Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq4017 141 2e-28 seq2625 127 5e-24 seq487 127 5e-24 seq4073 113 1e-19 seq3072 91.5 3e-13 >seq4017 Length=874442 Score = 141 bits (156), Expect = 2e-28 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || ||||| || || ||||| ||||| ||||| ||||| ||||| |||| Sbjct 473130 AAGACTCTGACAGGCAAGACCATCACCTTGGAGGTGGAGAGTTCCGACACCATCGACAAT 473189 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || |||||||| || ||||| ||| || ||| || || | |||||| Sbjct 473190 GTGAAGACCAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAGCAGCGATTGATCTTC 473249 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || ||| | |||||||| |||||||||||||| || ||| |||| || |||||| Sbjct 473250 GCTGGGAAACAGCTCGAAGATGGCAGGACTTTGGCCGACTATAACATCCAAAAGGAGTCT 473309 Query 206365 ACTCTTCACCTTGTTTTG 206382 |||||||| ||||| ||| Sbjct 473310 ACTCTTCATCTTGTGTTG 473327 Score = 131 bits (144), Expect = 4e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || ||||| || || || || ||||| ||||| ||||||||||| |||| Sbjct 472902 AAGACTCTGACAGGCAAGACTATAACCTTGGAGGTGGAGAGTTCTGACACTATCGACAAT 472961 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || || ||||| || || || ||| || || || || | |||||| Sbjct 472962 GTGAAGACTAAAATCCAAGATAAGGAGGGTATTCCTCCAGATCAGCAGCGATTGATCTTC 473021 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | |||||||||||||| ||||||| |||||| |||| || |||||| Sbjct 473022 GCCGGCAAGCAGCTCGAAGATGGAAGGACCCTGGCCGACTACAACATCCAAAAGGAGTCT 473081 Query 206365 ACTCTTCACCTTGTTTTGAG 206384 || |||||||| || |||| Sbjct 473082 ACCCTTCACCTCGTCCTGAG 473101 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || || || || | || ||||| || |||||| Sbjct 472206 CAGATCTTCGTCAAGACTTTGACGGGTAAGACAATTACCCTCGAGGTGGAGAGCTCTGAC 472265 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| || |||||||| || || || ||| || ||| || Sbjct 472266 ACCATCGACAATGTAAAGACTAAAATTCAAGATAAGGAGGGTATTCCCCCAGACCAGCAG 472325 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| ||||| |||||| | || ||||||||||| |||| ||||||||| || Sbjct 472326 CGTCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGAAGGACGCTGGCTGATTACAACATC 472385 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || || ||||| || |||||||| ||| ||||||| Sbjct 472386 CAAAAGGAGTCCACCCTTCACCTGGTTCTGAGACT 472420 Score = 118 bits (130), Expect = 3e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||| | || || ||||| |||||||| |||| || || Sbjct 473595 ACCGGGAAGACTATCACTCTCGAGGTCGAAAGCTCTGACACCATCGACAATGTCAAAACC 473654 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || ||||||||| || || || ||| | ||||| || |||||| Sbjct 473655 AAGATCCAGGACAAGGAAGGAATTCCTCCCGATCAGCAGAGATTGATCTTTGCAGGAAAG 473714 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| ||||||||||| | || |||| |||||||| |||| ||||| || ||||| || Sbjct 473715 CAGCTGGAAGATGGACGAACCCTGGCGGATTACAATATCCAAAAAGAATCAACTCTGCAT 473774 Query 206374 CTTGTTTTGAGACTTCGA 206391 |||||| |||| || ||| Sbjct 473775 CTTGTTCTGAGGCTGCGA 473792 Score = 98.7 bits (108), Expect = 2e-15 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 204760 CAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATC 204819 ||| ||||| |||||||||||||| || |||| |||||||| ||||||||||| ||||| Sbjct 473327 CAACACAAGATGAAGAGTAGACTCCTTTTGGATGTTATAGTCGGCCAAAGTCCTGCCATC 473268 Query 204820 TTCCAGCTGCTTTCCGGCGAAGAT 204843 ||| ||||| || || |||||||| Sbjct 473267 TTCGAGCTGTTTCCCAGCGAAGAT 473244 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 ||||||| ||| |||||||| || ||||| || |||| || || ||||||| |||||| Sbjct 472420 AGTCTCAGAACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGCCAGCGTCCTT 472361 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||| || |||||||| ||||| ||||| || || || || Sbjct 472360 CCATCCTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTG 472320 Score = 93.3 bits (102), Expect = 1e-13 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 204758 CTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCA 204817 |||| || |||||||| |||||||| || |||| || ||||| |||| ||||||||| Sbjct 473101 CTCAGGACGAGGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTCCTTCCA 473042 Query 204818 TCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||||| |||||||| ||||||||||| | || || ||| Sbjct 473041 TCTTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGA 473003 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || | || |||||||| ||||||||||| || ||||| || || Sbjct 473346 CAGATCTTTGTCAAGACATTGACTGGAAAAACCATCACTTTGGAGGTTGAAAGCTCAGAT 473405 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||| || || || || || ||| || ||| || Sbjct 473406 ACCATCGACAACGTGAAGACAAAGATCCAGGATAAGGAGGGTATTCCTCCCGACCAGCAG 473465 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||| ||||| |||||| | || ||||| | || ||||| || || || | Sbjct 473466 CGATTGATCTTTGCCGGTAAGCAGCTCGAGGATGGTCGTACCTTGGCAGACTATAATATT 473525 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 || || || ||||| | || ||||| Sbjct 473526 CAAAAGGAATCTACCTTGCATCTTGT 473551 Score = 87.8 bits (96), Expect = 4e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 ||| || |||| |||||| || ||||| || ||||| |||| ||| || || |||| || Sbjct 473792 TCGCAGCCTCAGAACAAGATGCAGAGTTGATTCTTTTTGGATATTGTAATCCGCCAGGGT 473733 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGAT 204843 | ||||||||||||||||||||| || ||||| Sbjct 473732 TCGTCCATCTTCCAGCTGCTTTCCTGCAAAGAT 473700 >seq2625 Length=346021 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || ||||| |||||||| || ||||| ||||| || ||||| || ||| Sbjct 280882 CAGATATTTGTGAAGACGCTTACAGGAAAGACCATCACCTTGGAGGTCGAAAGCTCCGAC 280941 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || || ||||| ||||| || || || ||| || ||| || Sbjct 280942 ACCATCGACAACGTCAAAACCAAGATCCAAGATAAGGAGGGTATTCCTCCAGACCAACAG 281001 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| || || ||||||||||| || || | || |||||||||| || | Sbjct 281002 AGATTGATCTTTGCAGGTAAGCAGTTGGAGGACGGCCGAACGCTGGCCGATTATAATATA 281061 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||||| ||||||||||| || || || |||||| Sbjct 281062 CAGAAGGAGTCTACTCTCCATCTCGTCTTGAGA 281094 Score = 122 bits (134), Expect = 2e-22 Identities = 149/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGA-ATC 206243 || |||||||| || ||||| ||||| ||||| || ||||| ||||||||| | || ||| Sbjct 280666 AAGACGCTCACGGGGAAAACCATCACGTTGGAGGTCGAAAGCTCTGACACAATTGACATC 280725 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 ||| | ||| ||||| || || || ||||| || || || || | ||||| Sbjct 280726 GTGAAAACCAAA-ATTCAGGACAAGGAGGGAATCCCTCCAGATCAGCAGAGGTTGATCTT 280784 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||||||||||||||| | || | || || |||||| |||| |||||||| Sbjct 280785 TGCAGGCAAGCAGTTGGAAGATGGTCGTACCCTCGCGGACTACAACATCCAAAAAGAGTC 280844 Query 206364 TACTCTTCACCTTGTTTTGAG 206384 ||||| || ||||| |||| Sbjct 280845 GACTCTGCATCTTGTGCTGAG 280865 Score = 105 bits (116), Expect = 2e-17 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| | || || || ||||| |||||||| || || ||||| ||| Sbjct 281338 CAGATTTTCGTCAAAACCTTGACTGGCAAGACGATTACTTTGGAGGTTGAGAGTTCCGAC 281397 Query 206233 ACAGTCGA--ATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290 || | || || | ||| ||||| ||||||| || || |||||| || ||| | Sbjct 281398 ACCATTGACAATGTGAAAACCAAAA--TTCAAGACAAGGAGGGAATTCCTCCAGACCAGC 281455 Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350 | ||| | || || ||||| || ||| | |||||||| |||| | |||||||||||| Sbjct 281456 AGAGATTGATTTTTGCCGGGAAACAGCTTGAAGATGGTCGGACACTCGCCGATTACAACA 281515 Query 206351 TCCAGAAAGAGTCTAC 206366 |||| || || ||||| Sbjct 281516 TCCAAAAGGAATCTAC 281531 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || ||||| || || | || || || ||||||||||| |||| Sbjct 280438 AAAACTCTGACGGGGAAAACCATTACCCTCGAGGTCGAGAGTTCTGACACCATCGACAAT 280497 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || ||||| || || || || | |||||| Sbjct 280498 GTCAAGACTAAGATCCAGGATAAGGAGGGAATCCCCCCAGATCAGCAGAGGTTGATCTTC 280557 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| || || | || || || |||| ||||||| |||||| | ||||||||||| Sbjct 280558 GCCGGCAAACAACTAGAGGACGGCCGGACGCTGGCCGACTACAACATTCAGAAAGAGTCC 280617 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 || ||||| |||||| ||||| Sbjct 280618 ACGCTTCATCTTGTTCTGAGA 280638 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || ||||| || || ||||| |||| || ||||| || || Sbjct 281110 CAGATTTTCGTCAAGACTCTTACAGGGAAGACTATCACCCTGGAGGTTGAAAGCTCCGAT 281169 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| ||||| || ||||||||| || || || Sbjct 281170 ACTATCGACAACGTGAAGACTAAGATCCAAGATAAGGAAGGAATTCCACCAGATCAGCAG 281229 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | || || ||||| ||||||||||| || || | || |||| || |||||| || Sbjct 281230 CGGTTGATTTTTGCCGGTAAGCAGTTGGAGGACGGCCGAACGCTGGCTGACTACAACATC 281289 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || ||||| ||||| || || || |||||| Sbjct 281290 CAAAAGGAGTCCACTCTCCATCTGGTGTTGAGA 281322 Score = 100 bits (110), Expect = 7e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || || || || ||| | || ||||| || |||||||| | || Sbjct 281578 AAAACCCTCACCGGCAAGACCATAACTCTTGAGGTGGAGAGCTCTGACACGATTGATAAC 281637 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || || |||||||| || || ||||| || || || || || | || || Sbjct 281638 GTGAAAACGAAGATTCAGGACAAGGAAGGCATCCCTCCAGATCAGCAGAGGTTGATTTTT 281697 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||||||||| | || ||||| ||||| |||||||| |||||| |||| || || ||| Sbjct 281698 GCCGGAAAGCAACTTGAGGATGGGAGGACGTTGGCCGACTACAACATCCAAAAGGAATCT 281757 Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387 || || || | |||||||| || Sbjct 281758 ACCCTCCATTTGGTTTTGAGGCT 281780 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || ||||| || |||||||||||||| || || ||||| || || |||| Sbjct 279982 AAGACTCTGACAGGGAAGACGATCACTTTGGAGGTCGAGAGTTCCGATACCATCGACAAC 280041 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || || || || || || || || || ||| || | | || ||| Sbjct 280042 GTCAAGAGCAAAATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGGTTGATTTTC 280101 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| ||||| | || ||||| | | ||||||||| ||||| ||||||| ||| Sbjct 280102 GCCGGCAAGCAACTCGAGGATGGTCGCAGTTTGGCCGACTACAATATCCAGAAGGAGAGC 280161 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| || | ||| ||||||| || Sbjct 280162 ACTCTGCATTTGGTTCTGAGACTGCG 280187 >seq487 Length=466406 Score = 127 bits (140), Expect = 5e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || || ||| |||| |||||||| || ||||| |||| Sbjct 177051 AAGACCCTCACGGGTAAGACAATTACTCTGGAGGTGGAAAGCTCCGACACCATCGATAAT 177110 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||||| |||||||||||| || ||| || ||||| |||||| Sbjct 177111 GTCAAGGCTAAGATTCAAGACAAAGAAGGAATTCCCCCAGACCAGCAGAGACTGATCTTC 177170 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | |||||||| | ||| | || || || ||| |||| || ||||| Sbjct 177171 GCCGGCAAGCAGCTCGAAGATGGCCGAACTCTCGCGGACTATAACATCCAAAAGGAGTCC 177230 Query 206365 ACTCTTCA 206372 ||||| || Sbjct 177231 ACTCTCCA 177238 Score = 122 bits (134), Expect = 2e-22 Identities = 142/189 (75%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGA-ATC 206243 |||||||| || || |||||||||||| |||||||||| || || ||||| |||| | | Sbjct 182797 AAAACGCTGACCGGCAAAACGATCACTCTGGAAGTGGAGAGCTCCGACACTATCGACAAC 182856 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 |||||| |||||||| || || || || ||| || || |||||| | ||||| Sbjct 182857 GTTAAAGC-TAAGATTCAGGACAAGGAGGGCATTCCTCCTGATCAGCAAAGATTGATCTT 182915 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || |||||| | |||||||| | || | || || |||||| |||| || ||||| Sbjct 182916 CGCTGGTAAGCAGCTCGAAGATGGTCGTACCCTCGCAGACTACAACATCCAAAAGGAGTC 182975 Query 206364 TACTCTTCA 206372 ||||| || Sbjct 182976 CACTCTCCA 182984 Score = 122 bits (134), Expect = 2e-22 Identities = 154/209 (74%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || ||||| |||||| |||||||||| || |||||||| |||| Sbjct 183347 CAAGACTCTGACGGGGAAAACCATCACTCTGGAAGTGGAGAGCTCTGACACCATCGACAA 183406 Query 206244 AGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302 || ||||| ||| || || || || || |||||| || ||| || || | |||| Sbjct 183407 TGTGAAAGCCAAA-ATCCAGGACAAGGAGGGAATTCCTCCCGACCAGCAGCGATTGATCT 183465 Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362 |||| || |||||| |||||||||| | || |||||||||||||| | || ||||||| Sbjct 183466 TCGCTGGCAAGCAGCTGGAAGATGGTCGTACACTGGCCGATTACAACATTCAAAAAGAGT 183525 Query 206363 CTACTCTTCACCTTGTTTTGAGACTTCGA 206391 | || | || || || ||| | || ||| Sbjct 183526 CGACGTTGCATCTGGTGTTGCGTCTGCGA 183554 Score = 118 bits (130), Expect = 3e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||||||||| ||||||||| | || |||||||| || ||||| || || Sbjct 182569 AAGACCCTCACAGGAAAGACGATCACTCTCGAGGTGGAAAGCTCCGACACCGTGGACAAC 182628 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||| || || || || ||||| ||| || ||| || || || |||||| Sbjct 182629 GTGAAGGCAAAAATCCAGGACAAGGAAGGGATTCCACCAGACCAGCAGAGGCTGATCTTC 182688 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| | |||||||| | ||| | || || |||||| |||| || ||||| Sbjct 182689 GCTGGTAAGCAGCTCGAAGATGGCCGCACTCTCGCAGACTACAACATCCAAAAGGAGTCC 182748 Query 206365 ACTCTTCA 206372 ||||| || Sbjct 182749 ACTCTCCA 182756 Score = 109 bits (120), Expect = 1e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || |||||||||||||| || ||||| || ||||| |||| Sbjct 176367 AAGACCCTCACGGGCAAGACGATCACTTTGGAGGTTGAAAGCTCCGACACCATCGACAAC 176426 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || |||||| || ||| || || || |||||| Sbjct 176427 GTGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCAGCAGAGGCTGATCTTC 176486 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| |||||||| || | ||| | || || |||||| |||| || || || Sbjct 176487 GCTGGCAAGCAATTGGAAGACGGCCGAACTCTTGCGGACTACAACATCCAAAAGGAATCA 176546 Query 206365 ACTCTTCA 206372 ||||| || Sbjct 176547 ACTCTCCA 176554 Score = 107 bits (118), Expect = 5e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || || || |||||| |||| || ||||| || || || |||| Sbjct 177506 CAAGACTCTGACCGGCAAGACCATCACTCTGGAGGTAGAAAGCTCGGATACGATCGATAA 177565 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||||| || || ||||||||| || ||| || || || ||||| Sbjct 177566 TGTGAAGGCCAAGATTCAGGACAAGGAAGGAATTCCCCCAGACCAGCAGAGGCTGATCTT 177625 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || |||||| | |||||||| | || | || || |||||| | ||||| ||||| Sbjct 177626 CGCTGGCAAGCAGCTCGAAGATGGCCGCACCCTCGCAGACTACAACATTCAGAAGGAGTC 177685 Query 206364 TACTCTTCA 206372 |||||| || Sbjct 177686 TACTCTCCA 177694 Score = 104 bits (114), Expect = 6e-17 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || ||||| ||||| | || ||||| || || ||| Sbjct 176811 CAGATCTTCGTCAAGACTCTGACTGGCAAAACCATCACCCTCGAGGTGGAGAGCTCCGAC 176870 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || |||| || ||||| || ||| || || || || ||||| || ||| || Sbjct 176871 ACTATCGACAACGTCAAAGCCAA-GATCCAGGACAAGGAGGGAATCCCCCCTGACCAGCA 176929 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || | ||||||||||| ||||||||||||||||| | || | || || |||||| | Sbjct 176930 GAGGTTGATCTTCGCCGGTAAGCAGTTGGAAGATGGCCGCACCCTCGCAGACTACAACAT 176989 Query 206352 CCAGAAAGAGTCTACTCTTCA 206372 ||| || ||||||||||| || Sbjct 176990 CCAAAAGGAGTCTACTCTCCA 177010 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 206251 CAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGA 206310 || |||||||| || || ||||||||| || ||| || || || |||||||| || Sbjct 183186 CANAAGATTCAGGACAAGGAAGGAATTCCACCAGACCAGCAGAGGCTGATCTTCGCTGGC 183245 Query 206311 AAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTT 206370 |||||| | |||||||| | || | || || |||||| | ||||| ||||||||||| Sbjct 183246 AAGCAGCTCGAAGATGGCCGCACGCTCGCAGACTACAACATTCAGAAGGAGTCTACTCTC 183305 Query 206371 CA 206372 || Sbjct 183306 CA 183307 >seq4073 Length=488838 Score = 113 bits (124), Expect = 1e-19 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 |||||||| || ||||| || || || || ||||| ||||| ||||| || || || Sbjct 173908 CAGATATTCGTGAAGACGCTGACGGGGAAGACCATCACGTTGGAGGTGGAGAGCTCCGAT 173849 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || || ||||||||||| || || || || || ||| || Sbjct 173848 ACGATCGATAATGTGAAAGTTAAGATTCAAGACAAGGAGGGGATCCCTCCTGACCAGCAG 173789 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||| ||||| |||||| | || ||||| | ||| |||| ||||||||| || Sbjct 173788 AGGTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACTCTGGCGGATTACAACATC 173729 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 ||||| ||||| ||||| || | || |||||||| Sbjct 173728 CAGAAGGAGTCGACTCTCCATTTGGTGTTGAGACT 173694 Score = 111 bits (122), Expect = 4e-19 Identities = 143/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || || || |||||| |||| || || || || ||||| |||| Sbjct 173212 AAAACATTGACCGGCAAGACCATCACTCTGGAGGTCGAGAGCTCGGACACCATCGACAAC 173153 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| || |||||| || || ||||| ||| || ||| || || | ||||| Sbjct 173152 GTCAAAGCGAA-GATTCAGGACAAGGAAGGTATTCCTCCCGACCAGCAGAGGTTGATCTT 173094 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | |||||||| | ||| |||| ||||| ||| | ||||||||||| Sbjct 173093 CGCCGGTAAGCAGCTCGAAGATGGGCGAACTCTGGCAGATTATAACATTCAGAAAGAGTC 173034 Query 206364 TACTCTTCACCTTGT 206378 || || || ||||| Sbjct 173033 CACCCTGCATCTTGT 173019 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || | || || || || || ||||| || |||||||| || ||| Sbjct 173452 CAGATTTTTGTCAAGACCTTGACTGGCAAGACCATTACTTTAGAGGTGGAAAGCTCCGAC 173393 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| || || || || ||||||||||| || || || Sbjct 173392 ACGATCGACAACGTCAAGGCGAAAATCCAGGACAAAGAAGGAATCCCTCCTGATCAGCAG 173333 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||||||||| |||||| | |||||||| | ||| |||| || || || | Sbjct 173332 AGGTTGATCTTCGCCGGTAAGCAGCTCGAAGATGGGCGAACTCTGGCAGACTATAATATA 173273 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 |||||||||||||| || || ||||| Sbjct 173272 CAGAAAGAGTCTACCCTGCATCTTGT 173247 Score = 102 bits (112), Expect = 2e-16 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || |||||| |||| || || || || ||||| |||| Sbjct 172984 AAAACACTGACCGGCAAGACCATCACTCTGGAGGTCGAGAGCTCGGACACCATCGACAAC 172925 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| || |||||| || || ||||| ||| || || || || | ||||| Sbjct 172924 GTCAAAGCGAA-GATTCAGGACAAGGAAGGTATTCCTCCCGATCAGCAGAGGTTGATCTT 172866 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| ||||| | |||||||| | ||| | || ||||| ||| | ||||||||||| Sbjct 172865 CGCCGGTAAGCAACTCGAAGATGGGCGAACTCTTGCAGATTATAACATTCAGAAAGAGTC 172806 Query 206364 TACTCTTCACCTTGT 206378 || || || ||||| Sbjct 172805 CACCCTGCATCTTGT 172791 Score = 91.5 bits (100), Expect = 3e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||| || || |||||||||||||| | ||||||||| |||| ||| | |||||||| Sbjct 173247 ACAAGATGCAGGGTAGACTCTTTCTGTATATTATAGTCTGCCAGAGTTCGCCCATCTTCG 173306 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||| ||||||||||| | || || ||| Sbjct 173307 AGCTGCTTACCGGCGAAGATCAACCTCTGCTGA 173339 >seq3072 Length=975934 Score = 91.5 bits (100), Expect = 3e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||| | ||||| || || || || ||| | || ||||| || |||||||| | || Sbjct 271370 AAAGCCCTCACGGGCAAGACCATAACTCTTGAGGTGGAGAGCTCTGACACGATTGACAAC 271429 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || || |||||||| || || ||||| || || || || || | || || Sbjct 271430 GTGAAAACGAAGATTCAGGACAAGGAAGGCATCCCTCCAGATCAGCAGAGGTTGATTTTT 271489 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||||||||| | || ||||| ||||| |||||||| |||||| |||| || || ||| Sbjct 271490 GCCGGAAAGCAACTTGAGGATGGGAGGACGTTGGCCGACTACAACATCCAAAACGAATCT 271549 Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387 || || || | || ||||| || Sbjct 271550 ACCCTCCATTTGGTGTTGAGGCT 271572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181758157219177