAAGACCATCACTCTGGAGGTCGAGAGCTCG 172940 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | ||| || ||||| || |||||||| |||||||| ||||| Sbjct 172939 GACACCATCGACAACGTCAAAGCGAAGATTCAGGACAAGGAAGGTATTCCTCCCGATCAG 172880 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || ||| | || || ||||| |||||||| ||||| | || |||||||| Sbjct 172879 CAGAGGTTGATCTTCGCCGGTAAGCAACTCGAAGATGGGCGAACTCTTGCAGATTATAAC 172820 Query 391230 ATTGATAAGGA 391240 ||| | || || Sbjct 172819 ATTCAGAAAGA 172809 Score = 89.7 bits (98), Expect = 2e-12 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||| || || || || || | || || || || Sbjct 173911 ATGCAGATATTCGTGAAGACGCTGACGGGGAAGACCATCACGTTGGAGGTGGAGAGCTCC 173852 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | ||| || |||||||| ||||| || || |||||||| || Sbjct 173851 GATACGATCGATAATGTGAAAGTTAAGATTCAAGACAAGGAGGGGATCCCTCCTGACCAG 173792 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || | || || || || || ||||| | ||| |||||||||| || Sbjct 173791 CAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACTCTGGCGGATTACAAC 173732 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || || || || || || ||||||||||| Sbjct 173731 ATCCAGAAGGAGTCGACTCTCCATTTGGTGTTGAGACTGAGAGG 173688 Score = 86.0 bits (94), Expect = 2e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || ||||||| || || |||||| | || || ||| || Sbjct 173455 ATGCAGATTTTTGTCAAGACCTTGACTGGCAAGACCATTACTTTAGAGGTGGAAAGCTCC 173396 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || ||||| || || || |||||||| ||||||||||| Sbjct 173395 GACACGATCGACAACGTCAAGGCGAAAATCCAGGACAAAGAAGGAATCCCTCCTGATCAG 173336 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || ||| | || || || || |||||||| ||||| |||| || |||||| Sbjct 173335 CAGAGGTTGATCTTCGCCGGTAAGCAGCTCGAAGATGGGCGAACTCTGGCAGACTATAAT 173276 Query 391230 AT 391231 || Sbjct 173275 AT 173274 Score = 86.0 bits (94), Expect = 2e-11 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||||| || || || || | || || || ||| Sbjct 173683 ATGCAGATTTTCGTCAAGACCTTGACTGGAAAGACCATCACGTTGGAGGTCGAGAGCTCT 173624 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | || |||||||| || ||||| || ||||||||||| || Sbjct 173623 GACACGATCGACAATGTGAAGGTCAAAATTCAGGACAAGGAGGGGATTCCTCCTGACCAG 173564 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || || || || || ||||| | ||| |||||||||| || Sbjct 173563 CAGAGGCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACTCTGGCGGATTACAAC 173504 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| | || ||||| || || || || || |||||| Sbjct 173503 ATCCAAAAGGAATCGACGCTTCATTTGGTTTTGAGGCTCAGAGGA 173459 >seq487 Length=466406 Score = 95.1 bits (104), Expect = 5e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || ||||| || ||||| || ||||| || || || || Sbjct 183332 AATGCAAATCTTCGTCAAGACTCTGACGGGGAAAACCATCACTCTGGAAGTGGAGAGCTC 183391 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | ||| || | | ||| ||||| || || ||||| ||||||||||| || || Sbjct 183392 TGACACCATCGACAATGTGAAAGCCAAAATCCAGGACAAGGAGGGAATTCCTCCCGACCA 183451 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || || || || ||| | || || || || |||||||| | || |||| ||||| || Sbjct 183452 GCAGCGATTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGTACACTGGCCGATTACAA 183511 Query 391229 TATTGATAAGGA 391240 ||| | || || Sbjct 183512 CATTCAAAAAGA 183523 Score = 89.7 bits (98), Expect = 2e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || |||||||| || ||||| ||||| ||| | || || ||| || Sbjct 176580 ATGCAGATTTTTGTGAAAACACTCACCGGTAAGACTATCACTTTAGAAGTAGAAAGCTCC 176639 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | ||| |||||||| || ||||| ||||||||||| || || Sbjct 176640 GATACCATTGATAACGTCAAAGCCAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 176699 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || || || || || || || ||||| | || || || || Sbjct 176700 CAGAGGCTGATCTTTGCCGGTAAGCAGCTCGAGGACGGCCGAACTCTTGCAGACTACAAC 176759 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || ||||| || || Sbjct 176760 ATCCAAAAGGAGTCCACTCTTCATTTGGT 176788 Score = 89.7 bits (98), Expect = 2e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || ||||| || |||||||| || || ||| || Sbjct 177036 ATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACAATTACTCTGGAGGTGGAAAGCTCC 177095 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || || |||||||| || ||||||||||| || || || Sbjct 177096 GACACCATCGATAATGTCAAGGCTAAGATTCAAGACAAAGAAGGAATTCCCCCAGACCAG 177155 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || ||| | || || || || |||||||| ||||| | ||||| ||||| Sbjct 177156 CAGAGACTGATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGAACTCTCGCGGACTATAAC 177215 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || || || || Sbjct 177216 ATCCAAAAGGAGTCCACTCTCCATTTGGT 177244 Score = 86.0 bits (94), Expect = 2e-11 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| ||||| ||||| || ||||| || ||||| || || || || Sbjct 182781 AATGCAGATCTTCGTAAAAACGCTGACCGGCAAAACGATCACTCTGGAAGTGGAGAGCTC 182840 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || || ||||| || ||||| || ||||| || |||||||||||||| Sbjct 182841 CGACACTATCGACAACGTTAAAGCTAAGATTCAGGACAAGGAGGGCATTCCTCCTGATCA 182900 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | || || ||| | || || || || |||||||| | || | || || || || Sbjct 182901 GCAAAGATTGATCTTCGCTGGTAAGCAGCTCGAAGATGGTCGTACCCTCGCAGACTACAA 182960 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || || || || Sbjct 182961 CATCCAAAAGGAGTCCACTCTCCATTTGGT 182990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975613676428796