Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq2625 161 2e-34 seq4073 156 8e-33 seq3072 156 8e-33 seq4017 154 3e-32 seq487 152 1e-31 >seq2625 Length=346021 Score = 161 bits (178), Expect = 2e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||| ||||| | || || | || |||||||| || ||||||||||||||||| | Sbjct 281107 TACCTCCCCTCAATCTCAAGACGAGATGGAGAGTAGACTCCTTCTGTATATTATAATCGG 281048 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || ||| ||||| || | || || || |||||||| | ||| ||||| ||||||| Sbjct 281047 CCAGCGTTCGGCCGTCCTCCAACTGCTTACCTGCAAAGATCAATCTCTGTTGGTCTGGAG 280988 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||||||||| ||||| | ||| || || || || || || ||| | Sbjct 280987 GAATACCCTCCTTATCTTGGATCTTGGTTTTGACGTTGTCGATGGTGTCGGAGCTTTCGA 280928 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || ||||| ||||| | |||||| |||||||||||||| Sbjct 280927 CCTCCAAGGTGATGGTCTTTCCTGTAAGCGTCTTCACAAATATCTGCAT 280879 Score = 161 bits (178), Expect = 2e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||||||||||| | ||| || || |||| |||||||| || || || || ||||| | Sbjct 281563 TACCTCCTCTCAGCCTCAGGACCAAATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGG 281504 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | ||| ||||| || ||||| || ||||| || | ||| || || ||||||| Sbjct 281503 CGAGTGTCCGACCATCTTCAAGCTGTTTCCCGGCAAAAATCAATCTCTGCTGGTCTGGAG 281444 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||| ||||| |||||||| || | ||| ||||| ||||| || || | || | Sbjct 281443 GAATTCCCTCCTTGTCTTGAATTTTGGTTTTCACATTGTCAATGGTGTCGGAACTCTCAA 281384 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||||||| ||||||||||| ||||| || || || || |||||||| Sbjct 281383 CCTCCAAAGTAATCGTCTTGCCAGTCAAGGTTTTGACGAAAATCTGCAT 281335 Score = 161 bits (178), Expect = 2e-34 Identities = 168/218 (77%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || ||||||| ||||||||| || || ||||||||||| | ||||||||| || Sbjct 282234 ACGGAGCACCAAGTGCAAAGTAGATTCCTTTTGGATATTATAATCCGCTAGAATTCTTCC 282175 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || ||||| ||||| || || || | || || || ||||| || ||||| ||||| Sbjct 282174 ATCCTCGAGTTGCTTTCCTGCGAAAATCAACCTCTGCTGGTCTGGGGGGATTCCCTCCTT 282115 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 ||||||||||| | || || || || || ||||| | || | || || || | ||| | Sbjct 282114 GTCTTGAATCTTCGTCTTCACGTTGTCGATAGTATC-TGAGCTCTCAACCTCAAGAGTAA 282056 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | ||||| |||||||| ||||| || || ||||||||| Sbjct 282055 TGGTCTTACCTGTCAAGGTCTTCACGAAAATCTGCATT 282018 Score = 134 bits (148), Expect = 3e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| |||| | || || || || || ||||| || || || || || || || | Sbjct 282017 CCTCCCCTCAGCCTCAAGACCAAATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGCC 281958 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | |||||| || ||||| ||||| ||||| || | || || ||||||||||| Sbjct 281957 AAGGTACGACCGTCCTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGG 281898 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762 || |||||||| || |||||||| | ||| || || |||||||| ||| || | || || Sbjct 281897 ATGCCTTCCTTGTCCTGAATCTTCGTTTTCACGTTGTCAATCGTGTCA-GAGCTCTCCAC 281839 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | ||| || ||||| || ||||| ||||| ||||| |||||||| Sbjct 281838 CTCAAGAGTGATGGTCTTACCGGTCAATGTCTTCACAAAAATCTGCAT 281791 Score = 129 bits (142), Expect = 1e-24 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||||| | || ||| || || || |||||||| || || || || || || | Sbjct 281791 TACCACCTCTCAGCCTCAAAACCAAATGGAGGGTAGATTCCTTTTGGATGTTGTAGTCGG 281732 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | || || || || ||||| ||||| ||||| || | || || |||||||||| Sbjct 281731 CCAACGTCCTCCCATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAG 281672 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760 | || |||||||| || |||||||| | ||| || || |||||||| ||| || | || Sbjct 281671 GGATGCCTTCCTTGTCCTGAATCTTCGTTTTCACGTTATCAATCGTGTCA-GAGCTCTCC 281613 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | |||||| |||||||| || | || || || || || ||||| Sbjct 281612 ACCTCAAGAGTTATGGTCTTGCCGGTGAGGGTTTTAACGAAGATTTGCAT 281563 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| ||||| | ||| || | |||||||| || ||||| || || || || || | Sbjct 280877 CCTCCCCTCAACCTCAGCACAAGATGCAGAGTCGACTCTTTTTGGATGTTGTAGTCCGCG 280818 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||| ||||| | || || || |||||||| | || || ||||||||||| Sbjct 280817 AGGGTACGACCATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGCTGATCTGGAGGG 280758 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||| ||||| || ||||| || | ||| || | ||||| || ||| ||| || Sbjct 280757 ATTCCCTCCTTGTCCTGAATTTTGGTTTTCACGATGTCAATTGTGTCAGAGCTTTCGACC 280698 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || || || || || | |||||| || || |||||||| Sbjct 280697 TCCAACGTGATGGTTTTCCCCGTGAGCGTCTTCACGAAGATCTGCAT 280651 Score = 113 bits (124), Expect = 9e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| ||||| | |||||| | || || || || |||||||| || || || || | Sbjct 280649 CCTCCCCTCAATCTCAGAACAAGATGAAGCGTGGACTCTTTCTGAATGTTGTAGTCGGCC 280590 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||||| ||||||||||| || || ||||| | || || |||||||| || Sbjct 280589 AGCGTCCGGCCGTCCTCTAGTTGTTTGCCGGCGAAGATCAACCTCTGCTGATCTGGGGGG 280530 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||| |||||||| || ||||| | || ||||| || || || ||| | || || Sbjct 280529 ATTCCCTCCTTATCCTGGATCTTAGTCTTGACATTGTCGATGGTGTCAGAACTCTCGACC 280470 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || || || || |||| || || || || || ||||| Sbjct 280469 TCGAGGGTAATGGTTTTCCCCGTCAGAGTTTTAACGAAAATTTGCAT 280423 Score = 111 bits (122), Expect = 3e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||||| || | || || | |||| ||| || ||||| || || || || || | Sbjct 280423 TACCTCCTCGCAGCCTCAACACAAGATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCGG 280364 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | ||||||||| |||||||| || || || || | | || || || || | Sbjct 280363 CCAGCGTGCGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCGCTGCTGGTCAGGGG 280304 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || |||||||||||||| || | || ||||| || ||||||||| ||| | Sbjct 280303 GAATGCCCTCCTTATCTTGAATTTTCGTCTTCACATTGTCGATCGTATCAGAGCTTTCGA 280244 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | ||| || ||||| || || | ||||| || || |||||||| Sbjct 280243 CCTCAAGAGTGATGGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 280195 Score = 111 bits (122), Expect = 3e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||| ||||| | || || | || ||||| || || || || || || || |||| Sbjct 281335 TACCTCCCCTCAATCTCAACACCAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAG 281276 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || ||| ||||| || | || || || ||||| || | | || |||||||| | Sbjct 281275 CCAGCGTTCGGCCGTCCTCCAACTGCTTACCGGCAAAAATCAACCGCTGCTGATCTGGTG 281216 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||||||||||||||| ||||| | || || || || || ||||| ||| | Sbjct 281215 GAATTCCTTCCTTATCTTGGATCTTAGTCTTCACGTTGTCGATAGTATCGGAGCTTTCAA 281156 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||| || || ||||| ||||| | ||||| || || |||||||| Sbjct 281155 CCTCCAGGGTGATAGTCTTCCCTGTAAGAGTCTTGACGAAAATCTGCAT 281107 >seq4073 Length=488838 Score = 156 bits (172), Expect = 8e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||||||||| | ||| || || | ||||| ||||| ||||||||||||||||| || | Sbjct 173227 TACCTCCTCTGAGACGGAGCACAAGATGCAGGGTAGACTCTTTCTGTATATTATAGTCTG 173286 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| ||| || ||||| || || || || || ||||| | || || ||||| |||| Sbjct 173287 CCAGAGTTCGCCCATCTTCGAGCTGCTTACCGGCGAAGATCAACCTCTGCTGATCAGGAG 173346 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | |||||||| || || || || || || || || || || ||||| || ||| | Sbjct 173347 GGATTCCTTCTTTGTCCTGGATTTTCGCCTTGACGTTGTCGATCGTGTCGGAGCTTTCCA 173406 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || ||||| || |||||||| ||||| ||||| ||||| |||||||| Sbjct 173407 CCTCTAAAGTAATGGTCTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 173455 Score = 138 bits (152), Expect = 2e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||||| | || || || || ||||| || || ||||| || || ||||| | Sbjct 173685 CCGCCTCTCAGTCTCAACACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCC 173744 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | ||| || || || || || || |||||||| | || || || || ||||| Sbjct 173745 AGAGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGG 173804 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762 || || ||||| ||||||||||| |||| ||||| || |||||||| || | || || Sbjct 173805 ATCCCCTCCTTGTCTTGAATCTTAACTTTCACATTATCGATCGTATC-GGAGCTCTCCAC 173863 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || ||||| || |||| |||||| || ||||||||||| Sbjct 173864 CTCCAACGTGATGGTCTTCCCCGTCAGCGTCTTCACGAATATCTGCAT 173911 >seq3072 Length=975934 Score = 156 bits (172), Expect = 8e-33 Identities = 167/218 (77%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || ||||||| ||| ||||| || || ||||||||||| | ||||||||| || Sbjct 272026 ACGGAGCACCAAGTGCAAAGTGGATTCCTTTTGGATATTATAATCCGCTAGAATTCTTCC 271967 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || ||||| ||||| ||||| || | || || || ||||| || ||||| ||||| Sbjct 271966 ATCCTCGAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGGGGGATTCCCTCCTT 271907 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 ||||||||||| | || || || || || ||||| | || | || || || | ||| | Sbjct 271906 GTCTTGAATCTTCGTCTTCACGTTGTCGATAGTATC-TGAGCTCTCAACCTCAAGAGTAA 271848 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | ||||| || ||||| ||||| || || ||||||||| Sbjct 271847 TGGTCTTACCAGTCAAGGTCTTCACGAAAATCTGCATT 271810 Score = 118 bits (130), Expect = 2e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| ||||||| | || || || || || |||||||| || || || || || || | Sbjct 271582 ACCACCTCTCAGCCTCAACACCAAATGGAGGGTAGATTCGTTTTGGATGTTGTAGTCGGC 271523 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | || || || || ||||| ||||| ||||| || | || || ||||||||||| Sbjct 271522 CAACGTCCTCCCATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAGG 271463 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTA 82761 || |||||||| || |||||||| | ||| || || |||||||| ||| || | || | Sbjct 271462 GATGCCTTCCTTGTCCTGAATCTTCGTTTTCACGTTGTCAATCGTGTCA-GAGCTCTCCA 271404 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | |||||| |||||||| || | | || || || || ||||| Sbjct 271403 CCTCAAGAGTTATGGTCTTGCCCGTGAGGGCTTTAACGAAGATTTGCAT 271355 Score = 96.9 bits (106), Expect = 7e-15 Identities = 159/227 (70%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||| | |||| | || || || || || ||||| || || || || || || | | Sbjct 271809 CCTTCCCTCAGCCTCAAGACCAAATGGAGGGTAGACTCCTTTTGGATGTTTTAGCCGGCC 271750 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | |||||| || ||||| || ||||| || |||| || || ||||| || Sbjct 271749 AAGGTACGACCGTCCTCAAGTTGCTTCCCAGCGAAAATTAAAAGCTGCTGGTCTGGTGGA 271690 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762 || || || |||||||||||||| | || || || |||||||| || || | || || Sbjct 271689 ATGCCCTCTTTATCTTGAATCTTGGTCTTCACGTTGTCAATCGTGTC-GGAGCTCTCAAC 271631 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCA 82809 || | ||| || ||||| || ||||| ||||| ||||| ||||||| Sbjct 271630 CTCAAGAGTGATGGTCTTACCGGTCAATGTCTTCACAAAAATCTGCA 271584 >seq4017 Length=874442 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||| || | |||||| | |||||||| |||||||| || ||||| ||||| | Sbjct 473798 ACCACCTCGCAGCCTCAGAACAAGATGCAGAGTTGATTCTTTTTGGATATTGTAATCCGC 473739 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || ||| || ||||| || || ||||| |||||||| | ||| || ||||| ||||| Sbjct 473738 CAGGGTTCGTCCATCTTCCAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGATCGGGAGG 473679 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 ||||||||||| || || ||||| | ||| ||||| || || || ||| ||| || Sbjct 473678 AATTCCTTCCTTGTCCTGGATCTTGGTTTTGACATTGTCGATGGTGTCAGAGCTTTCGAC 473619 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | ||| || ||||| || ||||| ||||| || || |||||||| Sbjct 473618 CTCGAGAGTGATAGTCTTCCCGGTCAAGGTCTTCACGAAGATCTGCAT 473571 Score = 138 bits (152), Expect = 2e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | ||| || | ||| || ||||| || || || || || || || | Sbjct 473115 TACCACCTCTCAACCTCAGGACGAGGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGG 473056 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | || || ||||| || || || || || ||||| | || || |||||||||| Sbjct 473055 CCAGGGTCCTTCCATCTTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGATCTGGAG 472996 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||||||||| || || | || ||||| || || || ||| | || | Sbjct 472995 GAATACCCTCCTTATCTTGGATTTTAGTCTTCACATTGTCGATAGTGTCAGAACTCTCCA 472936 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| ||||| ||||||||||||| ||||| || || |||||||| Sbjct 472935 CCTCCAAGGTTATAGTCTTGCCTGTCAGAGTCTTCACGAAAATCTGCAT 472887 Score = 138 bits (152), Expect = 2e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| |||| || | || |||||||| || || || || ||||| || | Sbjct 473343 TACCACCTCTCAACCGCAACACAAGATGAAGAGTAGACTCCTTTTGGATGTTATAGTCGG 473284 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | || || ||||| || ||||| ||||| ||||| | || || || ||||| | Sbjct 473283 CCAAAGTCCTGCCATCTTCGAGCTGTTTCCCAGCGAAGATCAATCGCTGCTGGTCTGGGG 473224 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| |||||||| || | || ||||| || || || || | || | Sbjct 473223 GAATGCCTTCCTTGTCTTGAATTTTGGTCTTCACATTGTCGATGGTGTCGGAACTCTCCA 473164 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || ||||||||||||| ||||| || || |||||||| Sbjct 473163 CCTCCAAGGTGATGGTCTTGCCTGTCAGAGTCTTCACGAAAATCTGCAT 473115 Score = 129 bits (142), Expect = 1e-24 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||||||||||| | |||||| | ||| || || || || || || || || ||||||| Sbjct 472431 TACCTCCTCTCAGTCTCAGAACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAG 472372 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | || || || || || || || || |||||||| || | || || ||||| | Sbjct 472371 CCAGCGTCCTTCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGG 472312 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760 | || || |||||||||||||| || | |||||||| || || || ||| || | || Sbjct 472311 GAATACCCTCCTTATCTTGAATTTTAGTCTTTACATTGTCGATGGTGTCA-GAGCTCTCC 472253 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | || || ||||| || ||||| ||||| || || |||||||| Sbjct 472252 ACCTCGAGGGTAATTGTCTTACCCGTCAAAGTCTTGACGAAGATCTGCAT 472203 Score = 129 bits (142), Expect = 1e-24 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | || || | ||| || ||||| || || || || || || || | Sbjct 472659 TACCACCTCTCAACCTCAACACGAGGTGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGG 472600 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| |||||||||| || || ||||| || || ||||| | | || || ||||| | Sbjct 472599 CCAGAGTTCTACCGTCCTCAAGCTGTTTACCTGCGAAGATCAAACGCTGCTGGTCTGGGG 472540 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||||||||| ||||| | || ||||| || || || || | || | Sbjct 472539 GAATACCCTCCTTATCTTGGATCTTAGTCTTCACATTATCGATGGTGTCGGAACTCTCAA 472480 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | ||| || ||||| |||||||||||||| || || || ||||| Sbjct 472479 CCTCGAGAGTAATGGTCTTTCCTGTCAACGTCTTGACGAAGATTTGCAT 472431 Score = 120 bits (132), Expect = 6e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||||||||||| | ||| || | || || || || || || || || || || || | Sbjct 472887 TACCTCCTCTCAGCCTCAGTACGAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGG 472828 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | || ||||| || || || || || || |||||||||| || || ||||||| Sbjct 472827 CAAGGGTCCTCCCGTCCTCAAGCTGCTTGCCTGCGAAGATTAGTCGCTGCTGGTCTGGAG 472768 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| ||||| || || | || ||||| || || || || | || | Sbjct 472767 GGATACCCTCCTTGTCTTGGATTTTGGTCTTCACATTGTCGATGGTGTCGGAACTCTCCA 472708 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || |||||||| ||||| ||||| || || |||||||| Sbjct 472707 CCTCCAAGGTGATGGTCTTGCCAGTCAATGTCTTCACGAAGATCTGCAT 472659 >seq487 Length=466406 Score = 152 bits (168), Expect = 1e-31 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||||||||||||||| ||||| || || ||||| ||||| || || || || || || | Sbjct 176580 TACCTCCTCTCAAACGAAGAACCAAATGGAGAGTTGATTCCTTTTGGATGTTGTAGTCCG 176521 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| ||| |||||||| | ||| || ||||| ||||| || || || || ||||| | Sbjct 176520 CAAGAGTTCGGCCGTCTTCCAATTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGG 176461 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||| ||||| || || ||||| || || || || || || || || ||| | Sbjct 176460 GAATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCAA 176401 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||||||| ||||||||||| || | ||||| || || || ||||| Sbjct 176400 CCTCCAAAGTGATCGTCTTGCCCGTGAGGGTCTTCACGAAGATTTGCAT 176352 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| |||| ||| || || || || |||||||| || ||||| || || || || | Sbjct 177718 CCTCCCCTCAGACGAAGCACCAAATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCTGCG 177659 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || || ||||| ||||| || || || || ||||| || Sbjct 177658 AGGGTGCGGCCATCTTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGA 177599 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| || |||||||| || || ||||| || |||||||| |||||| Sbjct 177598 ATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTATCGATCGTATCCGAGCTTTCTACC 177539 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| ||| || |||||||| |||| ||||| || || || ||||| Sbjct 177538 TCCAGAGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 177492 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| ||||| || || || ||||| || || || || ||||| || || ||||| | Sbjct 182324 CCTCCCCTCAACCGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCTGCA 182265 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | |||||||| || || |||||||||||||| | || || || || || || Sbjct 182264 AGGGTGCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGG 182205 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||| |||||||| |||||||| || || ||||| || || ||||| | || || Sbjct 182204 ATTCCCTCCTTATCCTGAATCTTGGCCTTCACATTGTCGATGGTATCGCTGCTCTCGACC 182145 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || ||||| || |||| |||||| ||||| |||||||| Sbjct 182144 TCGAGCGTGATGGTCTTTCCCGTCAGCGTCTTCACAAAGATCTGCAT 182098 Score = 134 bits (148), Expect = 3e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||| || | ||| || || || || ||||| || || || || || ||||| || | Sbjct 177264 TACCTCCCCTGAGACGAAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTATAGTCCG 177205 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| ||| || ||||| || || || || || ||||| ||||| || || ||||| | Sbjct 177204 CGAGAGTTCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAGTCTCTGCTGGTCTGGGG 177145 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | |||||||| || ||||||||||| || || ||||| || || || || ||| | Sbjct 177144 GAATTCCTTCTTTGTCTTGAATCTTAGCCTTGACATTATCGATGGTGTCGGAGCTTTCCA 177085 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||| ||| || ||||| || || | ||||| || || |||||||| Sbjct 177084 CCTCCAGAGTAATTGTCTTACCCGTGAGGGTCTTCACGAAGATCTGCAT 177036 Score = 116 bits (128), Expect = 7e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||||||||| || || || || ||||| || || || || || || || || | Sbjct 182780 CCTCCTCTCAAACGGAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCG 182721 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | || ||||| || || || ||||| ||||| || || || || ||||| || Sbjct 182720 AGAGTGCGGCCATCTTCGAGCTGCTTACCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGA 182661 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| || || || ||||| || || || || | || || ||| || Sbjct 182660 ATCCCTTCCTTGTCCTGGATTTTTGCCTTCACGTTGTCCACGGTGTCGGAGCTTTCCACC 182601 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | ||| |||||||| ||||| | ||||| || || || ||||| Sbjct 182600 TCGAGAGTGATCGTCTTTCCTGTGAGGGTCTTCACGAAGATTTGCAT 182554 Score = 105 bits (116), Expect = 1e-17 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||||||||| || || || || |||||||| || ||||| || || || || | Sbjct 183331 CCTCCTCTCAAACGGAGCACCAAATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCTGCG 183272 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || || ||||| ||||| || || || || ||||| || Sbjct 183271 AGCGTGCGGCCATCTTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGA 183212 Query 82704 ATTCCTTCCTTATCTTGAATCTT 82726 ||||||||||| || |||||||| Sbjct 183211 ATTCCTTCCTTGTCCTGAATCTT 183189 Score = 100 bits (110), Expect = 6e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || ||||| || || || ||||| ||||| || || || || ||||| || ||||||||| Sbjct 183167 CCATCTTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGAATTCCTTCC 183108 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 || || |||||||| || || ||||| || ||||| || ||| || |||| ||| Sbjct 183107 TTGTCCTGAATCTTGGCCTTCACATTATCGATCGTGTCCGAGCTTTCCACCTCCAGAGTG 183048 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| || |||| || || || || || ||||| Sbjct 183047 ATGGTCTTTCCGGTCAGAGTTTTGACGAAGATTTGCAT 183010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981775157942443