Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2625 158 1e-33 seq487 154 1e-32 seq4073 138 1e-27 seq4017 136 4e-27 seq3627 120 3e-22 seq3072 113 4e-20 seq824 107 2e-18 >seq2625 Length=346021 Score = 158 bits (174), Expect = 1e-33 Identities = 177/233 (76%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||| || | | |||||| |||||||| | ||| |||||||||||||||||| |||| Sbjct 282019 TTCCTCCCCTCAGCCTCAAGACCAAATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGG 281960 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 ||||||| || |||| || || ||||| || ||||| ||||||| |||||| || | || Sbjct 281959 CCAAGGTACGACCGTCCTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAG 281900 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGAT 35683 | | || ||||||||| ||||| |||| |||| | | |||||| |||| Sbjct 281899 GGATGCCTTCCTTGTCCTGAATCTTCGTTTTCA-CGTTGTCAATCGTGTCAGAGCTC--- 281844 Query 35684 TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||||| | ||||| || ||||| ||||| || |||||||| |||||||| Sbjct 281843 TCCACCTCAAGAGTGATGGTCTTACCGGTCAATGTCTTCACAAAAATCTGCAT 281791 Score = 125 bits (138), Expect = 6e-24 Identities = 170/232 (73%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | |||| |||||||| | || |||||||| || || ||||| |||||| Sbjct 280193 CCTCCACGCAGTCTCAGAACCAAATGCAGAGTGCTCTCCTTCTGGATATTGTAGTCGGCC 280134 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || | || | || || || ||||| || || || ||||||||||||||||| | || Sbjct 280133 AAACTGCGACCATCCTCGAGTTGCTTGCCGGCGAAAATCAACCGCTGCTGGTCAGGGGGG 280074 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGA-GTTG-CCACCGTGTCG---CTCGATT 35684 | || |||||||||| || ||||||| || |||| | | || ||| ||| | Sbjct 280073 ATGCCCTCCTTGTCCTGGA--TTTTGCTCTTGACGTTGTCGATGGTATCGGAACTC---T 280019 Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | ||||||| |||||||| || || |||| ||| ||||| || |||||||| Sbjct 280018 CGACCTCCAAAGTGATCGTCTTCCCTGTCAGAGTCTTCACGAAGATCTGCAT 279967 Score = 122 bits (134), Expect = 8e-23 Identities = 161/220 (73%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 35519 AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGC 35578 || ||||| || | ||| | ||| |||||| || || || |||||||||| ||||| Sbjct 281096 AATCTCAAGACGAGATGGAGAGTAGACTCCTTCTGTATATTATAATCGGCCAGCGTTCGG 281037 Query 35579 TCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCC 35638 |||| |||| ||||||||| ||||| ||||| | ||| ||||| | ||||| | |||| Sbjct 281036 CCGTCCTCCAACTGCTTACCTGCAAAGATCAATCTCTGTTGGTCTGGAGGAATACCCTCC 280977 Query 35639 TTGTCCATGATCTTTTGCTTCAGA-GTTGCC-ACCGTGTCGCTCGATTCCACCTCCACCG 35696 || || |||||| | || || |||| | | |||||| ||| ||||||| | Sbjct 280976 TTATCTTGGATCTT--GGTTTTGACGTTGTCGATGGTGTCGGAGCTTTCGACCTCCAAGG 280919 Query 35697 TGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || || || | || ||||||||||||||||| Sbjct 280918 TGATGGTCTTTCCTGTAAGCGTCTTCACAAATATCTGCAT 280879 Score = 122 bits (134), Expect = 8e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 35519 AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGC 35578 || |||||||||| ||| | || ||||||||| |||||||| || |||| ||||| Sbjct 281324 AATCTCAACACCAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGCCAGCGTTCGG 281265 Query 35579 TCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCC 35638 |||| |||| ||||||||| ||||| |||||||||||||| || | |||| | ||| Sbjct 281264 CCGTCCTCCAACTGCTTACCGGCAAAAATCAACCGCTGCTGATCTGGTGGAATTCCTTCC 281205 Query 35639 TTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGT 35697 || || |||||| ||||| |||| | | || ||| ||| ||||||| || Sbjct 281204 TTATCTTGGATCTTAGTCTTCA-CGTTGTCGATAGTATCGGAGCTTTCAACCTCCAGGGT 281146 Query 35698 GATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| || || || || | ||| || || || |||||||| Sbjct 281145 GATAGTCTTCCCTGTAAGAGTCTTGACGAAAATCTGCAT 281107 Score = 120 bits (132), Expect = 3e-22 Identities = 161/220 (73%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 35521 CCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTC 35580 ||||| |||||||| || ||| |||||||| |||||||||||||| | || || | Sbjct 281550 CCTCAGGACCAAATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGGCGAGTGTCCGACC 281491 Query 35581 GTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTT 35640 || || ||||| || || ||||| ||||| | ||||||||| | ||||| | |||||| Sbjct 281490 ATCTTCAAGCTGTTTCCCGGCAAAAATCAATCTCTGCTGGTCTGGAGGAATTCCCTCCTT 281431 Query 35641 GTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCG---CTCGATTCCACCTCCACCG 35696 || | ||| ||| | |||| | | | | |||||| ||| || ||||||| | Sbjct 281430 GT-CTTGAATTTTGGTTTTCACATTGTCAATGGTGTCGGAACTC---TCAACCTCCAAAG 281375 Query 35697 TGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | ||||| || || ||||| ||||| || || |||||||| Sbjct 281374 TAATCGTCTTGCCAGTCAAGGTTTTGACGAAAATCTGCAT 281335 Score = 113 bits (124), Expect = 4e-20 Identities = 166/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || || || | ||||||||| | ||| || || ||| ||||| |||||||| |||||| Sbjct 280421 CCTCCTCGCAGCCTCAACACAAGATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCGGCC 280362 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| || || || ||||| || || ||||||||||||||||| | ||| Sbjct 280361 AGCGTGCGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCGCTGCTGGTCAGGGGGA 280302 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTC---GCTCGATTC 35685 | || |||||| | | ||| ||| | ||||| | | | | ||| || ||| ||| Sbjct 280301 ATGCCCTCCTTAT-CTTGAATTTTCGTCTTCACATTGTCGATCGTATCAGAGCT---TTC 280246 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | ||||| || || ||||| | || || || || |||||||| Sbjct 280245 GACCTCAAGAGTGATGGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 280195 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/221 (69%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 35519 AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGC 35578 || |||| || | ||| | ||| ||| || ||||||||||| ||||||| || || Sbjct 280640 AATCTCAGAACAAGATGAAGCGTGGACTCTTTCTGAATGTTGTAGTCGGCCAGCGTCCGG 280581 Query 35579 TCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCC 35638 |||| || || || || || || || ||||||| |||||| || | || | | |||| Sbjct 280580 CCGTCCTCTAGTTGTTTGCCGGCGAAGATCAACCTCTGCTGATCTGGGGGGATTCCCTCC 280521 Query 35639 TTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACC 35695 || ||| |||||| ||| | | | | | ||||| ||| || ||||| | Sbjct 280520 TTATCCTGGATCTTAGTCTTGACATTGTCGATGGTGTCAGAACTC---TCGACCTCGAGG 280464 Query 35696 GTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || ||||| ||||||| |||||| || || || ||||| Sbjct 280463 GTAATGGTTTTCCCCGTCAGAGTTTTAACGAAAATTTGCAT 280423 >seq487 Length=466406 Score = 154 bits (170), Expect = 1e-32 Identities = 182/241 (76%), Gaps = 9/241 (4%) Strand=Plus/Minus Query 35503 TTTA-TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGT 35561 |||| ||||| || || | | |||||||| ||| ||||| ||| ||||||||||||| Sbjct 183567 TTTAGTTTCCTCCTCGCAGACGCAACACCAGATGCAACGTCGACTCTTTTTGAATGTTGT 183508 Query 35562 AATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGT 35621 ||||||||| || || | || ||||||||||| || || || ||||| |||||||||| Sbjct 183507 AATCGGCCAGTGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGT 183448 Query 35622 CCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTC---G 35677 | | ||||| | |||||||||| ||| ||| || |||| | | | | ||||| | Sbjct 183447 CGGGAGGAATTCCCTCCTTGTCCTGGAT-TTTGGCTTTCACATTGTCGATGGTGTCAGAG 183389 Query 35678 CTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 ||| ||||| |||| ||||| ||||| ||||||| ||| || || || || |||||| Sbjct 183388 CTC---TCCACTTCCAGAGTGATGGTTTTCCCCGTCAGAGTCTTGACGAAGATTTGCATT 183332 Query 35738 C 35738 | Sbjct 183331 C 183331 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||||||| | || ||||||||| |||||||| || || | ||| || |||| || Sbjct 182535 CACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCGTCTTC 182476 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || ||||||| ||||||||| | |||| | |||||||||| Sbjct 182475 GAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATTCCCTCCTTGTCCTG 182416 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 ||||| ||||| | | | | |||||| ||||||||||| || || || || Sbjct 182415 AATCTTGGCCTTCACATTATCGATGGTGTCGGAGCTTTCCACCTCCAGAGTAATTGTCTT 182356 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| | || ||||| || |||||||| Sbjct 182355 ACCCGTGAGGGTCTTCACGAAGATCTGCAT 182326 Score = 127 bits (140), Expect = 2e-24 Identities = 160/216 (74%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||||||| | || ||||||||| |||||||| || || | ||| || | || || Sbjct 182991 CACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCGAGGGTACGACCATCTTC 182932 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||||| || || ||||| | ||||| || | ||||| || |||||||||| | Sbjct 182931 GAGCTGCTTACCAGCGAAGATCAATCTTTGCTGATCAGGAGGAATGCCCTCCTTGTCC-T 182873 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCG 35702 || || |||| | |||| | | ||||| |||| ||||| |||| ||||||| Sbjct 182872 GAATCTTAGCTTTAACGTTGTCGATAGTGTCGGAGCTC---TCCACTTCCAGAGTGATCG 182816 Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 |||| || |||| ||||| || || |||||||||| Sbjct 182815 TTTTGCCGGTCAGCGTTTTTACGAAGATCTGCATTC 182780 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 35519 AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGC 35578 |||| | |||||| || | || |||||| || ||||||||||| || | ||| || Sbjct 182315 AACCGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGTGCGG 182256 Query 35579 TCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCC 35638 |||| || |||||||| || ||||| ||||||| ||||||||| | || | | |||| Sbjct 182255 CCGTCTTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATTCCCTCC 182196 Query 35639 TTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTG 35698 || ||| ||||| ||||| | | | | || ||||| || ||||| | |||| Sbjct 182195 TTATCCTGAATCTTGGCCTTCACATTGTCGATGGTATCGCTGCTCTCGACCTCGAGCGTG 182136 Query 35699 ATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || ||||||| || |||||||| |||||||| Sbjct 182135 ATGGTCTTTCCCGTCAGCGTCTTCACAAAGATCTGCAT 182098 Score = 122 bits (134), Expect = 8e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 35519 AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGC 35578 |||| | ||||||||| | || ||||||||| |||||||| || || | ||||| Sbjct 176797 AACCGAAGCACCAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCAAGAGTTCGG 176738 Query 35579 TCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCC 35638 |||| || ||||||||||| ||||| |||| || ||||||||| | ||||| | |||| Sbjct 176737 CCGTCCTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCTGGAGGAATTCCCTCC 176678 Query 35639 TTGTCCATGATCTTTTGCTTCAGAGTT-GCCACCGTGTCGCTCGATTCCACCTCCACCGT 35697 |||||| ||| ||| |||| ||| | | || ||| ||| || || | || Sbjct 176677 TTGTCC-TGAATTTTGGCTTTGACGTTATCAATGGTATCGGAGCTTTCTACTTCTAAAGT 176619 Query 35698 GATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| || ||||| || | ||||||||||| |||||||| Sbjct 176618 GATAGTCTTACCGGTGAGTGTTTTCACAAAAATCTGCAT 176580 Score = 116 bits (128), Expect = 3e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||||||| | || ||||||||| |||||||| || || | || || | || || Sbjct 182763 CACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCGAGAGTGCGGCCATCTTC 182704 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||||| || || |||| || ||||||||| | |||| | ||||||||| Sbjct 182703 GAGCTGCTTACCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGAATCCCTTCCTTGTCCTG 182644 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||| ||| ||||| |||| |||| |||||| ||||||||| | |||||||| | Sbjct 182643 GATTTTTGCCTTCA-CGTTGTCCACGGTGTCGGAGCTTTCCACCTCGAGAGTGATCGTCT 182585 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || || | || ||||| || || ||||| Sbjct 182584 TTCCTGTGAGGGTCTTCACGAAGATTTGCAT 182554 Score = 105 bits (116), Expect = 6e-18 Identities = 152/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||||||| | ||| |||||| ||||||||||| || || | ||| || | || || Sbjct 177701 CACCAAATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCTGCGAGGGTGCGGCCATCTTC 177642 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || |||| || ||||||||| | |||| | ||||||||| Sbjct 177641 GAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTG 177582 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGT 35703 ||||| ||||| | | | | ||| || ||| ||| ||||||| ||||| || Sbjct 177581 AATCTTGGCCTTCACATTATCGATCGTATCCGAGCT---TTCTACCTCCAGAGTGATGGT 177525 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || |||| ||| || || || || ||||| Sbjct 177524 CTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 177492 Score = 102 bits (112), Expect = 7e-17 Identities = 153/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 || ||||||||| | || |||||| || |||||||| || || | ||||| | || Sbjct 177476 CAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGAGTTCGGCCATC 177417 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 || |||||||| || || || |||| || ||||||||| | |||| | |||||||| Sbjct 177416 TTCGAGCTGCTTTCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTGTC 177357 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGA---TTCCACCTCCACCGTGAT 35700 | ||||| |||| | | | | ||| || ||| ||| ||||| | ||||| Sbjct 177356 CTGAATCTTAGCTTTCACATTATCGATCGTATC---CGAGCTTTCTACCTCAAGAGTGAT 177300 Query 35701 CGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| || || ||||||||||| || || || ||||| Sbjct 177299 CGTCTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 177264 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||||||| | || ||||||||| ||||| || || || | ||||| | || || Sbjct 177245 CACCAAATGGAGAGTGGACTCCTTTTGGATGTTATAGTCCGCGAGAGTTCGGCCATCTTC 177186 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || |||| | ||||||||| | |||| | || ||||| Sbjct 177185 GAGCTGCTTGCCGGCGAAGATCAGTCTCTGCTGGTCTGGGGGAATTCCTTCTTTGTCTTG 177126 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 ||||| ||| | | | | | |||||| ||||||||||| || || || || Sbjct 177125 AATCTTAGCCTTGACATTATCGATGGTGTCGGAGCTTTCCACCTCCAGAGTAATTGTCTT 177066 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| | || ||||| || |||||||| Sbjct 177065 ACCCGTGAGGGTCTTCACGAAGATCTGCAT 177036 Score = 84.2 bits (92), Expect = 2e-11 Identities = 128/181 (71%), Gaps = 6/181 (3%) Strand=Plus/Minus Query 35559 TGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCT 35618 |||| || || | || || | || || |||||||| || || || |||| || ||||| Sbjct 183187 TGTAGTCTGCGAGCGTGCGGCCATCTTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCT 183128 Query 35619 GGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGC 35678 |||| | |||| | ||||||||| ||||| ||||| | | | | |||||| Sbjct 183127 GGTCTGGTGGAATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTATCGATCGTGTC-- 183070 Query 35679 TCGA---TTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 ||| ||||||||||| ||||| || || || |||| |||||| || || || |||| Sbjct 183069 -CGAGCTTTCCACCTCCAGAGTGATGGTCTTTCCGGTCAGAGTTTTGACGAAGATTTGCA 183011 Query 35736 T 35736 | Sbjct 183010 T 183010 >seq4073 Length=488838 Score = 138 bits (152), Expect = 1e-27 Identities = 166/221 (75%), Gaps = 10/221 (5%) Strand=Plus/Plus Query 35521 CCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTC 35580 |||||| |||||||| | ||| |||||||| ||||||||||| |||| || || | Sbjct 173468 CCTCAAAACCAAATGAAGCGTCGATTCCTTTTGGATGTTGTAATCCGCCAGAGTGCGACC 173527 Query 35581 GTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTT 35640 || || |||||||| || ||||| |||| || ||||||||| | ||||| | |||||| Sbjct 173528 ATCCTCGAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATCCCCTCCTT 173587 Query 35641 GTCCATGATCTTTTG--CTTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACC 35695 |||| ||| ||||| ||||| | | | | |||||| |||| || ||||||| | Sbjct 173588 GTCC-TGA-ATTTTGACCTTCACATTGTCGATCGTGTCAGAGCTC---TCGACCTCCAAC 173642 Query 35696 GTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| || || || ||||| || || || || |||||||| Sbjct 173643 GTGATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 173683 Score = 138 bits (152), Expect = 1e-27 Identities = 164/221 (74%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581 |||||||||||||| | || |||||| || ||||||||||| |||| || || | Sbjct 173697 CTCAACACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCCAGAGTGCGACCA 173756 Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 || || |||||||| || ||||| ||||||| ||||||||| | ||| | | ||||||| Sbjct 173757 TCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATCCCCTCCTTG 173816 Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTG 35698 || ||||| |||| | | | | ||| || |||| |||||||||| |||| Sbjct 173817 TCTTGAATCTTAACTTTCACATTATCGATCGTATCGGAGCTC---TCCACCTCCAACGTG 173873 Query 35699 ATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCT 35739 || || || ||||||| || ||||| ||||||||||| || Sbjct 173874 ATGGTCTTCCCCGTCAGCGTCTTCACGAATATCTGCATCCT 173914 Score = 118 bits (130), Expect = 1e-21 Identities = 146/196 (74%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || |||||||| ||||| |||| |||||| | || || ||||||||||| || || Sbjct 173036 CTCTTTCTGAATGTTATAATCTGCCAGAGTTCGCCCATCTTCGAGCTGCTTACCGGCGAA 173095 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| ||||||||| | ||||| | ||||||||| ||| || |||| || Sbjct 173096 GATCAACCTCTGCTGGTCGGGAGGAATACCTTCCTTGTCC-TGAATCTTCGCTTTGACGT 173154 Query 35665 TG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 || | | ||||| |||| || ||||||| ||||| || || || ||||| |||| Sbjct 173155 TGTCGATGGTGTCCGAGCTC---TCGACCTCCAGAGTGATGGTCTTGCCGGTCAATGTTT 173211 Query 35721 TCACAAATATCTGCAT 35736 |||| || || ||||| Sbjct 173212 TCACGAAGATTTGCAT 173227 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||| | ||| | ||| ||| || || || || || || |||| |||||| | || || Sbjct 173246 CACAAGATGCAGGGTAGACTCTTTCTGTATATTATAGTCTGCCAGAGTTCGCCCATCTTC 173305 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||||| || || ||||||| |||||| || | ||| | | || |||||| Sbjct 173306 GAGCTGCTTACCGGCGAAGATCAACCTCTGCTGATCAGGAGGGATTCCTTCTTTGTCCTG 173365 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||| ||| || | |||| | | ||||||| ||||||||| | || || || | Sbjct 173366 GAT-TTTCGCCTTGACGTTGTCGATCGTGTCGGAGCTTTCCACCTCTAAAGTAATGGTCT 173424 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || ||||| || || ||||| |||||||| Sbjct 173425 TGCCAGTCAAGGTCTTGACAAAAATCTGCAT 173455 >seq4017 Length=874442 Score = 136 bits (150), Expect = 4e-27 Identities = 161/214 (75%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||| | ||| || ||| ||||||||||| || || || |||||||| || | || || Sbjct 473552 CACAAGATGCAAGGTAGATTCCTTTTGAATATTATAGTCTGCCAAGGTACGACCATCCTC 473493 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||||| ||||| ||||| ||||||||||| | ||||| | |||||| ||| Sbjct 473492 GAGCTGCTTACCGGCAAAGATCAATCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTG 473433 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCG 35702 ||||||| ||||| |||| | | || || ||| ||| ||||||| ||||| | Sbjct 473432 GATCTTTGTCTTCA-CGTTGTCGATGGTATCTGAGCT---TTCAACCTCCAAAGTGATGG 473377 Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || ||||| || || ||||| |||||||| Sbjct 473376 TTTTTCCAGTCAATGTCTTGACAAAGATCTGCAT 473343 Score = 122 bits (134), Expect = 8e-23 Identities = 168/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | |||| |||||| | ||| | ||| ||||||||| ||||| || |||||| Sbjct 473341 CCACCTCTCAACCGCAACACAAGATGAAGAGTAGACTCCTTTTGGATGTTATAGTCGGCC 473282 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || | | || || ||||| || || || || ||||| ||||||||||| | ||| Sbjct 473281 AAAGTCCTGCCATCTTCGAGCTGTTTCCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGA 473222 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCG---CTCGATTC 35685 | || ||||||| | ||| ||| | ||||| | | | | |||||| ||| || Sbjct 473221 ATGCCTTCCTTGT-CTTGAATTTTGGTCTTCACATTGTCGATGGTGTCGGAACTC---TC 473166 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||||| ||||| || || || |||| ||| ||||| || |||||||| Sbjct 473165 CACCTCCAAGGTGATGGTCTTGCCTGTCAGAGTCTTCACGAAAATCTGCAT 473115 Score = 118 bits (130), Expect = 1e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | ||||||||||| | || | ||| |||||||||||||||||| |||||| Sbjct 472657 CCACCTCTCAACCTCAACACGAGGTGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGCC 472598 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| || ||||| ||||| || || ||||| ||||||||||| | ||| Sbjct 472597 AGAGTTCTACCGTCCTCAAGCTGTTTACCTGCGAAGATCAAACGCTGCTGGTCTGGGGGA 472538 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCG---CTCGATTCC 35686 | | |||||| || |||||| ||||| | | | | |||||| ||| || Sbjct 472537 ATACCCTCCTTATCTTGGATCTTAGTCTTCACATTATCGATGGTGTCGGAACTC---TCA 472481 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | || || || || || ||||| || || || || || ||||| Sbjct 472480 ACCTCGAGAGTAATGGTCTTTCCTGTCAACGTCTTGACGAAGATTTGCAT 472431 Score = 114 bits (126), Expect = 1e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| |||||||| ||||| | ||| | | |||| || |||||||| || || || Sbjct 472850 CTCCTTTTGGATGTTGTAGTCGGCAAGGGTCCTCCCGTCCTCAAGCTGCTTGCCTGCGAA 472791 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | | ||||||||| ||| || ||||| | | Sbjct 472790 GATTAGTCGCTGCTGGTCTGGAGGGATACCCTCCTTGTCTTGGATTTTGGTCTTCACATT 472731 Query 35665 TGCCACCGTGTCG---CTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | |||||| ||| |||||||||| ||||| || || || ||||| || || Sbjct 472730 GTCGATGGTGTCGGAACTC---TCCACCTCCAAGGTGATGGTCTTGCCAGTCAATGTCTT 472674 Query 35722 CACAAATATCTGCAT 35736 ||| || |||||||| Sbjct 472673 CACGAAGATCTGCAT 472659 Score = 109 bits (120), Expect = 5e-19 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | ||||| || | ||| | || || ||||| || |||||||| ||| Sbjct 473797 CCACCTCGCAGCCTCAGAACAAGATGCAGAGTTGATTCTTTTTGGATATTGTAATCCGCC 473738 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||||| | || ||||||||||| || ||||| ||||| | |||||| || | |||| Sbjct 473737 AGGGTTCGTCCATCTTCCAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGATCGGGAGGA 473678 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | | ||||||||| |||||| || | | | | | ||||| ||| ||| Sbjct 473677 ATTCCTTCCTTGTCCTGGATCTTGGTTTTGACATTGTCGATGGTGTCAGAGCT---TTCG 473621 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | ||||| || || || ||||| || ||||| || |||||||| Sbjct 473620 ACCTCGAGAGTGATAGTCTTCCCGGTCAAGGTCTTCACGAAGATCTGCAT 473571 Score = 104 bits (114), Expect = 2e-17 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| ||||||||||| |||| || | | || || |||||||| || ||||| Sbjct 472394 CTCCTTTTGGATGTTGTAATCAGCCAGCGTCCTTCCATCCTCAAGCTGCTTGCCGGCAAA 472335 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAG 35663 |||| ||||||||||| | |||| | |||||| | | ||| ||| | ||| | | Sbjct 472334 GATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTAT-CTTGAATTTTAGTCTTTACAT 472276 Query 35664 TTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 | | | ||||| |||| |||||||| | || || || |||||||||||||| | Sbjct 472275 TGTCGATGGTGTCAGAGCTC---TCCACCTCGAGGGTAATTGTCTTACCCGTCAAAGTCT 472219 Query 35721 TCACAAATATCTGCAT 35736 | || || |||||||| Sbjct 472218 TGACGAAGATCTGCAT 472203 >seq3627 Length=715207 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568 ||| ||||| | || | ||| | || || ||| |||||||||||||||||| ||||| Sbjct 381960 TCCTCCACGAAGTCTGAGCACAAGGTGCAAGGTAGACTCCTTTTGAATGTTGTAGTCGGC 381901 Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 | || || | || ||||||||||| ||||| || ||||| |||||||| |||| ||| Sbjct 381900 AAGAGTGCGACCATCTTCCAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGATCCGGAGG 381841 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 || | |||||||||| |||||| ||||| | | | | || || || ||||| Sbjct 381840 AATCCCCTCCTTGTCCTGGATCTTGGTCTTCACATTGTCGATGGTATCCGAAGACTCCAC 381781 Query 35689 CTCCACCGTGATCGTTTTACCCGT 35712 ||| | ||||| || || ||||| Sbjct 381780 CTCAAGGGTGATAGTCTTGCCCGT 381757 >seq3072 Length=975934 Score = 113 bits (124), Expect = 4e-20 Identities = 166/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | | ||||||||||||||| | ||| || ||||| |||||||| |||||| Sbjct 271581 CCACCTCTCAGCCTCAACACCAAATGGAGGGTAGATTCGTTTTGGATGTTGTAGTCGGCC 271522 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || | | | || || || ||||| || ||||| ||||||| |||||| || | ||| Sbjct 271521 AACGTCCTCCCATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAGGG 271462 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685 | || ||||||||| ||||| |||| |||| | | |||||| |||| || Sbjct 271461 ATGCCTTCCTTGTCCTGAATCTTCGTTTTCA-CGTTGTCAATCGTGTCAGAGCTC---TC 271406 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| | || || || || ||||| | | ||| || || || ||||| Sbjct 271405 CACCTCAAGAGTTATGGTCTTGCCCGTGAGGGCTTTAACGAAGATTTGCAT 271355 >seq824 Length=416372 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568 ||| ||||| | || | ||||| || | ||| |||||| || |||||||| ||||| Sbjct 212171 TCCTCCACGAAGTCTGAGCACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGGC 212112 Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 | ||| || | || || |||||||| || || || ||||| ||||||||||| | || Sbjct 212111 AAGGGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGG 212052 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 || | |||||||||| |||||| ||||| | | | | ||||| || ||||| Sbjct 212051 AATCCCCTCCTTGTCCTGGATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCAC 211992 Query 35689 CTCCACCGTGATCGTTTTACCCGT 35712 ||| | ||||| || || ||||| Sbjct 211991 CTCGAGGGTGATAGTCTTGCCCGT 211968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450770288335960