Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq487 122 7e-23 seq4017 114 1e-20 seq2625 113 4e-20 seq3072 96.9 3e-15 seq4073 87.8 2e-12 >seq487 Length=466406 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077 || ||||| |||| ||||| |||| ||| ||||| || ||||||||||| ||||| ||| Sbjct 183562 TTTCCTCCTCGCAGACGCAACACCAGATGCAACGTCGACTCTTTTTGAATGTTGTAATCG 183503 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 || | || | ||||| ||||| || || ||| | || | ||||| || || || Sbjct 183502 GCCAGTGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCGGGA 183443 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | ||||| || || ||| ||| ||||| | || | ||||| | | || Sbjct 183442 GGAATTCCCTCCTTGTCCTGGATTTTGGCTTTCACATTGTCGATGGTGTCAGAGCTCTCC 183383 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| ||||| || | ||| ||||||||||| || || ||||||||||| Sbjct 183382 ACTTCCAGAGTGATGGTTTTCCCCGTCAGAGTCTTGACGAAGATTTGCAT 183333 Score = 102 bits (112), Expect = 7e-17 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 ||||| | |||||| | |||||||| | || || || ||||| || |||||||| || Sbjct 176806 CCTCCCCTCAACCGAAGCACCAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCA 176747 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 ||| || |||| |||||||| |||||||| | || || | ||| || || || || Sbjct 176746 AGAGTTCGGC-CGTCCTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCTGGAGG 176688 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || || ||| ||| | | | || | || || | | ||| || Sbjct 176687 AATTCCCTCCTTGTCCTGAATTTTGGCTTTGACGTTATCAATGGTATCGGAGCTTTCTAC 176628 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 ||||| ||| |||| || || || || ||||||||||| || |||||| || || Sbjct 176627 TTCTAAAGTGATAGTCTTACCGGTGAGTGTTTTCACAAAAATCTGCATACCTCCT 176573 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| | || || | |||||||| | ||||| || || ||||| |||||||| Sbjct 177720 TGCCTCCCCTCAGACGAAGCACCAAATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCTG 177661 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | |||| | ||||||||||| || || ||| | || || | ||| || || || | Sbjct 177660 CGAGGGTGCGGCCATCTTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGG 177601 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || |||||| |||| | || | || || | | ||| | Sbjct 177600 GAATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTATCGATCGTATCCGAGCTTTCTA 177541 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 | || ||||| || | ||||| |||||||| || || |||||||||||| || Sbjct 177540 CCTCCAGAGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCATACCT 177488 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | ||| || | |||||||| | || || || ||||| || |||||||| | | Sbjct 176578 CCTCCTCTCAAACGAAGAACCAAATGGAGAGTTGATTCCTTTTGGATGTTGTAGTC-CGC 176520 Query 27081 ATGT-TGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | | | || ||||||| | || || || ||| | || || | ||| || || || || Sbjct 176519 AAGAGTTCGGCCGTCTTCCAATTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGG 176460 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || ||||||| |||| | | || | ||||| | | |||||| Sbjct 176459 AATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCAAC 176400 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | ||| || | |||||||| || || ||||| ||||||||||| Sbjct 176399 CTCCAAAGTGATCGTCTTGCCCGTGAGGGTCTTCACGAAGATTTGCAT 176352 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | ||| || | |||||||| | || || || ||||| || |||||||| Sbjct 182780 CCTCCTCTCAAACGGAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCG 182721 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | ||||||||||| ||||| ||| | || || | ||| || || || || Sbjct 182720 AGAGTGCGGCCATCTTCGAGCTGCTTACCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGA 182661 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || ||| || |||| | | || || ||||| | | ||| || Sbjct 182660 ATCCCTTCCTTGTCCTGGATTTTTGCCTTCACGTTGTCCACGGTGTCGGAGCTTTCCACC 182601 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || ||||| || | || || || || || ||||| |||||||||||| || Sbjct 182600 TCGAGAGTGATCGTCTTTCCTGTGAGGGTCTTCACGAAGATTTGCATACCT 182550 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | || || || ||||| || |||||||| | | | || | |||||| Sbjct 182990 ACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCGAGGGTACGACCATCTTCG 182931 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| ||||| ||| | || | | || ||||| || || | ||||| || || Sbjct 182930 AGCTGCTTACCAGCGAAGATCAATCTTTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGA 182871 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| ||| | | | || | |||||| | | || ||||| ||||| || | |||| Sbjct 182870 ATCTTAGCTTTAACGTTGTCGATAGTGTCGGAGCTCTCCACTTCCAGAGTGATCGTTTTG 182811 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| ||||| || ||||| ||||| Sbjct 182810 CCGGTCAGCGTTTTTACGAAGATCTGCAT 182782 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | || || || ||||| || |||||||| | | |||| |||||||| Sbjct 182534 ACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCGTCTTCG 182475 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | || | | ||| || || || || | ||||| || || Sbjct 182474 AGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATTCCCTCCTTGTCCTGA 182415 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | || | ||||| | | ||| || || ||||| || | || Sbjct 182414 ATCTTGGCCTTCACATTATCGATGGTGTCGGAGCTTTCCACCTCCAGAGTAATTGTCTTA 182355 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| || || ||||| ||||| ||||| Sbjct 182354 CCCGTGAGGGTCTTCACGAAGATCTGCAT 182326 >seq4017 Length=874442 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | ||| || | || | ||| || ||||| || ||||||||||| ||||| | Sbjct 473569 CCTCCCCTCAATCGTAGCACAAGATGCAAGGTAGATTCCTTTTGAATATTATAGTCTGCC 473510 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | || |||||||| |||||||| | || | ||||| || || || || Sbjct 473509 AAGGTACGACCATCCTCGAGCTGCTTACCGGCAAAGATCAATCGCTGCTGGTCGGGAGGA 473450 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| ||||| |||||| | |||| | | || | || |||| | |||||| Sbjct 473449 ATACCCTCCTTATCCTGGATCTTTGTCTTCACGTTGTCGATGGTATCTGAGCTTTCAACC 473390 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | ||| || | ||| || |||| || || |||||||| |||||| Sbjct 473389 TCCAAAGTGATGGTTTTTCCAGTCAATGTCTTGACAAAGATCTGCATA 473342 Score = 102 bits (112), Expect = 7e-17 Identities = 163/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||||| ||| || | || | ||||| || |||||||| ||||||||| | Sbjct 472657 CCACCTCTCAACCTCAACACGAGGTGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGCC 472598 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | |||| || ||||||||||| ||| | || | |||||| || || || || Sbjct 472597 AGAGTTCTACCGTCCTCAAGCTGTTTACCTGCGAAGATCAAACGCTGCTGGTCTGGGGGA 472538 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| ||||| |||||| | |||| | || | ||||| | ||||| Sbjct 472537 ATACCCTCCTTATCTTGGATCTTAGTCTTCACATTATCGATGGTGTCGGAACTCTCAACC 472478 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 || ||||| || | || || |||| || || || |||||||||||| || || Sbjct 472477 TCGAGAGTAATGGTCTTTCCTGTCAACGTCTTGACGAAGATTTGCATACCTCCT 472424 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || ||||| || ||||||||| || | | | | ||||||||||| || ||| Sbjct 473083 GTAGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTCCTTCCATCTTCGAGCTGCTTGCCG 473024 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || | ||||| ||||| || || | |||||| ||||| ||| || | ||| Sbjct 473023 GCGAAGATCAATCGCTGCTGATCTGGAGGAATACCCTCCTTATCTTGGATTTTAGTCTTC 472964 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | |||||| | || || || | ||||||| ||||| |||||||| Sbjct 472963 ACATTGTCGATAGTGTCAGAACTCTCCACCTCCAAGGTTATAGTCTTGCCTGTCAGAGTC 472904 Query 27231 TTCACAAAGATTTGCATAGCTGCT 27254 ||||| || || |||||| || || Sbjct 472903 TTCACGAAAATCTGCATACCTCCT 472880 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGT 27093 ||| ||||| || || ||||| || ||||| || || || || || |||| | | | | Sbjct 472187 CAAGACCAAGTGCAATGTAGACTCCTTTTGGATGTTATAATCAGCCAATGTC-CTCCCAT 472129 Query 27094 CTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTAT 27153 | ||||| || || |||||| |||| || | ||| || || || || | |||||| || | Sbjct 472128 CCTCGAGTTGCTTGCCGGCGAAAATCAGCCTCTGCTGGTCGGGAGGAATACCCTCCTTGT 472069 Query 27154 CGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAG 27213 | |||||| | || | | || | || || | | ||| || || ||||| || | Sbjct 472068 CCTGAATCTTGGTCTTAACATTGTCGATCGTATCGGAGCTTTCGACCTCAAGAGTGATGG 472009 Query 27214 ATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||||| || ||||||||||| ||||| Sbjct 472008 TCTTCCCCGTCAATGTCTTCACAAAGATCTGCAT 471975 >seq2625 Length=346021 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| |||| || ||| || | ||| || || || |||||||| || ||||||||| | Sbjct 280421 CCTCCTCGCAGCCTCAACACAAGATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCGGCC 280362 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| |||||||||| |||||||||||| |||| | ||||| || || || || Sbjct 280361 AGCGTGCGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCGCTGCTGGTCAGGGGGA 280302 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| || || | |||| | || | || || | | ||| || Sbjct 280301 ATGCCCTCCTTATCTTGAATTTTCGTCTTCACATTGTCGATCGTATCAGAGCTTTCGACC 280242 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || | || ||||| || || || || ||||| ||||| Sbjct 280241 TCAAGAGTGATGGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 280195 Score = 102 bits (112), Expect = 7e-17 Identities = 164/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| | ||| | || || | ||| | ||| || ||||| ||||| ||||||||| Sbjct 280651 TGCCTCCCCTCAATCTCAGAACAAGATGAAGCGTGGACTCTTTCTGAATGTTGTAGTCGG 280592 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | || |||| || || ||||| |||||| | || | | ||| ||||| || | Sbjct 280591 CCAGCGTCCGGCCGTCCTCTAGTTGTTTGCCGGCGAAGATCAACCTCTGCTGATCTGGGG 280532 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| ||||| |||||| | || | | || | ||||| | || | Sbjct 280531 GGATTCCCTCCTTATCCTGGATCTTAGTCTTGACATTGTCGATGGTGTCAGAACTCTCGA 280472 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 | || || || || | ||| |||||||||||||| || || ||||||||| || || Sbjct 280471 CCTCGAGGGTAATGGTTTTCCCCGTCAGAGTTTTAACGAAAATTTGCATACCTCCT 280416 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | || || ||| |||||||| | ||||| || ||||| || ||||||||| | Sbjct 281789 CCACCTCTCAGCCTCAAAACCAAATGGAGGGTAGATTCCTTTTGGATGTTGTAGTCGGCC 281730 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | | || || || || || ||||| |||| | | ||| ||||| || || Sbjct 281729 AACGTCCTCCCATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAGGG 281670 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || ||||| |||||| | | || | ||||| | | || || Sbjct 281669 ATGCCTTCCTTGTCCTGAATCTTCGTTTTCACGTTATCAATCGTGTCAGAGCTCTCCACC 281610 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 || |||||||| | ||||| || || ||||| || |||||||||||| || || Sbjct 281609 TCAAGAGTTATGGTCTTGCCGGTGAGGGTTTTAACGAAGATTTGCATACCTCCT 281556 >seq3072 Length=975934 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||| | | || || ||| |||||||| | ||||| || ||||| || || ||| || | Sbjct 271809 CCTTCCCTCAGCCTCAAGACCAAATGGAGGGTAGACTCCTTTTGGATGTTTTAGCCGGCC 271750 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || |||| || || || || || ||| |||| | | |||| || || || || Sbjct 271749 AAGGTACGACCGTCCTCAAGTTGCTTCCCAGCGAAAATTAAAAGCTGCTGGTCTGGTGGA 271690 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||||||||| |||||| | |||| | | || | ||||| | | ||||| Sbjct 271689 ATGCCCTCTTTATCTTGAATCTTGGTCTTCACGTTGTCAATCGTGTCGGAGCTCTCAACC 271630 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCA 27246 || ||||| || | || || |||| || |||||||| || |||| Sbjct 271629 TCAAGAGTGATGGTCTTACCGGTCAATGTCTTCACAAAAATCTGCA 271584 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | || || ||| |||||||| | ||||| || ||||| || ||||||||| | Sbjct 271581 CCACCTCTCAGCCTCAACACCAAATGGAGGGTAGATTCGTTTTGGATGTTGTAGTCGGCC 271522 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | | || || || || || ||||| |||| | | ||| ||||| || || Sbjct 271521 AACGTCCTCCCATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAGGG 271462 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || ||||| |||||| | | || | ||||| | | || || Sbjct 271461 ATGCCTTCCTTGTCCTGAATCTTCGTTTTCACGTTGTCAATCGTGTCAGAGCTCTCCACC 271402 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||||||| | |||||||| || | ||| || ||||||||||| Sbjct 271401 TCAAGAGTTATGGTCTTGCCCGTGAGGGCTTTAACGAAGATTTGCAT 271355 >seq4073 Length=488838 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 || || ||||| ||||| || || || || ||| ||| | |||||||| || ||||| Sbjct 172803 GTGGACTCTTTCTGAATGTTATAATCTGCAAGAGTT-CGCCCATCTTCGAGTTGCTTACC 172861 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 |||| | || | | ||| ||||| || || | ||| || || || ||||| ||| Sbjct 172862 GGCGAAGATCAACCTCTGCTGATCGGGAGGAATACCTTCCTTGTCCTGAATCTTCGCTTT 172921 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | | || | ||||| | | || || || ||||| || | ||||| ||||| || Sbjct 172922 GACGTTGTCGATGGTGTCCGAGCTCTCGACCTCCAGAGTGATGGTCTTGCCGGTCAGTGT 172981 Query 27230 TTTCACAAAGATTTGCATAGCTGCT 27254 |||||| |||||||||||| || || Sbjct 172982 TTTCACGAAGATTTGCATACCTCCT 173006 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| ||||| || || || || | ||| | ||||||||||| |||||| Sbjct 173031 GTGGACTCTTTCTGAATGTTATAATCTGCCAGAGTTCGCCCATCTTCGAGCTGCTTACCG 173090 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || | | ||| || || || || | ||| || || || ||||| ||| Sbjct 173091 GCGAAGATCAACCTCTGCTGGTCGGGAGGAATACCTTCCTTGTCCTGAATCTTCGCTTTG 173150 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | || || || ||||| || | ||||| |||| ||| Sbjct 173151 ACGTTGTCGATGGTGTCCGAGCTCTCGACCTCCAGAGTGATGGTCTTGCCGGTCAATGTT 173210 Query 27231 TTCACAAAGATTTGCATAGCTGCT 27254 ||||| |||||||||||| || || Sbjct 173211 TTCACGAAGATTTGCATACCTCCT 173234 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| ||||| || ||||| ||||| || | ||| | ||||||||||| |||||| Sbjct 173259 GTAGACTCTTTCTGTATATTATAGTCTGCCAGAGTTCGCCCATCTTCGAGCTGCTTACCG 173318 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || | | ||| ||||| || || | || ||||| || ||| || || Sbjct 173319 GCGAAGATCAACCTCTGCTGATCAGGAGGGATTCCTTCTTTGTCCTGGATTTTCGCCTTG 173378 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | ||| || |||| ||| || | ||||| |||| || Sbjct 173379 ACGTTGTCGATCGTGTCGGAGCTTTCCACCTCTAAAGTAATGGTCTTGCCAGTCAAGGTC 173438 Query 27231 TTCACAAAGATTTGCATAGCTGCT 27254 || ||||| || |||||| || || Sbjct 173439 TTGACAAAAATCTGCATACCTCCT 173462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424912974940344