Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_023577.1 Length=51797 Score E Sequences producing significant alignments: (Bits) Value seq2905 84.2 7e-12 >seq2905 Length=1000 Score = 84.2 bits (92), Expect = 7e-12 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 32948 GTAGAACGTGGCCGAGGCGTGCTCCAGCACGCTCTCGTGACCGACCTCGAGGATGTGAGC 33007 ||||| | | | ||| ||||||| |||||| ||| |||||||| |||||||| Sbjct 562 GTAGACGGAGACGGAGCCGTGCTCGAGCACGGAGAGGTGCCCGACCTCCAGGATGTGGCG 621 Query 33008 GAGGTAGTCCTCGTTCTCCTGAGTGGCCGGGTTCGGCCGGTCGAACGACCGGTAGCAGTT 33067 || ||| |||||||| | || |||||||||| || ||||| |||||||| Sbjct 622 GATGTACCCCTCGTTCGTCGCCGTCTTCGGGTTCGGCTTGTTCCACGACTGGTAGCAGGC 681 Query 33068 GCGGCCTGCGAACTCCGCG 33086 |||||| |||||||||||| Sbjct 682 GCGGCCGGCGAACTCCGCG 700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 165620663174646