Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq487 116 3e-21 seq4073 114 1e-20 seq2625 104 2e-17 seq4017 102 6e-17 seq3072 102 6e-17 >seq487 Length=466406 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||||||||| || ||| ||| ||||| || ||||| || | Sbjct 183008 CCTCCCCTGAGACGAAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCG 182949 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | ||| | || || | ||||||||| || || |||| || || ||||| | ||| Sbjct 182948 AGGGTACGACCATCTTCGAGCTGCTTACCAGCGAAGATCAATCTTTGCTGATCAGGAGGA 182889 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| ||| || | | || || || |||||| Sbjct 182888 ATGCCCTCCTTGTCCTGAATCTTAGCTTTAACGTTGTCGATAGTGTCGGAGCTCTCCACT 182829 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || |||||||| || |||| |||||||| || |||||||| Sbjct 182828 TCCAGAGTGATCGTTTTGCCGGTCAGCGTTTTTACGAAGATCTGCAT 182782 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || |||| ||||||||| || ||| ||| || || || ||||| || | Sbjct 177490 CCTCCCCTGAGACGCAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGCG 177431 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| |||| | || || | |||||| || || || ||||| | ||| || || | |||| Sbjct 177430 AGAGTTCGGCCATCTTCGAGCTGCTTTCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGA 177371 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| |||||| ||| ||| | | | | || || || ||| Sbjct 177370 ATCCCTTCCTTGTCCTGAATCTTAGCTTTCACATTATCGATCGTATCCGAGCTTTCTACC 177311 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || ||||| ||||| ||||||||||| || || || ||||| Sbjct 177310 TCAAGAGTGATCGTCTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 177264 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||||| ||| | ||| |||||||||||| |||||||| | || | ||| Sbjct 183550 AGACGCAACACCAGATGCAACGTCGACTCTTTTTGAATGTTGTAATCGGCCAGTGTACGA 183491 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| |||||| || || || |||| |||||| || || | |||| |||||| Sbjct 183490 CCATCTTCCAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCGGGAGGAATTCCCTCC 183431 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || ||| ||| | | | || || |||||| |||| || Sbjct 183430 TTGTCCTGGATTTTGGCTTTCACATTGTCGATGGTGTCAGAGCTCTCCACTTCCAGAGTG 183371 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| ||||||| ||| || || || || ||||| Sbjct 183370 ATGGTTTTCCCCGTCAGAGTCTTGACGAAGATTTGCAT 183333 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| | ||| | ||||||||| || ||| ||| ||||| || ||||| || | Sbjct 176806 CCTCCCCTCAACCGAAGCACCAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCA 176747 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| |||| |||| || | ||||||||||||||| ||||| | ||| || || | ||| Sbjct 176746 AGAGTTCGGCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCTGGAGGA 176687 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| ||| || ||| || | | | | || || || || Sbjct 176686 ATTCCCTCCTTGTCCTGAATTTTGGCTTTGACGTTATCAATGGTATCGGAGCTTTCTACT 176627 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || || || || || | ||||| |||||||||||||| Sbjct 176626 TCTAAAGTGATAGTCTTACCGGTGAGTGTTTTCACAAAAATCTGCAT 176580 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| | ||| | |||||| || || || ||| ||||| || ||||| || | Sbjct 176350 CCTCCCCTCAACCGAAGCACCAAGTGAAGAGTCGACTCCTTTTGGATGTTGTAGTCCGCG 176291 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| |||| |||| ||||| ||||| || || || ||||| | ||| || || | |||| Sbjct 176290 AGAGTTCGGCCGTCTTCCAATTGCTTGCCAGCGAAAATCAGCCTCTGCTGGTCTGGGGGA 176231 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| |||||| ||| || | | | || || ||||||| Sbjct 176230 ATTCCCTCCTTGTCCTGAATCTTAGCTTTCACGTTGTCGATGGTGTCGGAGCTCTCCACC 176171 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | || || || || || |||| ||| || || || ||||||||| Sbjct 176170 TCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATC 176123 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||||||||| || || ||| ||||| || ||||| || | Sbjct 177034 CCTCCCCTCAGACGAAGCACCAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCTGCG 176975 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || ||||||||||||||||| || |||| | ||| || || | ||| Sbjct 176974 AGGGTGCGGCCATCTTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCAGGGGGG 176915 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| ||||| ||| || | | || || || ||||||| Sbjct 176914 ATTCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATAGTGTCGGAGCTCTCCACC 176855 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || ||||| || |||| ||| || || || |||||||| Sbjct 176854 TCGAGGGTGATGGTTTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 176808 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||||||||| || ||| ||| ||||| || ||||| || | Sbjct 182552 CCTCCCCTGAGACGAAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCA 182493 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || |||| || | |||||| || || || |||| | ||| || || | |||| Sbjct 182492 AGGGTGCGGCCGTCTTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGA 182433 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| |||||| || ||| | | | | || || |||||| Sbjct 182432 ATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTATCGATGGTGTCGGAGCTTTCCACC 182373 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||| ||||| || || ||||| | || || || || ||||||||| Sbjct 182372 TCCAGAGTAATTGTCTTACCCGTGAGGGTCTTCACGAAGATCTGCATC 182325 >seq4073 Length=488838 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || |||| ||| |||||||| ||||| || ||||| || |||||||| | Sbjct 173457 CCTCCTCTGAGCCTCAAAACCAAATGAAGCGTCGATTCCTTTTGGATGTTGTAATCCGCC 173516 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | ||| | || || | |||||| |||||||| ||||| | ||| || || | ||| Sbjct 173517 AGAGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 173576 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| ||| || || ||| | | | || || ||| ||| Sbjct 173577 ATCCCCTCCTTGTCCTGAATTTTGACCTTCACATTGTCGATCGTGTCAGAGCTCTCGACC 173636 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||| ||| || || ||||| ||||| || || || |||||||||||| Sbjct 173637 TCCAACGTGATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCATC 173684 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| || || | |||||||||||| || || ||| || || || |||||||| | Sbjct 173685 CCGCCTCTCAGTCTCAACACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCC 173744 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | ||| | || || | |||||| |||||||| |||| | ||| || || | || Sbjct 173745 AGAGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGG 173804 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| |||||| ||| ||| | | | | || || ||||||| Sbjct 173805 ATCCCCTCCTTGTCTTGAATCTTAACTTTCACATTATCGATCGTATCGGAGCTCTCCACC 173864 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||| ||| || || || ||||||| || || || || ||||||||| Sbjct 173865 TCCAACGTGATGGTCTTCCCCGTCAGCGTCTTCACGAATATCTGCATC 173912 >seq2625 Length=346021 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| | | |||||||| ||| || ||| ||| ||||| || ||||| |||| Sbjct 281333 CCTCCCCTCAATCTCAACACCAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGCC 281274 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || |||| |||| |||||||||||||||||||| |||| ||||| ||||| | ||| Sbjct 281273 AGCGTTCGGCCGTCCTCCAACTGCTTACCGGCAAAAATCAACCGCTGCTGATCTGGTGGA 281214 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || ||||| || ||||| || || | | || || || || ||| Sbjct 281213 ATTCCTTCCTTATCTTGGATCTTAGTCTTCACGTTGTCGATAGTATCGGAGCTTTCAACC 281154 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || || || || | ||| || || ||||||||||| Sbjct 281153 TCCAGGGTGATAGTCTTCCCTGTAAGAGTCTTGACGAAAATCTGCAT 281107 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || |||| || |||||||| | || || ||||| || |||||||| | Sbjct 281561 CCTCCTCTCAGCCTCAGGACCAAATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGGCG 281502 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | ||| | || || | ||| || |||||||| |||| || ||| || || | ||| Sbjct 281501 AGTGTCCGACCATCTTCAAGCTGTTTCCCGGCAAAAATCAATCTCTGCTGGTCTGGAGGA 281442 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTT-ACAGAACCCACAGACTCTGACGCCTCCAC 48718 | ||||||||||| ||| ||| ||||| ||| | | | || || ||| || Sbjct 281441 ATTCCCTCCTTGTCTTGAAT-TTTGGTTTTCACATTGTCAATGGTGTCGGAACTCTCAAC 281383 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| |||||||| || || ||||| ||||| || ||||||||||| Sbjct 281382 CTCCAAAGTAATCGTCTTGCCAGTCAAGGTTTTGACGAAAATCTGCAT 281335 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| |||| ||| |||||||| || || ||| |||||||| ||||| || | Sbjct 282017 CCTCCCCTCAGCCTCAAGACCAAATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGCC 281958 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| |||| || | ||||| || ||||| |||| | ||| ||||| | || Sbjct 281957 AAGGTACGACCGTCCTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGG 281898 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||| |||||||| |||||| ||| || | | | || || ||||||| Sbjct 281897 ATGCCTTCCTTGTCCTGAATCTTCGTTTTCACGTTGTCAATCGTGTCAGAGCTCTCCACC 281838 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || || || || ||||| || || |||||||||||||| Sbjct 281837 TCAAGAGTGATGGTCTTACCGGTCAATGTCTTCACAAAAATCTGCAT 281791 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| || |||||||| || || |||||||| || | | ||| ||| | || || Sbjct 280175 ACCAAATGCAGAGTGCTCTCCTTCTGGATATTGTAGTCGGCCAAACTGCGACCATCCTCG 280116 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||||| ||||| || |||| ||||| || || | ||| | |||||||||||| Sbjct 280115 AGTTGCTTGCCGGCGAAAATCAACCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 280056 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 || || || || | | | || || ||| ||||||| || ||||| || Sbjct 280055 ATTTTGCTCTTGACGTTGTCGATGGTATCGGAACTCTCGACCTCCAAAGTGATCGTCTTC 279996 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || |||| ||| || || || ||||||||| Sbjct 279995 CCTGTCAGAGTCTTCACGAAGATCTGCATC 279966 >seq4017 Length=874442 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || | || |||| || || ||| ||| ||||| || |||||||||| Sbjct 472429 CCTCCTCTCAGTCTCAGAACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGCC 472370 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | | | || || | |||||| |||||||| ||||| ||||| || || | |||| Sbjct 472369 AGCGTCCTTCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGA 472310 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGT-TTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | |||||||| || ||| ||| || |||||| | | | || || |||||| Sbjct 472309 ATACCCTCCTTATCTTGAAT-TTTAGTCTTTACATTGTCGATGGTGTCAGAGCTCTCCAC 472251 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| | ||||| || || ||||||||||| || || || |||||||| Sbjct 472250 CTCGAGGGTAATTGTCTTACCCGTCAAAGTCTTGACGAAGATCTGCAT 472203 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || ||||||||||| || || | | | ||| | || || | ||||||||||||||| Sbjct 473533 TCCTTTTGAATATTATAGTCTGCCAAGGTACGACCATCCTCGAGCTGCTTACCGGCAAAG 473474 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| |||||| || || | |||| |||||||| || |||||| || || Sbjct 473473 ATCAATCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATCTTTGTCTTCACGTTG 473414 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | ||||| || ||||||| || || |||||||| ||||| || || ||| Sbjct 473413 TCGATGGTATCTGAGCTTTCAACCTCCAAAGTGATGGTTTTTCCAGTCAATGTCTTGACA 473354 Query 48756 AAAATCTGCAT 48766 || |||||||| Sbjct 473353 AAGATCTGCAT 473343 >seq3072 Length=975934 Score = 102 bits (112), Expect = 6e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| | | |||||||| || || ||| ||||||||| || ||||| || | | Sbjct 271129 CCTCCCCTCAATCTCAACACCAGGTGGAGGGTGGACTCTTTTTGGATGTTGTAGTCGGCT 271070 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || |||| |||||||||||||| ||||| |||| |||||| ||||| | ||| Sbjct 271069 AGCGTGCGGCCGTCCTCCAACTGCTTACCAGCAAAAATCAATCGCTGCTGATCTGGTGGA 271010 Query 48660 ACGCCCTCCTTGTC 48673 | ||||||||||| Sbjct 271009 ATTCCCTCCTTGTC 270996 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || | ||| || ||||| ||||| ||||| | |||| ||| Sbjct 272028 AGACGGAGCACCAAGTGCAAAGTGGATTCCTTTTGGATATTATAATCCGCTAGAATTCTT 271969 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||| || ||||| |||| | ||| || || | ||| | |||||| Sbjct 271968 CCATCCTCGAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGGGGGATTCCCTCC 271909 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || || | | || ||||| ||| ||||| | ||| Sbjct 271908 TTGTCTTGAATCTTCGTCTTCACGTTGTCGATAGTATCTGAGCTCTCAACCTCAAGAGTA 271849 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || ||||| || || || ||||||||||| Sbjct 271848 ATGGTCTTACCAGTCAAGGTCTTCACGAAAATCTGCAT 271811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380918393245251