Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_023697.1 Length=48420 Score E Sequences producing significant alignments: (Bits) Value seq2509 82.4 2e-11 >seq2509 Length=1735 Score = 82.4 bits (90), Expect = 2e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 13715 GCGAACTGGAACGCGATTGCGCAGGGCGAATCAGGCGGCAACTGGCACATCAACACCGGC 13774 |||| |||| || | | || ||| |||| || ||||| ||||| ||| |||| ||| Sbjct 1324 GCGACCTGGGACCGGCTCGCCCAGTGCGAGTCCGGCGGGGACTGGGCGATCGACACGGGC 1383 Query 13775 AACGGCTACTACGGCGGTCTGCAGTTCAAGCAGTCGAGCTGGGAGGCTGCGGGCGGCACC 13834 |||||||||| ||| || ||||||||| | ||| | | ||||| ||| ||||||||| Sbjct 1384 AACGGCTACTCCGGTGGGCTGCAGTTCGACCAGGCCACCTGGGCGGCCTACGGCGGCACC 1443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154814794059308