Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq487 116 2e-21 seq2625 107 1e-18 seq4017 96.9 2e-15 seq4073 95.1 8e-15 seq3072 87.8 1e-12 >seq487 Length=466406 Score = 116 bits (128), Expect = 2e-21 Identities = 168/235 (71%), Gaps = 8/235 (3%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||||| | |||||||||| ||| || ||||| ||||| || || | | Sbjct 182324 CCTCCCCTCAACCGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCTGCA 182265 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || | || || ||||| ||||| ||||| || | | |||||||| | || Sbjct 182264 AGGGTGCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGG 182205 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | |||||||| || |||||| || || || | ||||| || | | ||| Sbjct 182204 ATTCCCTCCTTATCCTGAATCTTGGCCTTCAC--AT--TGTCGATGGTATCGCTGCTCTC 182149 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTC 34985 || |||| || ||||| |||||||| || |||||||||||||||||||| ||| Sbjct 182148 GACCTCGAGCGTGATGGTCTTTCCCGTCAGCGTCTTCACAAAGATCTGCATGTTC 182094 Score = 113 bits (124), Expect = 3e-20 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||||| | |||| || | |||| ||| ||||| ||||| ||||| | | Sbjct 176122 CCTCCCCTCAACCGAAGCACCAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGCA 176063 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | ||| | || || || || || ||||| || || || | |||||||| | || Sbjct 176062 AGGGTGCGTCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCAGGAGGA 176003 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | ||||||||||| ||| || || || || | ||||| |||| | ||| Sbjct 176002 ATTCCCTCCTTGTCCTGAATTTTAACCTTCAC--AT--TGTCGATGGTATCACTGCTCTC 175947 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || |||| || ||||| || ||||| ||||||||||| ||||||||||| Sbjct 175946 GACCTCGAGCGTGATGGTCTTCCCCGTCAGAGTCTTCACGAAGATCTGCAT 175896 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||||| | |||||||||| || || || || ||||| ||||||| Sbjct 176350 CCTCCCCTCAACCGAAGCACCAAGTGAAGAGTCGACTCCTTTTGGATGTTGTAGTCCGCG 176291 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || |||| | || |||| || || || || || || || | ||||||||| | || Sbjct 176290 AGAGTTCGGCCGTCTTCCAATTGCTTGCCAGCGAAAATCAGCCTCTGCTGGTCTGGGGGA 176231 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| |||||| ||| ||| | || | || | ||| || Sbjct 176230 ATTCCCTCCTTGTCCTGAATCTTAGCTTTCACGTTGTCGATGGTGTCGGAGCTCTCCACC 176171 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| ||| ||||| || || || |||||||| || ||||||||||| Sbjct 176170 TCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 176124 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||||| | ||||| |||| ||| || || || ||||| ||||| | | Sbjct 176806 CCTCCCCTCAACCGAAGCACCAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCA 176747 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || |||| | || || ||||| || |||||||| || || | ||||||||| | || Sbjct 176746 AGAGTTCGGCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCTGGAGGA 176687 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||| || ||||||| | || | || | || || Sbjct 176686 ATTCCCTCCTTGTCCTGAATTTTGGCTTTGACGTTATCAATGGTATCGGAGCTTTCTACT 176627 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || || || || || ||||| || |||||||| ||||||||| Sbjct 176626 TCTAAAGTGATAGTCTTACCGGTGAGTGTTTTCACAAAAATCTGCATA 176579 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||| | | | ||||| || | ||| || || || ||||||||||||| Sbjct 177262 CCTCCCCTGAGACGAAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTATAGTCCGCG 177203 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || |||| |||| || ||||| || ||||| || || |||| ||||||||| | || Sbjct 177202 AGAGTTCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAGTCTCTGCTGGTCTGGGGGA 177143 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | || || ||||| |||||| ||||| || ||||||| || | || Sbjct 177142 ATTCCTTCTTTGTCTTGAATCTTAGCCTTGAC--AT--TATCGATGGTGTCGGAGCTTTC 177087 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | || || || || |||||||| |||||||| |||||||||||| Sbjct 177086 CACCTCCAGAGTAATTGTCTTACCCGTGAGGGTCTTCACGAAGATCTGCATA 177035 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||||| | | ||||| || | || || || || ||||| ||||| | Sbjct 177034 CCTCCCCTCAGACGAAGCACCAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCTGCG 176975 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| |||| ||| || ||||| || || | | |||||||| | || Sbjct 176974 AGGGTGCGGCCATCTTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCAGGGGGG 176915 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| ||||||| | || | || | ||| || Sbjct 176914 ATTCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATAGTGTCGGAGCTCTCCACC 176855 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| ||| |||||||| || || |||||||| || |||||||||||| Sbjct 176854 TCGAGGGTGATGGTTTTGCCAGTCAGAGTCTTGACGAAGATCTGCATA 176807 Score = 82.4 bits (90), Expect = 5e-11 Identities = 160/234 (68%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 34752 TTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCC 34811 |||||||| | || | ||| |||| || | || ||||| |||||||| || || Sbjct 183562 TTTCCTCCTCGCAGACGCAACACCAGATGCAACGTCGACTCTTTTTGAATGTTGTAATCG 183503 Query 34812 GAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGC 34871 | || | || |||| |||||||| || || || || || | ||| |||||||| | Sbjct 183502 GCCAGTGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCGGGA 183443 Query 34872 GGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGC 34927 || | ||||||||||| || || ||| || || | ||||| ||| | Sbjct 183442 GGAATTCCCTCCTTGTCCTGGATTTTGGCTTTCAC--AT--TGTCGATGGTGTCAGAGCT 183387 Query 34928 CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| || || | || |||||||| ||||| |||||||| || ||||| ||||| Sbjct 183386 CTCCACTTCCAGAGTGATGGTTTTCCCCGTCAGAGTCTTGACGAAGATTTGCAT 183333 >seq2625 Length=346021 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||||||||||| || | || | || ||||| || ||||| ||||||| Sbjct 280877 CCTCCCCTCAACCTCAGCACAAGATGCAGAGTCGACTCTTTTTGGATGTTGTAGTCCGCG 280818 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| |||| ||| || || ||||| || | | ||||| ||| | || Sbjct 280817 AGGGTACGACCATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGCTGATCTGGAGGG 280758 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG-CTATCGATTCACCGGCCTCAAC 34933 | ||||||||||| ||| || ||| || |||| | || | ||| | || || Sbjct 280757 ATTCCCTCCTTGTCCTGAATTTTGGTTTTCAC-GATGTCAATTGTGTCAGAGCTTTCGAC 280699 Query 34934 ATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | || |||||||| |||||||| |||||||| ||||||||||| Sbjct 280698 CTCCAACGTGATGGTTTTCCCCGTGAGCGTCTTCACGAAGATCTGCAT 280651 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 |||||||||||| |||||| ||||| || | || || || |||||||| ||||| | Sbjct 282019 TTCCTCCCCTCAGCCTCAAGACCAAATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGG 281960 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 | | | || | || || || || ||||| ||||| || | | ||||| ||| | | Sbjct 281959 CCAAGGTACGACCGTCCTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAG 281900 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || |||||||| ||||||| ||| ||| | |||| ||| | ||| | Sbjct 281899 GGATGCCTTCCTTGTCCTGAATCTTCGTTTTCACGTTGTCAATCGTGTCAGAGCTCTCCA 281840 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || | || ||||| || || || | ||||||||||| ||||||||| Sbjct 281839 CCTCAAGAGTGATGGTCTTACCGGTCAATGTCTTCACAAAAATCTGCATA 281790 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG-- 34812 || || |||| |||||||||||| || | || ||| || || ||||| ||||| | Sbjct 281789 CCACCTCTCAGCCTCAAAACCAAATGGAGGGTAGATTCCTTTTGGATGTTGTAGTCGGCC 281730 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 || | | || |||| || || || ||||||||||| || | | ||||| ||| | | Sbjct 281729 AACGTCCTCC--CATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAG 281672 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || |||||||| ||||||| ||| ||| | |||| ||| | ||| | Sbjct 281671 GGATGCCTTCCTTGTCCTGAATCTTCGTTTTCACGTTATCAATCGTGTCAGAGCTCTCCA 281612 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || | |||||||| || || ||||| || || || ||||| |||||| Sbjct 281611 CCTCAAGAGTTATGGTCTTGCCGGTGAGGGTTTTAACGAAGATTTGCATA 281562 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||| |||| ||| | |||| ||| |||||||||||||| ||||| | Sbjct 280649 CCTCCCCTCAATCTCAGAACAAGATGAAGCGTGGACTCTTTCTGAATGTTGTAGTCGGCC 280590 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || | || || || ||||| ||||| || || | | ||||| ||| | || Sbjct 280589 AGCGTCCGGCCGTCCTCTAGTTGTTTGCCGGCGAAGATCAACCTCTGCTGATCTGGGGGG 280530 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | |||||||| || ||||| ||||| || | ||||| ||| ||| Sbjct 280529 ATTCCCTCCTTATCCTGGATCTTAGTCTTGAC--AT--TGTCGATGGTGTCAGAACTCTC 280474 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || |||| ||| |||||||| ||||| ||||| || || || || |||||| Sbjct 280473 GACCTCGAGGGTAATGGTTTTCCCCGTCAGAGTTTTAACGAAAATTTGCATA 280422 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||| ||||| || | || | || || ||||| || ||||| || | Sbjct 281105 CCTCCCCTCAATCTCAAGACGAGATGGAGAGTAGACTCCTTCTGTATATTATAATCGGCC 281046 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || |||| | || |||| ||| || || ||||| || | || || |||||| | || Sbjct 281045 AGCGTTCGGCCGTCCTCCAACTGCTTACCTGCAAAGATCAATCTCTGTTGGTCTGGAGGA 280986 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | |||||||| || ||||| ||||||| | || | || | || || Sbjct 280985 ATACCCTCCTTATCTTGGATCTTGGTTTTGACGTTGTCGATGGTGTCGGAGCTTTCGACC 280926 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | ||| ||||| ||||| || || ||||||||||| |||||||| Sbjct 280925 TCCAAGGTGATGGTCTTTCCTGTAAGCGTCTTCACAAATATCTGCAT 280879 Score = 84.2 bits (92), Expect = 1e-11 Identities = 160/236 (68%), Gaps = 10/236 (4%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| | || |||| |||||| || | ||||| || ||||| || || ||||| | Sbjct 280193 CCTCCACGCAGTCTCAGAACCAAATGCAGAGTGCTCTCCTTCTGGATATTGTAGTCGGCC 280134 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | || || |||| || || || || ||||| || || | || |||||||| | || Sbjct 280133 AAACTGCGACCATCCTCGAGTTGCTTGCCGGCGAAAATCAACCGCTGCTGGTCAGGGGGG 280074 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACG-----GATGCTATCGATTCACCGGCCT 34929 | ||||||||||| || || |||||| |||| ||||| | || Sbjct 280073 ATGCCCTCCTTGTCCTGGATTTTGCTCTTGACGTTGTCGATGGTATCGGAAC-----TCT 280019 Query 34930 CAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTC 34985 | || || | || || || || || || ||||||||||| ||||||||||| ||| Sbjct 280018 CGACCTCCAAAGTGATCGTCTTCCCTGTCAGAGTCTTCACGAAGATCTGCATCTTC 279963 >seq4017 Length=874442 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| |||| |||| ||||| ||||| ||| || || || ||||| || || | Sbjct 472429 CCTCCTCTCAGTCTCAGAACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGCC 472370 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | | | |||| || ||||| || |||||||| || || || ||||||||| | || Sbjct 472369 AGCGTCCTTCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGA 472310 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | |||||||| || ||| || || || || | ||||| ||| | ||| Sbjct 472309 ATACCCTCCTTATCTTGAATTTTAGTCTTTAC--AT--TGTCGATGGTGTCAGAGCTCTC 472254 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || |||| ||| || || || ||||| | |||||| || |||||||||||| Sbjct 472253 CACCTCGAGGGTAATTGTCTTACCCGTCAAAGTCTTGACGAAGATCTGCATA 472202 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||| | | || | || | || ||| || ||||| |||||||| | Sbjct 473569 CCTCCCCTCAATCGTAGCACAAGATGCAAGGTAGATTCCTTTTGAATATTATAGTCTGCC 473510 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | | || |||| || ||||| || |||||||| || | ||| |||||||| | || Sbjct 473509 AAGGTACGACCATCCTCGAGCTGCTTACCGGCAAAGATCAATCGCTGCTGGTCGGGAGGA 473450 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGT-TTGACGGATGCTATCGATTCACCGGCCTCAAC 34933 | |||||||| || ||||| ||| || ||| | || | || | ||||| Sbjct 473449 ATACCCTCCTTATCCTGGATCTT-TGTCTTCACGTTGTCGATGGTATCTGAGCTTTCAAC 473391 Query 34934 ATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || ||||||||||| || | ||||| ||||||||||||||| Sbjct 473390 CTCCAAAGTGATGGTTTTTCCAGTCAATGTCTTGACAAAGATCTGCATA 473342 Score = 84.2 bits (92), Expect = 1e-11 Identities = 138/197 (70%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 |||||| || || || || |||| ||| ||||| |||| |||||||| ||||| ||||| Sbjct 473762 TTCTTTTTGGATATTGTAATCCGCCAGGGTTCGTCCATCTTCCAGCTGCTTTCCTGCAAA 473703 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || | || ||||| || | || | || |||||||| ||||| |||||| | Sbjct 473702 GATCAATCTCTGCTGATCGGGAGGAATTCCTTCCTTGTCCTGGATCTTGGTTTTGAC--A 473645 Query 34910 TGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | | ||||| ||| | || || |||| || || || || || || | |||| Sbjct 473644 T--TGTCGATGGTGTCAGAGCTTTCGACCTCGAGAGTGATAGTCTTCCCGGTCAAGGTCT 473587 Query 34966 TCACAAAGATCTGCATA 34982 |||| |||||||||||| Sbjct 473586 TCACGAAGATCTGCATA 473570 >seq4073 Length=488838 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| || | |||||||||||| |||| || ||| || || ||||| || |||| Sbjct 173457 CCTCCTCTGAGCCTCAAAACCAAATGAAGCGTCGATTCCTTTTGGATGTTGTAATCCGCC 173516 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| || ||||| || |||||||| || || | |||||||| | || Sbjct 173517 AGAGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 173576 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | |||||||||||| ||| || || || | |||| ||| | ||| || Sbjct 173577 ATCCCCTCCTTGTCCTGAATTTTGACCTTCACATTGTCGATCGTGTCAGAGCTCTCGACC 173636 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | || ||||| ||||| || | ||||| || || |||||||| Sbjct 173637 TCCAACGTGATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 173683 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || |||| ||||| ||||| || | || || ||||| ||||| || |||| Sbjct 173685 CCGCCTCTCAGTCTCAACACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCC 173744 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| || ||||| || |||||||| || | | |||||||| | || Sbjct 173745 AGAGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGG 173804 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | |||||||||||| |||||| ||| || || ||||||| || | ||| Sbjct 173805 ATCCCCTCCTTGTCTTGAATCTTAACTTTCAC--AT--TATCGATCGTATCGGAGCTCTC 173860 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || | || ||||| || ||||| || |||||||| || |||||||| Sbjct 173861 CACCTCCAACGTGATGGTCTTCCCCGTCAGCGTCTTCACGAATATCTGCAT 173911 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 ||||||||||||||||| || | ||| |||| |||| || || || || ||||| || Sbjct 172809 TCTTTCTGAATGTTATAATCTGCAAGAGTTCGCCCATCTTCGAGTTGCTTACCGGCGAAG 172868 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | | ||||| || | || | || |||||||| ||||||| |||||| Sbjct 172869 ATCAACCTCTGCTGATCGGGAGGAATACCTTCCTTGTCCTGAATCTTCGCTTTGAC---- 172924 Query 34911 GCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | | ||||| | ||| || ||| || || | || ||||| || || || || || || Sbjct 172925 GTTGTCGATGGTGTCCGAGCTCTCGACCTCCAGAGTGATGGTCTTGCCGGTCAGTGTTTT 172984 Query 34967 CACAAAGATCTGCATA 34982 ||| ||||| |||||| Sbjct 172985 CACGAAGATTTGCATA 173000 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 ||||||||||||||||| || | || |||| |||| || ||||| || ||||| || Sbjct 173037 TCTTTCTGAATGTTATAATCTGCCAGAGTTCGCCCATCTTCGAGCTGCTTACCGGCGAAG 173096 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | | |||||||| | || | || |||||||| ||||||| |||||| Sbjct 173097 ATCAACCTCTGCTGGTCGGGAGGAATACCTTCCTTGTCCTGAATCTTCGCTTTGAC---- 173152 Query 34911 GCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | | ||||| | ||| || ||| || || | || ||||| || || || | || || Sbjct 173153 GTTGTCGATGGTGTCCGAGCTCTCGACCTCCAGAGTGATGGTCTTGCCGGTCAATGTTTT 173212 Query 34967 CACAAAGATCTGCATA 34982 ||| ||||| |||||| Sbjct 173213 CACGAAGATTTGCATA 173228 >seq3072 Length=975934 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG-- 34812 || || |||| |||||| ||||| || | || ||| || || ||||| ||||| | Sbjct 271581 CCACCTCTCAGCCTCAACACCAAATGGAGGGTAGATTCGTTTTGGATGTTGTAGTCGGCC 271522 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 || | | || |||| || || || ||||||||||| || | | ||||| ||| | | Sbjct 271521 AACGTCCTCC--CATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAG 271464 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || |||||||| ||||||| ||| ||| | |||| ||| | ||| | Sbjct 271463 GGATGCCTTCCTTGTCCTGAATCTTCGTTTTCACGTTGTCAATCGTGTCAGAGCTCTCCA 271404 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | |||||||| || |||||||| | || || ||||| ||||| Sbjct 271403 CCTCAAGAGTTATGGTCTTGCCCGTGAGGGCTTTAACGAAGATTTGCAT 271355 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| ||| || || || ||||| |||| || ||| | |||| || Sbjct 272019 ACCAAGTGCAAAGTGGATTCCTTTTGGATATTATAATCCGCTAGAATTCTTCCATCCTCG 271960 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || || ||||| ||||| || | | ||||||||| | || | ||||||||||| | Sbjct 271959 AGTTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGA 271900 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| || ||| | || | || | |||||| || | || ||||| || Sbjct 271899 ATCTTCGTCTTCACGTTGTCGATAGTATCTGAGCTCTCAACCTCAAGAGTAATGGTCTTA 271840 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || | |||||||| || |||||||| Sbjct 271839 CCAGTCAAGGTCTTCACGAAAATCTGCAT 271811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324617232075336