Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq487 118 7e-22 seq2625 116 2e-21 seq3072 104 2e-17 seq4017 102 5e-17 seq4073 89.7 3e-13 >seq487 Length=466406 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||||||||| | ||||||||| |||||| ||| ||||| |||||||| || | | Sbjct 182780 CCTCCTCTCAAACGGAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCG 182721 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || || | || || || || || |||| | |||||| ||| | || Sbjct 182720 AGAGTGCGGCCATCTTCGAGCTGCTTACCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGA 182661 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGT-CACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| ||||| || | || | || |||||||||| |||||| Sbjct 182660 ATCCCTTCCTTGTCCTGGATTTT-TGCCTTCACGTTGTCCACGGTGTCGGAGCTTTCCAC 182602 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | |||||||| || ||||| | || || || ||||| |||||| Sbjct 182601 CTCGAGAGTGATCGTCTTTCCTGTGAGGGTCTTCACGAAGATTTGCATA 182553 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || || | ||| | ||||||||| |||||| ||| ||||| |||||||| || | Sbjct 183009 ACCTCCCCTGAGACGAAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGC 182950 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || || | || || || || || ||||| | |||||||| | || Sbjct 182949 GAGGGTACGACCATCTTCGAGCTGCTTACCAGCGAAGATCAATCTTTGCTGATCAGGAGG 182890 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| ||| || ||| ||| | ||| | |||||| |||| Sbjct 182889 AATGCCCTCCTTGTCCTGAATCTTAGCTTT-AACGTTGTCGATAGTGTCGGAGCTCTCCA 182831 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||||||||| || || | ||||||||| ||||||||||| Sbjct 182830 CTTCCAGAGTGATCGTTTTGCCGGTCAGCGTTTTTACGAAGATCTGCAT 182782 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || ||||| || | |||||| || ||||| ||| ||||| |||||||| || | | Sbjct 176350 CCTCCCCTCAACCGAAGCACCAAGTGAAGAGTCGACTCCTTTTGGATGTTGTAGTCCGCG 176291 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || |||| |||||||| || || || ||||||| | |||||| ||| | || Sbjct 176290 AGAGTTCGGCCGTCTTCCAATTGCTTGCCAGCGAAAATCAGCCTCTGCTGGTCTGGGGGA 176231 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| ||| || ||||| | | ||| | ||||||| ||||| Sbjct 176230 ATTCCCTCCTTGTCCTGAATCTTAGCTTTCA-CGTTGTCGATGGTGTCGGAGCTCTCCAC 176172 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | || || || ||||||||||| Sbjct 176171 CTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 176124 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || ||||| || | |||||| || || ||| ||| || || ||||||||||| | Sbjct 182324 CCTCCCCTCAACCGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCTGCA 182265 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| || | || ||||| ||||| ||||| | |||||| || | || Sbjct 182264 AGGGTGCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGG 182205 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || || || ||| || ||| |||| ||| | ||| ||||| || || Sbjct 182204 ATTCCCTCCTTATCCTGAATCTTGGCCTTC-ACATTGTCGATGGTATCGCTGCTCTCGAC 182146 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | |||||| || || || || | ||| || |||||||||||||| Sbjct 182145 CTCGAGCGTGATGGTCTTTCCCGTCAGCGTCTTCACAAAGATCTGCAT 182098 Score = 100 bits (110), Expect = 2e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || |||| || ||| ||||||| ||| | || ||||||||| ||||||||||||| Sbjct 183559 CCTCCTCGCAGACGCAACACCAGATGCAACGTCGACTCTTTTTGAATGTTGTAATCGGCC 183500 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||| || | || |||| || || || || || ||||| |||||||| || | || Sbjct 183499 AGTGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCGGGAGGA 183440 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTC 33698 | || || ||||| ||||| |||| |||| ||| | |||||| ||| || Sbjct 183439 ATTCCCTCCTTGTCCTGGATTTTGGCTTTC-ACATTGTCGATGGTGTCAGAGCT---CTC 183384 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| || | ||||| ||||| || || | || || || ||||| ||||| Sbjct 183383 CACTTCCAGAGTGATGGTTTTCCCCGTCAGAGTCTTGACGAAGATTTGCAT 183333 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || |||| ||| | ||||||||| ||||| ||| ||||| |||||||| || | Sbjct 177035 ACCTCCCCTCAGACGAAGCACCAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCTGC 176976 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || ||||| || || ||||| || ||||| | |||||| || | || Sbjct 176975 GAGGGTGCGGCCATCTTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCAGGGGG 176916 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || || ||| | | | ||| | |||||| |||| Sbjct 176915 GATTCCCTCCTTGTCCTGGATCTTGGCTTTGA-CGTTGTCGATAGTGTCGGAGCTCTCCA 176857 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| ||||| || || | || || || |||||||||||| Sbjct 176856 CCTCGAGGGTGATGGTTTTGCCAGTCAGAGTCTTGACGAAGATCTGCATA 176807 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || || | ||| | ||||||||| |||||| ||| ||||| |||||||| || | Sbjct 182553 ACCTCCCCTGAGACGAAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGC 182494 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | || ||||| || || ||||| | |||||| || | || Sbjct 182493 AAGGGTGCGGCCGTCTTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCAGGGGG 182434 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| ||| || |||| ||| || | ||||||| ||||| Sbjct 182433 AATTCCCTCCTTGTCCTGAATCTTGGCCTTCA-CATTATCGATGGTGTCGGAGCTTTCCA 182375 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || || ||||| || | || || || ||||||||||| Sbjct 182374 CCTCCAGAGTAATTGTCTTACCCGTGAGGGTCTTCACGAAGATCTGCAT 182326 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || ||||| || | ||||| ||| || ||| || || || |||||||| |||| Sbjct 176122 CCTCCCCTCAACCGAAGCACCAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGCA 176063 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || |||||| |||| || | ||| || ||||| || |||| | |||||| || | || Sbjct 176062 AGGGTGCGTCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCAGGAGGA 176003 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| |||||| |||| ||| ||| | ||| || || || || Sbjct 176002 ATTCCCTCCTTGTCCTGAATTTTAACCTTCA-CATTGTCGATGGTATCACTGCTCTCGAC 175944 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | |||||| || || || || | || || || ||||||||||| Sbjct 175943 CTCGAGCGTGATGGTCTTCCCCGTCAGAGTCTTCACGAAGATCTGCAT 175896 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || || | ||| | ||||||||| |||||| ||| ||||| ||||| || || | Sbjct 177263 ACCTCCCCTGAGACGAAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTATAGTCCGC 177204 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || || | || || ||||| || |||| | |||||| ||| | || Sbjct 177203 GAGAGTTCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAGTCTCTGCTGGTCTGGGGG 177144 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| ||| || | | |||| || | ||||||| ||||| Sbjct 177143 AATTCCTTCTTTGTCTTGAATCTT-AGCCTTGACATTATCGATGGTGTCGGAGCTTTCCA 177085 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || ||||| || | || || || |||||||||||| Sbjct 177084 CCTCCAGAGTAATTGTCTTACCCGTGAGGGTCTTCACGAAGATCTGCATA 177035 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||||||||| | |||||||| ||||| || ||||| |||||||| || | Sbjct 176579 ACCTCCTCTCAAACGAAGAACCAAATGGAGAGTTGATTCCTTTTGGATGTTGTAGTCCGC 176520 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || |||| |||||||| || || || || |||| | |||||| ||| | || Sbjct 176519 AAGAGTTCGGCCGTCTTCCAATTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGG 176460 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || || ||| || | ||| | ||||||| ||| | Sbjct 176459 AATTCCCTCCTTGTCCTGGATCTTGGCCTTC-ACGTTGTCGATGGTGTCGGAGCTTTCAA 176401 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | |||||||| || || || | || || || ||||| ||||| Sbjct 176400 CCTCCAAAGTGATCGTCTTGCCCGTGAGGGTCTTCACGAAGATTTGCAT 176352 >seq2625 Length=346021 Score = 116 bits (128), Expect = 2e-21 Identities = 175/244 (72%), Gaps = 10/244 (4%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || || || |||| | || |||||||| || || ||| ||||| ||| Sbjct 282029 AAAATCTGCATTCCTCCCCTCAGCCTCAAGACCAAATGGAGGGTAGACTCCTTTTGAATG 281970 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 ||||| |||| | || || |||| || | ||| ||||| ||||||||||| | |||| Sbjct 281969 TTGTAGTCGGCCAAGGTACGACCGTCCTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGC 281910 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 |||||| | || | ||||| ||||| ||| ||| |||| || | ||| | ||||| Sbjct 281909 TGATCTGGAGGGATGCCTTCCTTGTCCTGAATCTTC-GTTTTCACGTTGTCAATCGTGTC 281851 Query 33690 ---GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTG 33746 ||| ||||| |||| ||||| || ||||| || || || || ||||| ||||| Sbjct 281850 AGAGCT---CTCCACCTCAAGAGTGATGGTCTTACCGGTCAATGTCTTCACAAAAATCTG 281794 Query 33747 CATA 33750 |||| Sbjct 281793 CATA 281790 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||||| | | |||||||| | || || ||||| ||||||||||||| Sbjct 281562 ACCTCCTCTCAGCCTCAGGACCAAATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGGC 281503 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 |||||| || | || || | ||||| |||||||||||||| | |||||| ||| | || Sbjct 281502 GAGTGTCCGACCATCTTCAAGCTGTTTCCCGGCAAAAATCAATCTCTGCTGGTCTGGAGG 281443 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| |||||| |||| |||| ||| | ||||||| || | Sbjct 281442 AATTCCCTCCTTGTCTTGAATTTT-GGTTTTCACATTGTCAATGGTGTCGGAACTCTCAA 281384 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || ||||| || || || || ||||| || || ||||||||| Sbjct 281383 CCTCCAAAGTAATCGTCTTGCCAGTCAAGGTTTTGACGAAAATCTGCATA 281334 Score = 109 bits (120), Expect = 4e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || ||||| | | ||| | ||| ||||| ||||||||| |||||||| || | | Sbjct 280877 CCTCCCCTCAACCTCAGCACAAGATGCAGAGTCGACTCTTTTTGGATGTTGTAGTCCGCG 280818 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || ||||| || || || ||||| ||||| | |||||||||| | || Sbjct 280817 AGGGTACGACCATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGCTGATCTGGAGGG 280758 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTC---GCTTGATTC 33698 | || || ||||| |||||| ||||| || |||| ||||| |||| || Sbjct 280757 ATTCCCTCCTTGTCCTGAATTTTGGTTTTCACGAT-GTCAATTGTGTCAGAGCTT---TC 280702 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | |||||| ||||| || || | ||| || || ||||||||||| Sbjct 280701 GACCTCCAACGTGATGGTTTTCCCCGTGAGCGTCTTCACGAAGATCTGCAT 280651 Score = 105 bits (116), Expect = 4e-18 Identities = 165/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| |||| || | ||||| | ||| | |||| ||||||||| |||||||| |||| Sbjct 280422 ACCTCCTCGCAGCCTCAACACAAGATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCGGC 280363 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | |||||| ||||| |||||||| |||||||| || | || Sbjct 280362 CAGCGTGCGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCGCTGCTGGTCAGGGGG 280303 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATT 33697 | || || || || ||||||| |||| ||| ||| | || || |||| | Sbjct 280302 AATGCCCTCCTTATCTTGAATTTTCGTCTTCA-CATTGTCGATCGTATCAGAGCTT---T 280247 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || |||| ||||| || || || || | || || || ||||||||||| Sbjct 280246 CGACCTCAAGAGTGATGGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 280195 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || ||||| | ||||||| ||| |||||| ||| ||||| |||||||| || | Sbjct 281334 ACCTCCCCTCAATCTCAACACCAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGC 281275 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || |||| ||||| || || |||||||||||||| |||||||||||| | || Sbjct 281274 CAGCGTTCGGCCGTCCTCCAACTGCTTACCGGCAAAAATCAACCGCTGCTGATCTGGTGG 281215 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| || || || || || | || | ||| | || ||| ||| | Sbjct 281214 AATTCCTTCCTTATCTTGGATCTT-AGTCTTCACGTTGTCGATAGTATCGGAGCTTTCAA 281156 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || ||||| | || || || || ||||||||| Sbjct 281155 CCTCCAGGGTGATAGTCTTCCCTGTAAGAGTCTTGACGAAAATCTGCATA 281106 Score = 100 bits (110), Expect = 2e-16 Identities = 162/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||||| | || |||||||| || || || ||||| |||||||| |||| Sbjct 281790 ACCACCTCTCAGCCTCAAAACCAAATGGAGGGTAGATTCCTTTTGGATGTTGTAGTCGGC 281731 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || || | ||| ||||||||||||||||| | |||||||||| | || Sbjct 281730 CAACGTCCTCCCATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAGG 281671 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTC---GCTTGATTC 33698 | ||||| ||||| ||| ||| ||||| || | ||||| ||| || Sbjct 281670 GATGCCTTCCTTGTCCTGAATCTTCGTTTTCACGTTATCAATCGTGTCAGAGCT---CTC 281614 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 ||| |||| || || || || || || | ||||| || ||||| |||||| Sbjct 281613 CACCTCAAGAGTTATGGTCTTGCCGGTGAGGGTTTTAACGAAGATTTGCATA 281562 Score = 87.8 bits (96), Expect = 1e-12 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| ||||||||||| || || || ||||| |||| | |||| | || || Sbjct 280175 ACCAAATGCAGAGTGCTCTCCTTCTGGATATTGTAGTCGGCCAAACTGCGACCATCCTCG 280116 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGT-CGGC 33659 | ||| || ||||| |||||||| |||||||| || | || | || || |||| | | Sbjct 280115 AGTTGCTTGCCGGCGAAAATCAACCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 280056 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 | ||| || || || | ||| | ||| ||| || || || | |||||||| | Sbjct 280055 ATTTTGCTCTT--GACGTTGTCGATGGTATCGGAACTCTCGACCTCCAAAGTGATCGTCT 279998 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | ||||| | || || || ||||||||||| Sbjct 279997 TCCCTGTCAGAGTCTTCACGAAGATCTGCAT 279967 >seq3072 Length=975934 Score = 104 bits (114), Expect = 2e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || ||||| | ||||||| || || ||| ||||||||| |||||||| |||| Sbjct 271130 ACCTCCCCTCAATCTCAACACCAGGTGGAGGGTGGACTCTTTTTGGATGTTGTAGTCGGC 271071 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| ||||| || || || ||||||||||| |||||||||||| | || Sbjct 271070 TAGCGTGCGGCCGTCCTCCAACTGCTTACCAGCAAAAATCAATCGCTGCTGATCTGGTGG 271011 Query 33642 CACACCTTCTTTGTC 33656 | || || ||||| Sbjct 271010 AATTCCCTCCTTGTC 270996 Score = 104 bits (114), Expect = 2e-17 Identities = 165/233 (71%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||||||||||| | ||||||||||| || || || ||||| |||||||| |||| Sbjct 271583 CACCACCTCTCAGCCTCAACACCAAATGGAGGGTAGATTCGTTTTGGATGTTGTAGTCGG 271524 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || | | || || | ||| ||||||||||||||||| | |||||||||| | | Sbjct 271523 CCAACGTCCTCCCATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAG 271464 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGAT 33696 | | ||||| ||||| ||| ||| |||| || | ||| | ||||| ||| Sbjct 271463 GGATGCCTTCCTTGTCCTGAATCTTC-GTTTTCACGTTGTCAATCGTGTCAGAGCT---C 271408 Query 33697 TCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| |||| || || || || || || | | ||| || ||||| ||||| Sbjct 271407 TCCACCTCAAGAGTTATGGTCTTGCCCGTGAGGGCTTTAACGAAGATTTGCAT 271355 Score = 95.1 bits (104), Expect = 8e-15 Identities = 135/188 (72%), Gaps = 3/188 (2%) Strand=Plus/Minus Query 33563 TTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCA 33622 |||| |||| |||||||| |||||| || | || || | ||||| ||||||||||||| Sbjct 271314 TTTGGATGTAGTAATCGGCGAGTGTCCGACCATCTTCAAGCTGTTTCCCGGCAAAAATCA 271255 Query 33623 AACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCA 33682 | |||||| ||| | | | || || ||||| |||||| |||| |||| || Sbjct 271254 ATTTCTGCTGGTCTAGAAGAATTCCCTCCTTGTCTTGAATTTT-GGTTTTCACATTGT-- 271198 Query 33683 CGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGA 33742 || ||||| || || || |||||||| ||||| || || ||||| || |||| Sbjct 271197 CGATGTCGGAACTCTCAACCTCCGAAGTGATCGTCTTACCAGTCAAGGTTTTGACGAAGA 271138 Query 33743 TCTGCATA 33750 |||||||| Sbjct 271137 TCTGCATA 271130 >seq4017 Length=874442 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| || ||||| | ||| ||||| ||| ||||| ||||| || |||| Sbjct 473342 ACCACCTCTCAACCGCAACACAAGATGAAGAGTAGACTCCTTTTGGATGTTATAGTCGGC 473283 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || || | ||||| || || || ||||| |||||||| ||| | || Sbjct 473282 CAAAGTCCTGCCATCTTCGAGCTGTTTCCCAGCGAAGATCAATCGCTGCTGGTCTGGGGG 473223 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| |||||| || | |||| ||| | ||||||| |||| Sbjct 473222 AATGCCTTCCTTGTCTTGAATTTT-GGTCTTCACATTGTCGATGGTGTCGGAACTCTCCA 473164 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || ||||| | || || || || ||||||||| Sbjct 473163 CCTCCAAGGTGATGGTCTTGCCTGTCAGAGTCTTCACGAAAATCTGCATA 473114 Score = 95.1 bits (104), Expect = 8e-15 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||||| | | |||| || || ||| ||| ||||| ||||||||||| | Sbjct 472430 ACCTCCTCTCAGTCTCAGAACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGC 472371 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | | || || | || || |||||||| |||| ||||||||| ||| | || Sbjct 472370 CAGCGTCCTTCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGG 472311 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATT 33697 | ||| || || || |||||| || | |||| ||| | |||||| ||| | Sbjct 472310 AATACCCTCCTTATCTTGAATTTT-AGTCTTTACATTGTCGATGGTGTCAGAGCT---CT 472255 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| || | || || || ||||| || || || || || |||||||||||| Sbjct 472254 CCACCTCGAGGGTAATTGTCTTACCCGTCAAAGTCTTGACGAAGATCTGCATA 472202 Score = 95.1 bits (104), Expect = 8e-15 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| || | | || | ||| ||||| |||||||| || |||||||| | Sbjct 473798 ACCACCTCGCAGCCTCAGAACAAGATGCAGAGTTGATTCTTTTTGGATATTGTAATCCGC 473739 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || ||| | || |||| || ||||| ||||| ||||| | ||||||||| | || Sbjct 473738 CAGGGTTCGTCCATCTTCCAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGATCGGGAGG 473679 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATT 33697 | ||||| ||||| || || |||| |||| ||| | |||||| |||| | Sbjct 473678 AATTCCTTCCTTGTCCTGGATCTTG-GTTTTGACATTGTCGATGGTGTCAGAGCTT---T 473623 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || | ||||| || || || || || || || || |||||||||||| Sbjct 473622 CGACCTCGAGAGTGATAGTCTTCCCGGTCAAGGTCTTCACGAAGATCTGCATA 473570 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | ||||| | || || || ||| ||||| |||||||| |||| Sbjct 472658 ACCACCTCTCAACCTCAACACGAGGTGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGC 472599 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| || | ||||| || || || |||||||||||||| ||| | || Sbjct 472598 CAGAGTTCTACCGTCCTCAAGCTGTTTACCTGCGAAGATCAAACGCTGCTGGTCTGGGGG 472539 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || || || || || || | |||| || | ||||||| || | Sbjct 472538 AATACCCTCCTTATCTTGGATCTT-AGTCTTCACATTATCGATGGTGTCGGAACTCTCAA 472480 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || || ||||| ||||| || || ||||| |||||| Sbjct 472479 CCTCGAGAGTAATGGTCTTTCCTGTCAACGTCTTGACGAAGATTTGCATA 472430 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| |||| | || ||||| || | || ||| ||||| ||||| ||||| | Sbjct 472202 ACCACCCCTCAGTCTCAAGACCAAGTGCAATGTAGACTCCTTTTGGATGTTATAATCAGC 472143 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| | | || || | ||| || ||||| ||||||| | |||||| || | || Sbjct 472142 CAATGTCCTCCCATCCTCGAGTTGCTTGCCGGCGAAAATCAGCCTCTGCTGGTCGGGAGG 472083 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| ||| || || | ||||| ||| | || ||| ||| | Sbjct 472082 AATACCCTCCTTGTCCTGAATCTTG-GTCTTAACATTGTCGATCGTATCGGAGCTTTCGA 472024 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| ||||| || || || || || || || |||||||||||||| Sbjct 472023 CCTCAAGAGTGATGGTCTTCCCCGTCAATGTCTTCACAAAGATCTGCAT 471975 >seq4073 Length=488838 Score = 89.7 bits (98), Expect = 3e-13 Identities = 166/240 (69%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || || ||||||| | ||||||||||| ||||| ||| || || ||| Sbjct 173673 AAAATCTGCATCCCGCCTCTCAGTCTCAACACCAAATGGAGAGTCGACTCCTTCTGGATG 173732 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| | || ||||| | || || | || || |||||||| ||||| | |||| Sbjct 173733 TTGTAATCCGCCAGAGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGC 173792 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || || | || | || || ||||| ||| || |||| |||| || | || || Sbjct 173793 TGGTCAGGAGGGATCCCCTCCTTGTCTTGAATCTTAACTTTC-ACATTATCGATCGTATC 173851 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | ||||| || | |||||| || || || || | ||| || || || |||||||| Sbjct 173852 GGAGCTCTCCACCTCCAACGTGATGGTCTTCCCCGTCAGCGTCTTCACGAATATCTGCAT 173911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328687426847040