Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_028662.1 Length=50418 Score E Sequences producing significant alignments: (Bits) Value seq2905 91.5 5e-14 >seq2905 Length=1000 Score = 91.5 bits (100), Expect = 5e-14 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 32299 GAGCCGTGCTCCAGCACTGACTCATGTCCGATCTCCAGGATGTGGGCGAGGTAGTCCTCG 32358 ||||||||||| ||||| || || |||| ||||||||||||| || ||| ||||| Sbjct 575 GAGCCGTGCTCGAGCACGGAGAGGTGCCCGACCTCCAGGATGTGGCGGATGTACCCCTCG 634 Query 32359 TTCCTCGCCGTGGCCGGGTTCGGTCGGTTGAACGACCGATAGCAGTTCCTGCCAGCGAAC 32418 ||| ||||||| ||||||||| ||| ||||| | |||||| | ||| |||||| Sbjct 635 TTCGTCGCCGTCTTCGGGTTCGGCTTGTTCCACGACTGGTAGCAGGCGCGGCCGGCGAAC 694 Query 32419 TCGGC 32423 || || Sbjct 695 TCCGC 699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 161208079961720