Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq1789 82.4 3e-11 >seq1789 Length=711511 Score = 82.4 bits (90), Expect = 3e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 50113 GCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACTG 50172 |||||| | ||||||||||| | |||| ||| ||||||||| |||||||||| |||| Sbjct 470494 GCGGAGACAGGATTTGAACCTATGACCTCAAGGTTATGAGCCTTGCGAGCTACCAGACTG 470435 Query 50173 CTCTACTCCGCATTA 50187 ||||||||||| ||| Sbjct 470434 CTCTACTCCGCGTTA 470420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181594278402294