Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq2625 145 7e-30 seq3072 134 1e-26 seq487 134 1e-26 seq4017 122 8e-23 seq4073 111 1e-19 seq3627 98.7 9e-16 >seq2625 Length=346021 Score = 145 bits (160), Expect = 7e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||||| ||| | || |||||||| ||||| || Sbjct 281791 ATGCAGATTTTTGTGAAGACATTGACCGGTAAGACCATCACTCTTGAGGTGGAGAGCTCT 281850 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | || ||| || ||||| ||||| |||||||| || || ||||| Sbjct 281851 GACACGATTGACAACGTGAAAACGAAGATTCAGGACAAGGAAGGCATCCCTCCAGATCAG 281910 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || ||| | || ||| || ||| | |||| |||||| Sbjct 281911 CAGAGGTTGATTTTTGCAGGAAAGCAACTTGAGGACGGTCGTACCTTGGCCGACTACAAC 281970 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||||| ||| | |||||||| ||| | || |||| || || Sbjct 281971 ATTCAAAAGGAGTCTACCCTCCATTTGGTCTTGAGGCTGAGGGGAGGAAT 282020 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| || ||||||||| | || |||||||| ||||| || Sbjct 281563 ATGCAAATCTTCGTTAAAACCCTCACCGGCAAGACCATAACTCTTGAGGTGGAGAGCTCT 281622 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | || ||| || ||||| ||||| |||||||| || || ||||| Sbjct 281623 GACACGATTGATAACGTGAAAACGAAGATTCAGGACAAGGAAGGCATCCCTCCAGATCAG 281682 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||||| || ||| | || || | ||| | |||| |||||| Sbjct 281683 CAGAGGTTGATTTTTGCCGGAAAGCAACTTGAGGATGGGAGGACGTTGGCCGACTACAAC 281742 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || ||| | |||||||||||| | || | ||||| || Sbjct 281743 ATCCAAAAGGAATCTACCCTCCATTTGGTTTTGAGGCTGAGAGGTGGTAT 281792 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| |||| |||||| | |||||| | || || || ||| Sbjct 281335 ATGCAGATTTTCGTCAAAACCTTGACTGGCAAGACGATTACTTTGGAGGTTGAGAGTTCC 281394 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| |||||||||||||| || || || || || || || Sbjct 281395 GACACCATTGACAATGTGAAAACCAAAATTCAAGACAAGGAGGGAATTCCTCCAGACCAG 281454 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||||| ||||| | ||||| || ||| | ||||||||||| Sbjct 281455 CAGAGATTGATTTTTGCCGGGAAACAGCTTGAAGATGGTCGGACACTCGCCGATTACAAC 281514 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || |||||||| || ||||| |||||||| Sbjct 281515 ATCCAAAAGGAATCTACCTTGCATTTGGT 281543 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || || ||| | || |||||||| || ||| || Sbjct 280195 ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACCATCACTCTTGAGGTCGAAAGCTCT 280254 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | || || ||||||||||| || || ||||| || || || || Sbjct 280255 GATACGATCGACAATGTGAAGACGAAAATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 280314 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | |||||| |||||| | |||||| || || | |||| |||||| Sbjct 280315 CAGCGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGCACGCTGGCCGACTACAAC 280374 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| ||||| || || ||| | || ||| | |||| || || || Sbjct 280375 ATCCAAAAAGAGTCCACTTTGCATCTTGTGTTGAGGCTGCGAGGAGGTAT 280424 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || || ||| |||| || || || || ||| ||| Sbjct 281107 ATGCAGATTTTCGTCAAGACTCTTACAGGGAAGACTATCACCCTGGAGGTTGAAAGCTCC 281166 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || || || ||||| || ||||| || ||||| ||||| Sbjct 281167 GATACTATCGACAACGTGAAGACTAAGATCCAAGATAAGGAAGGAATTCCACCAGATCAG 281226 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCC-GATTACAA 27166 ||||| || || | ||||| || || ||||| ||| | ||| || | | || ||||| Sbjct 281227 CAGCGGTTGATTTTTGCCGGTAAGCAGTTGGAGGACGGC-CGAACGCTGGCTGACTACAA 281285 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| ||||||||||| || | ||| |||| ||| | ||| |||| || || Sbjct 281286 CATCCAAAAGGAGTCCACTCTCCATCTGGTGTTGAGATTGAGGGGAGGTAT 281336 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||||||||| || || | ||||| || || || || || Sbjct 280423 ATGCAAATTTTCGTTAAAACTCTGACGGGGAAAACCATTACCCTCGAGGTCGAGAGTTCT 280482 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || || || || || || || || ||||| Sbjct 280483 GACACCATCGACAATGTCAAGACTAAGATCCAGGATAAGGAGGGAATCCCCCCAGATCAG 280542 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||||||||||||| | || ||| | ||| | |||| |||||| Sbjct 280543 CAGAGGTTGATCTTCGCCGGCAAACAACTAGAGGACGGCCGGACGCTGGCCGACTACAAC 280602 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| || | ||| | ||| || | ||| |||| ||||| Sbjct 280603 ATTCAGAAAGAGTCCACGCTTCATCTTGTTCTGAGATTGAGGGGAGGCAT 280652 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||||||||| || || || || || ||| | || || | || || ||| || Sbjct 280878 CATGCAGATATTTGTGAAGACGCTTACAGGAAAGACCATCACCTTGGAGGTCGAAAGCTC 280937 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | |||||| || || ||||| || || || || || || || || Sbjct 280938 CGACACCATCGACAACGTCAAAACCAAGATCCAAGATAAGGAGGGTATTCCTCCAGACCA 280997 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCG-TTTCCGATTACA 27165 |||| | || || | || || || || ||||| ||| | ||| || | ||||||| | Sbjct 280998 ACAGAGATTGATCTTTGCAGGTAAGCAGTTGGAGGAC-GGCCGAACGCTGGCCGATTATA 281056 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | || || |||||||| || | ||| | || ||| | ||| |||| || || Sbjct 281057 ATATACAGAAGGAGTCTACTCTCCATCTCGTCTTGAGATTGAGGGGAGGTAT 281108 >seq3072 Length=975934 Score = 134 bits (148), Expect = 1e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26989 TGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCG 27048 ||||||| ||||| || || ||||||| ||| | || |||||||| || || |||| Sbjct 271584 TGCAGATTTTTGTGAAGACATTGACCGGTAAGACCATCACTCTTGAGGTTGAGAGCTCCG 271643 Query 27049 ACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAAC 27108 || ||||||| | || || || |||||||| ||||| ||||| ||||| || || | Sbjct 271644 ACACGATTGACAACGTGAAGACCAAGATTCAAGATAAAGAGGGCATTCCACCAGACCAGC 271703 Query 27109 AGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACA 27168 ||| |||||| | ||| || || ||| | || ||| || ||| | ||| || |||| Sbjct 271704 AGCTTTTAATTTTCGCTGGGAAGCAACTTGAGGACGGTCGTACCTTGGCCGGCTAAAACA 271763 Query 27169 TTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 | ||||||||||| ||| | |||||||| ||| Sbjct 271764 TCCAAAAGGAGTCTACCCTCCATTTGGTCTTG 271795 >seq487 Length=466406 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || |||||||| || || | || ||||| |||||||| || Sbjct 183333 ATGCAAATCTTCGTCAAGACTCTGACGGGGAAAACCATCACTCTGGAAGTGGAGAGCTCT 183392 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| ||||| || ||||| || || || || ||||| || Sbjct 183393 GACACCATCGACAATGTGAAAGCCAAAATCCAGGACAAGGAGGGAATTCCTCCCGACCAG 183452 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||| ||||| || ||||||| || || | ||||||||||| Sbjct 183453 CAGCGATTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGTACACTGGCCGATTACAAC 183512 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||||| |||||||| || ||| |||| |||||| |||| || || Sbjct 183513 ATTCAAAAAGAGTCGACGTTGCATCTGGTGTTGCGTCTGCGAGGAGG 183559 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||||||| | || || || || ||||| ||| Sbjct 176124 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTGGAGAGCTCC 176183 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| || ||||| ||||| || || || || || || || Sbjct 176184 GACACCATCGACAACGTGAAAGCTAAGATTCAGGACAAGGAGGGAATTCCCCCAGACCAG 176243 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| ||||| |||||||||||| | || | | || |||||| Sbjct 176244 CAGAGGCTGATTTTCGCTGGCAAGCAATTGGAAGACGGCCGAACTCTCGCGGACTACAAC 176303 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||||||||| | || ||||| | || ||| |||| || || Sbjct 176304 ATCCAAAAGGAGTCGACTCTTCACTTGGTGCTTCGGTTGAGGGGAGGGAT 176353 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || |||||||| ||||||||||| | || ||||| |||||||| ||| Sbjct 182782 ATGCAGATCTTCGTAAAAACGCTGACCGGCAAAACGATCACTCTGGAAGTGGAGAGCTCC 182841 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| || ||||| ||||| || ||||| || || ||||| Sbjct 182842 GACACTATCGACAACGTTAAAGCTAAGATTCAGGACAAGGAGGGCATTCCTCCTGATCAG 182901 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||| || || || | ||||| || ||| | | || |||||| Sbjct 182902 CAAAGATTGATCTTCGCTGGTAAGCAGCTCGAAGATGGTCGTACCCTCGCAGACTACAAC 182961 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || | |||||||| | ||| | |||| || || Sbjct 182962 ATCCAAAAGGAGTCCACTCTCCATTTGGTGCTTCGTCTCAGGGGAGGTAT 183011 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || ||||| ||| |||| ||| | ||||| ||| ||| Sbjct 176580 ATGCAGATTTTTGTGAAAACACTCACCGGTAAGACTATCACTTTAGAAGTAGAAAGCTCC 176639 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | |||||| |||||||| ||||| || || || || || || || Sbjct 176640 GATACCATTGATAACGTCAAAGCCAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 176699 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||||| || || | || ||| | || || | || |||||| Sbjct 176700 CAGAGGCTGATCTTTGCCGGTAAGCAGCTCGAGGACGGCCGAACTCTTGCAGACTACAAC 176759 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || | |||||||| | || ||| |||| || || Sbjct 176760 ATCCAAAAGGAGTCCACTCTTCATTTGGTGCTTCGGTTGAGGGGAGGTAT 176809 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || |||||||| ||||| | || || || || ||||| ||| Sbjct 176808 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAAACCATCACCCTCGAGGTGGAGAGCTCC 176867 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | |||||| || || || ||||| || || || || || || || Sbjct 176868 GACACTATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAG 176927 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||| || || |||||||| | ||| | | || |||||| Sbjct 176928 CAGAGGTTGATCTTCGCCGGTAAGCAGTTGGAAGATGGCCGCACCCTCGCAGACTACAAC 176987 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || | |||||||| | ||| || |||| || || Sbjct 176988 ATCCAAAAGGAGTCTACTCTCCATTTGGTGCTTCGTCTGAGGGGAGGTAT 177037 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || || ||| | |||||||| || |||||| ||| Sbjct 177036 ATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACAATTACTCTGGAGGTGGAAAGCTCC 177095 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||||||||||||||| || || || || || Sbjct 177096 GACACCATCGATAATGTCAAGGCTAAGATTCAAGACAAAGAAGGAATTCCCCCAGACCAG 177155 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||||||||| || | ||||| | || | | || || ||| Sbjct 177156 CAGAGACTGATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGAACTCTCGCGGACTATAAC 177215 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || | |||||||| | ||| | |||| || || Sbjct 177216 ATCCAAAAGGAGTCCACTCTCCATTTGGTGCTTCGTCTCAGGGGAGGTAT 177265 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||||||||||||||| | || ||||| || || ||| || Sbjct 177492 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACCATCACTCTGGAGGTAGAAAGCTCG 177551 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | || || || ||||| ||||| ||||| || || || || || Sbjct 177552 GATACGATCGATAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATTCCCCCAGACCAG 177611 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| ||||| || | ||||| | ||| | | || |||||| Sbjct 177612 CAGAGGCTGATCTTCGCTGGCAAGCAGCTCGAAGATGGCCGCACCCTCGCAGACTACAAC 177671 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| || | |||||||| | ||| || |||| ||||| Sbjct 177672 ATTCAGAAGGAGTCTACTCTCCATTTGGTGCTTCGTCTGAGGGGAGGCAT 177721 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || || ||| | |||||||| || |||||| ||| Sbjct 182326 ATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACAATTACTCTGGAGGTGGAAAGCTCC 182385 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || ||||| ||||| || || || || || || || Sbjct 182386 GACACCATCGATAATGTGAAGGCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAG 182445 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||| || || || | |||||| | ||| || | || |||||| Sbjct 182446 CAGAGGTTGATCTTCGCTGGAAAGCAGCTCGAAGACGGCCGCACCCTTGCAGACTACAAC 182505 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || | |||||||| | ||| | |||| || || Sbjct 182506 ATCCAAAAGGAGTCCACTCTCCATTTGGTGCTTCGTCTCAGGGGAGGTAT 182555 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || |||||| | || ||| | || || ||| ||| Sbjct 176352 ATGCAAATCTTCGTGAAGACCCTCACGGGCAAGACGATCACTTTGGAGGTTGAAAGCTCC 176411 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || ||||| || || || || || || || Sbjct 176412 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCAG 176471 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| ||||| |||||||||||| | || || | || |||||| Sbjct 176472 CAGAGGCTGATCTTCGCTGGCAAGCAATTGGAAGACGGCCGAACTCTTGCGGACTACAAC 176531 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || | ||||||||| | |||||| | || || || Sbjct 176532 ATCCAAAAGGAATCAACTCTCCATTTGGTTCTTCGTTTGAGAGGAGGTAT 176581 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || || ||| | || ||||| || |||||| ||| Sbjct 182554 ATGCAAATCTTCGTGAAGACCCTCACAGGAAAGACGATCACTCTCGAGGTGGAAAGCTCC 182613 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | | || | || || |||||| || ||||| ||||| || ||||| || || Sbjct 182614 GACACCGTGGACAACGTGAAGGCAAAAATCCAGGACAAGGAAGGGATTCCACCAGACCAG 182673 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || || || | ||||| | || | | || |||||| Sbjct 182674 CAGAGGCTGATCTTCGCTGGTAAGCAGCTCGAAGATGGCCGCACTCTCGCAGACTACAAC 182733 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || | |||||||| | |||||| | || || || Sbjct 182734 ATCCAAAAGGAGTCCACTCTCCATTTGGTGCTCCGTTTGAGAGGAGGAAT 182783 Score = 86.0 bits (94), Expect = 5e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||||||||||| ||| | || ||||| || |||||| || Sbjct 183010 ATGCAAATCTTCGTCAAAACTCTGACCGGAAAGACCATCACTCTGGAGGTGGAAAGCTCG 183069 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || ||||| ||||| ||||| || ||||| || || Sbjct 183070 GACACGATCGATAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATTCCACCAGACCAG 183129 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 ||| | | || | ||| ||||| || | ||||| Sbjct 183130 CAGAGGCTGATCTTCGCTGGCAAGCAGCTCGAAGA 183164 >seq4017 Length=874442 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || |||||||| |||||| | || || | || ||||| ||| Sbjct 473115 ATGCAGATTTTCGTGAAGACTCTGACAGGCAAGACCATCACCTTGGAGGTGGAGAGTTCC 473174 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || |||||||||||||| |||||||| || || || || Sbjct 473175 GACACCATCGACAATGTGAAGACCAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAG 473234 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||| || ||||| | ||||| | ||| | |||| || ||| Sbjct 473235 CAGCGATTGATCTTCGCTGGGAAACAGCTCGAAGATGGCAGGACTTTGGCCGACTATAAC 473294 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || | ||| | || ||||| ||| | ||||| || Sbjct 473295 ATCCAAAAGGAGTCTACTCTTCATCTTGTGTTGCGGTTGAGAGGTGGTAT 473344 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||| || ||| | || |||||||| || ||| ||| Sbjct 471975 ATGCAGATCTTTGTGAAGACATTGACGGGGAAGACCATCACTCTTGAGGTCGAAAGCTCC 472034 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | || || || ||||| ||||| || || || || ||||| || Sbjct 472035 GATACGATCGACAATGTTAAGACCAAGATTCAGGACAAGGAGGGTATTCCTCCCGACCAG 472094 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||||||||| ||| | || || | ||| | | ||||| ||| Sbjct 472095 CAGAGGCTGATTTTCGCCGGCAAGCAACTCGAGGATGGGAGGACATTGGCTGATTATAAC 472154 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || || || ||||| ||| | || ||||||| || Sbjct 472155 ATCCAAAAGGAGTCTACATTGCACTTGGTCTTGAGACTGAGGGGTGGTAT 472204 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || |||||||| |||||| |||| || | || ||||| || Sbjct 472887 ATGCAGATTTTCGTGAAGACTCTGACAGGCAAGACTATAACCTTGGAGGTGGAGAGTTCT 472946 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||||| ||||| || || || || || || ||||| Sbjct 472947 GACACTATCGACAATGTGAAGACTAAAATCCAAGATAAGGAGGGTATTCCTCCAGATCAG 473006 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||||||||| || | ||||| | |||| | |||| |||||| Sbjct 473007 CAGCGATTGATCTTCGCCGGCAAGCAGCTCGAAGATGGAAGGACCCTGGCCGACTACAAC 473066 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| ||| | || | || || | ||| | ||||| || Sbjct 473067 ATCCAAAAGGAGTCTACCCTTCACCTCGTCCTGAGGTTGAGAGGTGGTAT 473116 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| |||||| | || || | || ||||| ||| Sbjct 472659 ATGCAGATCTTCGTGAAGACATTGACTGGCAAGACCATCACCTTGGAGGTGGAGAGTTCC 472718 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||||| |||||||| || || || || || || || Sbjct 472719 GACACCATCGACAATGTGAAGACCAAAATCCAAGACAAGGAGGGTATCCCTCCAGACCAG 472778 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| |||| | ||| ||||| || | || ||| | |||| || |||| |||||| Sbjct 472779 CAGCGACTAATCTTCGCAGGCAAGCAGCTTGAGGACGGGAGGACCCTTGCCGACTACAAC 472838 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 || ||||||||||| ||| | ||| Sbjct 472839 ATCCAAAAGGAGTCCACCCTTCAT 472862 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || |||| || ||| | |||||||| || || || ||| Sbjct 472431 ATGCAAATCTTCGTCAAGACGTTGACAGGAAAGACCATTACTCTCGAGGTTGAGAGTTCC 472490 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || ||||| || || || || || || || || Sbjct 472491 GACACCATCGATAATGTGAAGACTAAGATCCAAGATAAGGAGGGTATTCCCCCAGACCAG 472550 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | ||| || ||||| | || ||| || || | |||| |||||| Sbjct 472551 CAGCGTTTGATCTTCGCAGGTAAACAGCTTGAGGACGGTAGAACTCTGGCCGACTACAAC 472610 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||||| ||| | || | || ||| | ||| | ||||| || Sbjct 472611 ATTCAAAAGGAGTCTACCCTCCACCTCGTGTTGAGGTTGAGAGGTGGTAT 472660 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| |||| || ||| | ||||| || || ||||| || Sbjct 472203 ATGCAGATCTTCGTCAAGACTTTGACGGGTAAGACAATTACCCTCGAGGTGGAGAGCTCT 472262 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||||||||||| || || || || || || || || Sbjct 472263 GACACCATCGACAATGTAAAGACTAAAATTCAAGATAAGGAGGGTATTCCCCCAGACCAG 472322 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | |||||||| || | || || | ||| | | ||||||||| Sbjct 472323 CAGCGTCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGAAGGACGCTGGCTGATTACAAC 472382 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 || ||||||||||| ||| | || ||||| || Sbjct 472383 ATCCAAAAGGAGTCCACCCTTCACCTGGTTCTG 472415 >seq4073 Length=488838 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| |||||||||||| | || ||||| || || || || Sbjct 172999 ATGCAAATCTTCGTGAAAACACTGACCGGCAAGACCATCACTCTGGAGGTCGAGAGCTCG 172940 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | |||||| || ||||| ||||| ||||| || || |||||||| Sbjct 172939 GACACCATCGACAACGTCAAAGCGAAGATTCAGGACAAGGAAGGTATTCCTCCCGATCAG 172880 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||| || ||| | ||||| | || || | ||||| ||| Sbjct 172879 CAGAGGTTGATCTTCGCCGGTAAGCAACTCGAAGATGGGCGAACTCTTGCAGATTATAAC 172820 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 ||||| || ||||| ||| | ||| Sbjct 172819 ATTCAGAAAGAGTCCACCCTGCAT 172796 Score = 100 bits (110), Expect = 2e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||| |||||| | |||||| | || |||||| ||| Sbjct 173455 ATGCAGATTTTTGTCAAGACCTTGACTGGCAAGACCATTACTTTAGAGGTGGAAAGCTCC 173396 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| ||||| || ||||||||||| || || || ||||| Sbjct 173395 GACACGATCGACAACGTCAAGGCGAAAATCCAGGACAAAGAAGGAATCCCTCCTGATCAG 173336 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 ||| | || || | |||||| || || | ||||| Sbjct 173335 CAGAGGTTGATCTTCGCCGGTAAGCAGCTCGAAGA 173301 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || || || ||||| || ||| | || || | || ||||| ||| Sbjct 173911 ATGCAGATATTCGTGAAGACGCTGACGGGGAAGACCATCACGTTGGAGGTGGAGAGCTCC 173852 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | || ||| || ||||||||||| || || || || || || || Sbjct 173851 GATACGATCGATAATGTGAAAGTTAAGATTCAAGACAAGGAGGGGATCCCTCCTGACCAG 173792 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||||| || | || || || || | | ||||||||| Sbjct 173791 CAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACTCTGGCGGATTACAAC 173732 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 || || ||||||||||| | |||||||| ||| Sbjct 173731 ATCCAGAAGGAGTCGACTCTCCATTTGGTGTTG 173699 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| ||||||||||| | || ||||| || || || || Sbjct 173227 ATGCAAATCTTCGTGAAAACATTGACCGGCAAGACCATCACTCTGGAGGTCGAGAGCTCG 173168 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | |||||| || ||||| ||||| ||||| || || ||||| || Sbjct 173167 GACACCATCGACAACGTCAAAGCGAAGATTCAGGACAAGGAAGGTATTCCTCCCGACCAG 173108 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||| || || | ||||| | || | | ||||| ||| Sbjct 173107 CAGAGGTTGATCTTCGCCGGTAAGCAGCTCGAAGATGGGCGAACTCTGGCAGATTATAAC 173048 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 ||||| || ||||| ||| | ||| Sbjct 173047 ATTCAGAAAGAGTCCACCCTGCAT 173024 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || ||| | || || | || || || || Sbjct 173683 ATGCAGATTTTCGTCAAGACCTTGACTGGAAAGACCATCACGTTGGAGGTCGAGAGCTCT 173624 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || |||||||| ||||| || || || || || || || Sbjct 173623 GACACGATCGACAATGTGAAGGTCAAAATTCAGGACAAGGAGGGGATTCCTCCTGACCAG 173564 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||||| || | || || || || | | ||||||||| Sbjct 173563 CAGAGGCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACTCTGGCGGATTACAAC 173504 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 || |||||||| ||||| | |||||||||||| Sbjct 173503 ATCCAAAAGGAATCGACGCTTCATTTGGTTTTG 173471 >seq3627 Length=715207 Score = 98.7 bits (108), Expect = 9e-16 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 || |||||| |||| || ||||| ||||| | || || | || || | || || Sbjct 381757 ACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCGGATACCATCGACAATGTGAAGACC 381816 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || || || ||||| || || || || || ||||| ||||| || || | ||| ||||| Sbjct 381817 AAGATCCAGGACAAGGAGGGGATTCCTCCGGATCAGCAGCGATTGATCTTCGCGGGCAAG 381876 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACA 27190 || ||||||| || || || |||| |||||||||||||||||||| ||||| || Sbjct 381877 CAGCTGGAAGATGGTCGCACTCTTGCCGACTACAACATTCAAAAGGAGTCTACCTTGCA 381935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434895909282240