Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq4073 118 2e-21 seq4017 118 2e-21 seq487 116 5e-21 seq2625 114 2e-20 seq3072 96.9 5e-15 >seq4073 Length=488838 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || |||||||| || || ||||| ||||| || ||| || Sbjct 173455 ATGCAGATTTTTGTCAAGACCTTGACTGGCAAGACCATTACTTTAGAGGTGGAAAGCTCC 173396 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||||| || ||||| || || |||||||| || ||||| || || Sbjct 173395 GACACGATCGACAACGTCAAGGCGAAAATCCAGGACAAAGAAGGAATCCCTCCTGATCAG 173336 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||| | ||||||||||||||||||||| ||||| | |||| |||||| Sbjct 173335 CAGAGGTTGATCTTCGCCGGTAAGCAGCTCGAAGATGGGCGAACTCTGGCAGACTATAAT 173276 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 ||| |||||| | || || ||| | ||| | | | ||||| ||| Sbjct 173275 ATACAGAAAGAGTCTACCCTGCATCTTGTGCTCCGTCTCAGAGGAGGT 173228 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | ||||||||||| || || || || || | || ||||| || Sbjct 173227 ATGCAAATCTTCGTGAAAACATTGACCGGCAAGACCATCACTCTGGAGGTCGAGAGCTCG 173168 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||||| ||| || || || || || ||||| || ||||| || || Sbjct 173167 GACACCATCGACAACGTCAAAGCGAAGATTCAGGACAAGGAAGGTATTCCTCCCGACCAG 173108 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||| | ||||||||||||||||||||| ||||| | |||||||||| Sbjct 173107 CAGAGGTTGATCTTCGCCGGTAAGCAGCTCGAAGATGGGCGAACTCTGGCAGATTATAAC 173048 Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026 || |||||| | || || ||| Sbjct 173047 ATTCAGAAAGAGTCCACCCTGCAT 173024 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| ||||| | || || |||| || || || || || || || || || || Sbjct 173911 ATGCAGATATTCGTGAAGACGCTGACGGGGAAGACCATCACGTTGGAGGTGGAGAGCTCC 173852 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || || |||||| ||| || ||||| || || || || ||||| || || Sbjct 173851 GATACGATCGATAATGTGAAAGTTAAGATTCAAGACAAGGAGGGGATCCCTCCTGACCAG 173792 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||| | |||||| ||||||||||| ||| | ||| | | ||||| || Sbjct 173791 CAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACTCTGGCGGATTACAAC 173732 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || || ||| |||| || ||||| ||||| ||| | |||||||| Sbjct 173731 ATCCAGAAGGAGTCGACTCTCCATTTGGTGTTGAGACTGAGAGGCGG 173685 Score = 95.1 bits (104), Expect = 2e-14 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || ||||||||||| || || || || || ||||| ||| Sbjct 173683 ATGCAGATTTTCGTCAAGACCTTGACTGGAAAGACCATCACGTTGGAGGTCGAGAGCTCT 173624 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || || ||||| ||||| || || || || || || ||||| || || Sbjct 173623 GACACGATCGACAATGTGAAGGTCAAAATTCAGGACAAGGAGGGGATTCCTCCTGACCAG 173564 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || |||| | |||||| ||||||||||| ||| | ||| | | ||||| || Sbjct 173563 CAGAGGCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACTCTGGCGGATTACAAC 173504 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| || ||||||||||||| || || || | ||||| ||| Sbjct 173503 AT--CCAAAAGGAATCGACGCTTCATTTGGTTTTGAGGCTCAGAGGAGGT 173456 Score = 89.7 bits (98), Expect = 8e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | |||||| |||| || || || || || | || ||||| || Sbjct 172999 ATGCAAATCTTCGTGAAAACACTGACCGGCAAGACCATCACTCTGGAGGTCGAGAGCTCG 172940 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||||| ||| || || || || || ||||| || ||||| || || Sbjct 172939 GACACCATCGACAACGTCAAAGCGAAGATTCAGGACAAGGAAGGTATTCCTCCCGATCAG 172880 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||| | ||||||||||| ||||||||| ||||| | |||||||||| Sbjct 172879 CAGAGGTTGATCTTCGCCGGTAAGCAACTCGAAGATGGGCGAACTCTTGCAGATTATAAC 172820 Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026 || |||||| | || || ||| Sbjct 172819 ATTCAGAAAGAGTCCACCCTGCAT 172796 >seq4017 Length=874442 Score = 118 bits (130), Expect = 2e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || ||||||||||||||||| || || || || || ||| || Sbjct 473343 ATGCAGATCTTTGTCAAGACATTGACTGGAAAAACCATCACTTTGGAGGTTGAAAGCTCA 473402 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || |||||||| | || || || ||||| || || || ||||| || || Sbjct 473403 GATACCATCGACAACGTGAAGACAAAGATCCAGGATAAGGAGGGTATTCCTCCCGACCAG 473462 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||||||| | |||||||||||||||||| ||| | || || |||| |||||| Sbjct 473463 CAGCGATTGATCTTTGCCGGTAAGCAGCTCGAGGATGGTCGTACCTTGGCAGACTATAAT 473522 Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||| || | || | ||| | ||| || |||| || || ||| Sbjct 473523 AT-TCAAAAGGAATCTACCTTGCATCTTGTGCTACGATTGAGGGGAGGT 473570 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || |||| || || ||||| || || || || || |||| Sbjct 472887 ATGCAGATTTTCGTGAAGACTCTGACAGGCAAGACTATAACCTTGGAGGTGGAGAGTTCT 472946 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || ||||| | |||||| |||||||| || || || |||||||| || Sbjct 472947 GACACTATCGACAATGTGAAGACTAAAATCCAAGATAAGGAGGGTATTCCTCCAGATCAG 473006 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||||||| | ||||| ||||||||||||||| || || | | || || | Sbjct 473007 CAGCGATTGATCTTCGCCGGCAAGCAGCTCGAAGATGGAAGGACCCTGGCCGACTACA-- 473064 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 | ||||||| ||| | || ||||| | || | || || ||||| ||| Sbjct 473065 ACATCCAAAAGGAGTCTACCCTTCACCTCGTCCTGAGGTTGAGAGGTGGT 473114 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || |||| || || || || || || || || || ||| Sbjct 473115 ATGCAGATTTTCGTGAAGACTCTGACAGGCAAGACCATCACCTTGGAGGTGGAGAGTTCC 473174 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || || ||||| | ||||| ||||| || |||||||| || ||||| || Sbjct 473175 GACACCATCGACAATGTGAAGACCAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAG 473234 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||||||| | || || || |||||||||||| ||| ||||| | || |||| Sbjct 473235 CAGCGATTGATCTTCGCTGGGAAACAGCTCGAAGATGGCAGGACTTTGGCCGACTATA-- 473292 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 | ||||||| ||| | || |||||| | ||||| | || ||||| ||| Sbjct 473293 ACATCCAAAAGGAGTCTACTCTTCATCTTGTGTTGCGGTTGAGAGGTGGT 473342 >seq487 Length=466406 Score = 116 bits (128), Expect = 5e-21 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | |||||| | || || || ||||| || |||||||| ||| || Sbjct 176580 ATGCAGATTTTTGTGAAAACACTCACCGGTAAGACTATCACTTTAGAAGTAGAAAGCTCC 176639 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| ||||| ||| ||||| || || || || || || |||||||| || Sbjct 176640 GATACCATTGATAACGTCAAAGCCAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 176699 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || |||| | |||||||||||||||||| || | ||||| | |||| || | Sbjct 176700 CAGAGGCTGATCTTTGCCGGTAAGCAGCTCGAGGACGGCCGAACTCTTGCAGACTACA-- 176757 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 | ||||||| ||| | || |||||||| ||| | | || || || ||| Sbjct 176758 ACATCCAAAAGGAGTCCACTCTTCATTTGGTGCTTCGGTTGAGGGGAGGT 176807 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | ||||| ||||||||||| || || || | || || ||| || Sbjct 177264 ATGCAAATCTTCGTCAAAACTTTGACTGGAAAGACGATCACTCTTGAGGTAGAAAGCTCG 177323 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || || |||||| ||| || || || || ||||| || || ||||| || Sbjct 177324 GATACGATCGATAATGTGAAAGCTAAGATTCAGGACAAGGAAGGGATTCCCCCAGACCAG 177383 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || |||| | || || ||||||||||||||| | ||||| | | || || || Sbjct 177384 CAGAGGCTGATCTTCGCTGGAAAGCAGCTCGAAGATGGCCGAACTCTCGCGGACTACAAC 177443 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 || || ||| | || || ||||| ||| Sbjct 177444 ATCCAGAAGGAGTCCACTCTCCATTTGGTG 177473 Score = 91.5 bits (100), Expect = 2e-13 Identities = 149/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || || | ||||| |||| || ||||| || || | ||||| || || Sbjct 182781 AATGCAGATCTTCGTAAAAACGCTGACCGGCAAAACGATCACTCTGGAAGTGGAGAGCTC 182840 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| ||||| ||| ||| || || || || || ||||| ||||| || || Sbjct 182841 CGACACTATCGACAACGTTAAAGCTAAGATTCAGGACAAGGAGGGCATTCCTCCTGATCA 182900 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 ||||||||||| | || |||||||||||||||||| | || | |||| || | Sbjct 182901 GCAAAGATTGATCTTCGCTGGTAAGCAGCTCGAAGATGGTCGTACCCTCGCAGACTACA- 182959 Query 156002 TATATCCAAA--GAGGCGACGCTTCATTTAGTG 156032 | ||||||| ||| | || || ||||| ||| Sbjct 182960 -ACATCCAAAAGGAGTCCACTCTCCATTTGGTG 182991 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/129 (75%), Gaps = 4/129 (3%) Strand=Plus/Plus Query 155906 TAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAA 155965 ||| || ||||| |||||||| || || ||||| || || ||| |||| | ||||| || Sbjct 177119 TAAGATTCAAGACAAAGAAGGAATTCCCCCAGACCAGCAGAGACTGATCTTCGCCGGCAA 177178 Query 155966 GCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA--GAGGCGACGCTT 156023 ||||||||||||| | ||||| | | || |||| | ||||||| ||| | || || Sbjct 177179 GCAGCTCGAAGATGGCCGAACTCTCGCGGACTATA--ACATCCAAAAGGAGTCCACTCTC 177236 Query 156024 CATTTAGTG 156032 ||||| ||| Sbjct 177237 CATTTGGTG 177245 >seq2625 Length=346021 Score = 114 bits (126), Expect = 2e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| |||||| | || || | || ||||| || || || || || |||||| || Sbjct 280879 ATGCAGATATTTGTGAAGACGCTTACAGGAAAGACCATCACCTTGGAGGTCGAAAGCTCC 280938 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||||| |||| || || |||||||| || || || |||||||| ||| Sbjct 280939 GACACCATCGACAACGTCAAAACCAAGATCCAAGATAAGGAGGGTATTCCTCCAGACCAA 280998 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||| | ||| ||||||||| | || || | |||| | | ||||||||| Sbjct 280999 CAGAGATTGATCTTTGCAGGTAAGCAGTTGGAGGACGGCCGAACGCTGGCCGATTATAAT 281058 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 ||| || ||| | || || ||| | || || ||||| || || ||| Sbjct 281059 ATACAGAAGGAGTCTACTCTCCATCTCGTCTTGAGATTGAGGGGAGGT 281106 Score = 95.1 bits (104), Expect = 2e-14 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || | || || || ||||| || | || || ||| || Sbjct 281107 ATGCAGATTTTCGTCAAGACTCTTACAGGGAAGACTATCACCCTGGAGGTTGAAAGCTCC 281166 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| |||||||| | ||| || |||||||| ||||| || || ||||| || Sbjct 281167 GATACTATCGACAACGTGAAGACTAAGATCCAAGATAAGGAAGGAATTCCACCAGATCAG 281226 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | ||||||| ||||||||||||| | || || | |||| | | || || | Sbjct 281227 CAGCGGTTGATTTTTGCCGGTAAGCAGTTGGAGGACGGCCGAACGCTGGCTGACTACA-- 281284 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 | ||||||| ||| | || || ||| | ||||| ||||| || || ||| Sbjct 281285 ACATCCAAAAGGAGTCCACTCTCCATCTGGTGTTGAGATTGAGGGGAGGT 281334 Score = 87.8 bits (96), Expect = 3e-12 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || || | || || ||||| || || || ||||| | || || || || Sbjct 282018 AATGCAGATTTTCGTGAAGACCTTGACAGGTAAGACCATTACTCTTGAGGTTGAGAGCTC 282077 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 |||| ||| |||||||| | || || ||||| || || || || || ||||| || Sbjct 282078 AGATACTATCGACAACGTGAAGACGAAGATTCAAGACAAGGAGGGAATCCCCCCAGACCA 282137 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || || ||||||| || || ||||| ||||| ||| |||| | || | ||||||| Sbjct 282138 GCAGAGGTTGATTTTCGCAGGAAAGCAACTCGAGGATGGAAGAATTCTAGCGGATTATA- 282196 Query 156002 TATATCCAAA 156011 ||||||||| Sbjct 282197 -ATATCCAAA 282205 >seq3072 Length=975934 Score = 96.9 bits (106), Expect = 5e-15 Identities = 136/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || || | || || |||||||| || || ||||| | || || || || Sbjct 271810 AATGCAGATTTTCGTGAAGACCTTGACTGGTAAGACCATTACTCTTGAGGTTGAGAGCTC 271869 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 |||| ||| |||||||| | || || ||||| || || || || || ||||| || Sbjct 271870 AGATACTATCGACAACGTGAAGACGAAGATTCAAGACAAGGAGGGAATCCCCCCAGACCA 271929 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || || ||||||| ||| || ||||| ||||| ||| |||| | || | ||||||| Sbjct 271930 GCAGAGGTTGATTTTTGCAGGAAAGCAACTCGAGGATGGAAGAATTCTAGCGGATTATA- 271988 Query 156002 TATATCCAAA 156011 ||||||||| Sbjct 271989 -ATATCCAAA 271997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731834153069200