Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq2625 143 2e-29 seq487 123 2e-23 seq4017 111 1e-19 seq4073 104 2e-17 seq3072 89.7 3e-13 >seq2625 Length=346021 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||||||||| || || |||||||| || || || | | Sbjct 280195 ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACCATCACTCTTGAGGTCGAAAGCTCT 280254 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || ||| | || || |||| || || || || || | || || || || Sbjct 280255 GATACGATCGACAATGTGAAGACGAAAA-TTCAAGATAAGGAGGGCATTCCCCCTGACCA 280313 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| || || || ||||| |||||||| ||||||| ||||| | | ||| ||||| Sbjct 280314 GCAGCGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGCACGCTGGCCGACTACAA 280373 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| |||||||||||||| || ||| | || || ||| |||||||||| Sbjct 280374 CATCCAAAAAGAGTCCACTTTGCATCTTGTGTTGAGGCTGCGAGGAGG 280421 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| |||||| | || || || ||||| ||| | || ||||| | Sbjct 281335 ATGCAGATTTTCGTCAAAACCTTGACTGGCAAGACGATTACTTTGGAGGTTGAGAGTTCC 281394 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||||| |||||| ||||| || || | || ||||| || Sbjct 281395 GACACCATTGACAATGTGAAAAC-CAAAATTCAAGACAAGGAGGGAATTCCTCCAGACCA 281453 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || |||||||| ||||| || ||||| | || || | | ||||||||| Sbjct 281454 GCAGAGATTGATTTTTGCCGGGAAACAGCTTGAAGATGGTCGGACACTCGCCGATTACAA 281513 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| || || || || ||||| || | ||| || ||||||| Sbjct 281514 CATCCAAAAGGAATCTACCTTGCATTTGGTCCTGAGGCTGAGAGGAGG 281561 Score = 125 bits (138), Expect = 5e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||||||||||||||| || || || || ||||| || || || | | Sbjct 281563 ATGCAAATCTTCGTTAAAACCCTCACCGGCAAGACCATAACTCTTGAGGTGGAGAGCTCT 281622 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| || | ||||| || ||| ||||| ||||| | || |||||||| Sbjct 281623 GACACGATTGATAACGTGAAAAC-GAAGATTCAGGACAAGGAAGGCATCCCTCCAGATCA 281681 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || |||||||| || ||||| || || | | || || | ||| ||||| Sbjct 281682 GCAGAGGTTGATTTTTGCCGGAAAGCAACTTGAGGATGGGAGGACGTTGGCCGACTACAA 281741 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| || || || | ||||| ||||| ||| || |||| || Sbjct 281742 CATCCAAAAGGAATCTACCCTCCATTTGGTTTTGAGGCTGAGAGGTGG 281789 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || | || || || || |||||||| || || || | | Sbjct 281791 ATGCAGATTTTTGTGAAGACATTGACCGGTAAGACCATCACTCTTGAGGTGGAGAGCTCT 281850 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| || | ||||| || ||| ||||| ||||| | || |||||||| Sbjct 281851 GACACGATTGACAACGTGAAAAC-GAAGATTCAGGACAAGGAAGGCATCCCTCCAGATCA 281909 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| || || ||||| || |||| || || || | ||| ||||| Sbjct 281910 GCAGAGGTTGATTTTTGCAGGAAAGCAACTTGAGGACGGTCGTACCTTGGCCGACTACAA 281969 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| ||||| ||||| || | ||||| || || ||| || | |||||| Sbjct 281970 CATTCAAAAGGAGTCTACCCTCCATTTGGTCTTGAGGCTGAGGGGAGGA 282018 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||||||||| || ||||| ||||| || || ||||| || || | Sbjct 280423 ATGCAAATTTTCGTTAAAACTCTGACGGGGAAAACCATTACCCTCGAGGTCGAGAGTTCT 280482 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || || || | | || || || || | || |||||||| Sbjct 280483 GACACCATCGACAATGTCAAGACTAAGA-TCCAGGATAAGGAGGGAATCCCCCCAGATCA 280541 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || |||||||||||||| || |||| || || | | ||| ||||| Sbjct 280542 GCAGAGGTTGATCTTCGCCGGCAAACAACTAGAGGACGGCCGGACGCTGGCCGACTACAA 280601 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || ||||||||||| | ||| | ||| | || ||| | ||||| Sbjct 280602 CATTCAGAAAGAGTCCACGCTTCATCTTGTTCTGAGATTGAGGGGAGG 280649 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || |||||||| ||||| ||||| | || || || | | Sbjct 280651 ATGCAGATCTTCGTGAAGACGCTCACGGGGAAAACCATCACGTTGGAGGTCGAAAGCTCT 280710 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| || | ||| |||||| ||||| || || | || |||||||| Sbjct 280711 GACACAATTGACATCGTGAAAACCAAAATTCAGGACAAGGAGGGAATCCCTCCAGATCAG 280770 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || ||||| ||||| || ||||||| | || || | | || |||||| Sbjct 280771 CAGAGGTTGATCTTTGCAGGCAAGCAGTTGGAAGATGGTCGTACCCTCGCGGACTACAAC 280830 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||||||||| || | ||| | || | |||||| | ||||| Sbjct 280831 ATCCAAAAAGAGTCGACTCTGCATCTTGTGCTGAGGTTGAGGGGAGG 280877 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || || || || || || ||||| || || ||||| | | Sbjct 281107 ATGCAGATTTTCGTCAAGACTCTTACAGGGAAGACTATCACCCTGGAGGTTGAAAGCTCC 281166 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| | || || | || || || || || || ||||| | || |||||||| Sbjct 281167 GATACTATCGACAACGTGAAGAC-TAAGATCCAAGATAAGGAAGGAATTCCACCAGATCA 281225 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| || || |||||||| || || |||| |||| || || | | || ||||| Sbjct 281226 GCAGCGGTTGATTTTTGCCGGTAAGCAGTTGGAGGACGGCCGAACGCTGGCTGACTACAA 281285 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| |||||||| | ||| | || || || ||| | ||||| Sbjct 281286 CATCCAAAAGGAGTCCACTCTCCATCTGGTGTTGAGATTGAGGGGAGG 281333 >seq487 Length=466406 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || ||||| || || || ||||| ||||| |||||||| ||||| || | | Sbjct 183332 AATGCAAATCTTCGTCAAGACTCTGACGGGGAAAACCATCACTCTGGAAGTGGAGAGCTC 183391 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| | || ||| | ||| | |||| | ||||| || || | || || || | Sbjct 183392 TGACACCATCGACAATGTGAAAGCCAAAA-TCCAGGACAAGGAGGGAATTCCTCCCGACC 183450 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||||| || || || || ||||| || |||||||| | || || | | |||||||| Sbjct 183451 AGCAGCGATTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGTACACTGGCCGATTACA 183510 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 |||| ||||||||||| || || ||| | || || | ||||||||||| Sbjct 183511 ACATTCAAAAAGAGTCGACGTTGCATCTGGTGTTGCGTCTGCGAGGAGGA 183560 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || |||||||| ||||| |||||||||||||| || || | | Sbjct 182554 ATGCAAATCTTCGTGAAGACCCTCACAGGAAAGACGATCACTCTCGAGGTGGAAAGCTCC 182613 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| || || | | || |||||| ||||| ||||| | || ||||| || Sbjct 182614 GACACCGTGGACAACGTGAAGGCAAAAATCCAGGACAAGGAAGGGATTCCACCAGACCAG 182673 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || || || || || || ||||| | |||||| | | || |||||| Sbjct 182674 CAGAGGCTGATCTTCGCTGGTAAGCAGCTCGAAGATGGCCGCACTCTCGCAGACTACAAC 182733 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || ||||| |||||||| | ||||| || | | ||| |||||||| Sbjct 182734 ATCCAAAAGGAGTCCACTCTCCATTTGGTGCTCCGTTTGAGAGGAGGA 182781 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || ||||| ||||| || || || |||||| | ||||| || | | Sbjct 176580 ATGCAGATTTTTGTGAAAACACTCACCGGTAAGACTATCACTTTAGAAGTAGAAAGCTCC 176639 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | | ||| |||||| ||||| || || | || ||||| || Sbjct 176640 GATACCATTGATAACGTCAAAGCCAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 176699 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || |||||||| || || || || |||| || ||| | | || |||||| Sbjct 176700 CAGAGGCTGATCTTTGCCGGTAAGCAGCTCGAGGACGGCCGAACTCTTGCAGACTACAAC 176759 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| |||||||| | ||||| || | ||||| | ||||| Sbjct 176760 ATCCAAAAGGAGTCCACTCTTCATTTGGTGCTTCGGTTGAGGGGAGG 176806 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| ||||| || || || |||||||||||||| ||||| || | | Sbjct 182781 AATGCAGATCTTCGTAAAAACGCTGACCGGCAAAACGATCACTCTGGAAGTGGAGAGCTC 182840 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 |||||| | || || ||||| | || ||| ||||| || || | || || |||| Sbjct 182841 CGACACTATCGACAACGTTAAAGC-TAAGATTCAGGACAAGGAGGGCATTCCTCCTGATC 182899 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | || | || || || || || || || || ||||| | || || | | || |||| Sbjct 182900 AGCAAAGATTGATCTTCGCTGGTAAGCAGCTCGAAGATGGTCGTACCCTCGCAGACTACA 182959 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGT 23819 |||| ||||| |||||||| | ||||| || Sbjct 182960 ACATCCAAAAGGAGTCCACTCTCCATTTGGT 182990 Score = 102 bits (112), Expect = 6e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||||||||| || || || ||||| || || || | | Sbjct 177036 ATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACAATTACTCTGGAGGTGGAAAGCTCC 177095 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || | || ||||||||||| | || ||||| || Sbjct 177096 GACACCATCGATAATGTCAAGGCTAAGA-TTCAAGACAAAGAAGGAATTCCCCCAGACCA 177154 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || || |||||||| || || ||||| | || ||| | | || || || Sbjct 177155 GCAGAGACTGATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGAACTCTCGCGGACTATAA 177214 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| ||||| |||||||| | ||||| || Sbjct 177215 CATCCAAAAGGAGTCCACTCTCCATTTGGT 177244 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || ||||||||||| || ||||||||| | || ||||| | | Sbjct 176352 ATGCAAATCTTCGTGAAGACCCTCACGGGCAAGACGATCACTTTGGAGGTTGAAAGCTCC 176411 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| || || | || ||||| || Sbjct 176412 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCAG 176471 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || || ||||| ||| ||||||||| || ||| | | || |||||| Sbjct 176472 CAGAGGCTGATCTTCGCTGGCAAGCAATTGGAAGACGGCCGAACTCTTGCGGACTACAAC 176531 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| || || || | ||||| ||| | | ||| ||||||| Sbjct 176532 ATCCAAAAGGAATCAACTCTCCATTTGGTTCTTCGTTTGAGAGGAGG 176578 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||||||||| || || || ||||| || || || | | Sbjct 182326 ATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACAATTACTCTGGAGGTGGAAAGCTCC 182385 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || ||| ||||| || || | || || || || Sbjct 182386 GACACCATCGATAATGTGAAGGC-CAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCA 182444 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || || || || || || ||||||| ||||| | | || ||||| Sbjct 182445 GCAGAGGTTGATCTTCGCTGGAAAGCAGCTCGAAGACGGCCGCACCCTTGCAGACTACAA 182504 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| ||||| |||||||| | ||||| || Sbjct 182505 CATCCAAAAGGAGTCCACTCTCCATTTGGT 182534 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| ||||| | || ||||| ||||||||||| || || || | || Sbjct 177264 ATGCAAATCTTCGTCAAAACTTTGACTGGAAAGACGATCACTCTTGAGGTAGAAAGCTCG 177323 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || ||| | ||| | || ||| ||||| ||||| | || ||||| || Sbjct 177324 GATACGATCGATAATGTGAAAGC-TAAGATTCAGGACAAGGAAGGGATTCCCCCAGACCA 177382 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || || || || || || || ||||| | || ||| | | || ||||| Sbjct 177383 GCAGAGGCTGATCTTCGCTGGAAAGCAGCTCGAAGATGGCCGAACTCTCGCGGACTACAA 177442 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || || |||||||| | ||||| || Sbjct 177443 CATCCAGAAGGAGTCCACTCTCCATTTGGT 177472 Score = 86.0 bits (94), Expect = 4e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| || || || || || |||||||| || ||||| ||||| || || | Sbjct 182095 AACATGCAGATCTTTGTGAAGACGCTGACGGGAAAGACCATCACGCTCGAGGTCGAGAGC 182154 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | || || | || ||| | || | || | || || || || || | || || || Sbjct 182155 AGCGATACCATCGACAATGTGAAGGCCAAGA-TTCAGGATAAGGAGGGAATCCCCCCTGA 182213 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||| | || || ||||| || || || || ||||||| ||||| | | ||||| Sbjct 182214 CCAGCAGAGGTTGATCTTTGCTGGAAAGCAGCTCGAAGACGGCCGCACCCTTGCAGATTA 182273 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||||| || || |||||||| | || || || | ||||| | ||||| Sbjct 182274 CAACATCCAGAAGGAGTCCACCCTTCACTTGGTGCTTCGGTTGAGGGGAGG 182324 >seq4017 Length=874442 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||| | || || || || ||||||||||| || || | | Sbjct 473571 ATGCAGATCTTCGTGAAGACCTTGACCGGGAAGACTATCACTCTCGAGGTCGAAAGCTCT 473630 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | ||||| || || ||||| ||||| | || || ||||| Sbjct 473631 GACACCATCGACAATGTCAAAAC-CAAGATCCAGGACAAGGAAGGAATTCCTCCCGATCA 473689 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| || || || |||||||| | ||| || | | |||||||| Sbjct 473690 GCAGAGATTGATCTTTGCAGGAAAGCAGCTGGAAGATGGACGAACCCTGGCGGATTACAA 473749 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| || || | ||| | ||| | ||| ||||||| || Sbjct 473750 TATCCAAAAAGAATCAACTCTGCATCTTGTTCTGAGGCTGCGAGGTGG 473797 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || | ||||| || || || || ||||| || || | | Sbjct 472203 ATGCAGATCTTCGTCAAGACTTTGACGGGTAAGACAATTACCCTCGAGGTGGAGAGCTCT 472262 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || || |||| || || || || ||| | || ||||| || Sbjct 472263 GACACCATCGACAATGTAAAGACTAAAA-TTCAAGATAAGGAGGGTATTCCCCCAGACCA 472321 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || ||||||||||| || || || || | | | || | | |||||||| Sbjct 472322 GCAGCGTCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGAAGGACGCTGGCTGATTACAA 472381 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| |||||||| | || | ||| | || || ||||||| Sbjct 472382 CATCCAAAAGGAGTCCACCCTTCACCTGGTTCTGAGACTGAGAGGAGG 472429 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || || || || || || ||||| | || || || | Sbjct 473115 ATGCAGATTTTCGTGAAGACTCTGACAGGCAAGACCATCACCTTGGAGGTGGAGAGTTCC 473174 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || || |||||| ||||| ||||| | || ||||| || Sbjct 473175 GACACCATCGACAATGTGAAGAC-CAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCA 473233 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| || || || || || ||||| || ||||| | | ||||| | ||| || || Sbjct 473234 GCAGCGATTGATCTTCGCTGGGAAACAGCTCGAAGATGGCAGGACTTTGGCCGACTATAA 473293 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| ||||| || | ||| | || || ||||| |||| || Sbjct 473294 CATCCAAAAGGAGTCTACTCTTCATCTTGTGTTGCGGTTGAGAGGTGG 473341 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || || || || || || || || | || || || | Sbjct 472887 ATGCAGATTTTCGTGAAGACTCTGACAGGCAAGACTATAACCTTGGAGGTGGAGAGTTCT 472946 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || ||| | || || ||||| || || || ||| | || |||||||| Sbjct 472947 GACACTATCGACAATGTGAAGAC-TAAAATCCAAGATAAGGAGGGTATTCCTCCAGATCA 473005 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| || || || |||||||| || || ||||| | | | || | | ||| ||||| Sbjct 473006 GCAGCGATTGATCTTCGCCGGCAAGCAGCTCGAAGATGGAAGGACCCTGGCCGACTACAA 473065 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| ||||| || | || | || | |||||| |||| || Sbjct 473066 CATCCAAAAGGAGTCTACCCTTCACCTCGTCCTGAGGTTGAGAGGTGG 473113 >seq4073 Length=488838 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| ||||| || || || || || |||||||| || || || | || Sbjct 172999 ATGCAAATCTTCGTGAAAACACTGACCGGCAAGACCATCACTCTGGAGGTCGAGAGCTCG 172940 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | ||| || ||| ||||| |||||| | || || ||||| Sbjct 172939 GACACCATCGACAACGTCAAAGCGAAGATTCAGGACAAGGAAGGTATTCCTCCCGATCAG 172880 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || || ||||| || ||||| ||||| | || ||| | | ||||| ||| Sbjct 172879 CAGAGGTTGATCTTCGCCGGTAAGCAACTCGAAGATGGGCGAACTCTTGCAGATTATAAC 172820 Query 23791 ATACAAAAAGAGTCCAC 23807 || || ||||||||||| Sbjct 172819 ATTCAGAAAGAGTCCAC 172803 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||| | || ||||| || ||||| | || || || | | Sbjct 173683 ATGCAGATTTTCGTCAAGACCTTGACTGGAAAGACCATCACGTTGGAGGTCGAGAGCTCT 173624 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || |||||| ||||| || || | || || || || Sbjct 173623 GACACGATCGACAATGTGAAGGTCAAAATTCAGGACAAGGAGGGGATTCCTCCTGACCAG 173564 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||||||||| || || || || | |||||| | | ||||||||| Sbjct 173563 CAGAGGCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACTCTGGCGGATTACAAC 173504 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| || || || | ||||| ||||| ||| | ||||||| Sbjct 173503 ATCCAAAAGGAATCGACGCTTCATTTGGTTTTGAGGCTCAGAGGAGG 173457 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| ||||| | || || || || |||||||| || || || | || Sbjct 173227 ATGCAAATCTTCGTGAAAACATTGACCGGCAAGACCATCACTCTGGAGGTCGAGAGCTCG 173168 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | ||| || ||| ||||| |||||| | || || || || Sbjct 173167 GACACCATCGACAACGTCAAAGCGAAGATTCAGGACAAGGAAGGTATTCCTCCCGACCAG 173108 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || || ||||| || || || ||||| | || ||| | | ||||| ||| Sbjct 173107 CAGAGGTTGATCTTCGCCGGTAAGCAGCTCGAAGATGGGCGAACTCTGGCAGATTATAAC 173048 Query 23791 ATACAAAAAGAGTCCAC 23807 || || ||||||||||| Sbjct 173047 ATTCAGAAAGAGTCCAC 173031 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || || ||||| || || ||||| | || || || | | Sbjct 173911 ATGCAGATATTCGTGAAGACGCTGACGGGGAAGACCATCACGTTGGAGGTGGAGAGCTCC 173852 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | | ||| || ||| ||||| || || | || || || || Sbjct 173851 GATACGATCGATAATGTGAAAGTTAAGATTCAAGACAAGGAGGGGATCCCTCCTGACCAG 173792 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || ||||||||||| || || || || | |||||| | | ||||||||| Sbjct 173791 CAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACTCTGGCGGATTACAAC 173732 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || ||||| || | ||||| || || || || |||| || Sbjct 173731 ATCCAGAAGGAGTCGACTCTCCATTTGGTGTTGAGACTGAGAGGCGG 173685 >seq3072 Length=975934 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 ||||| || || | || |||||||| ||||| || || ||||| || || || |||| Sbjct 270996 GACAAGGAGGGAATTCCACCAGATCAGCAGCGATTGATTTTTGCTGGTAAGCAGTTGGAG 271055 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 |||| ||||| ||| ||| |||||||| |||||||||||||| | || | || || Sbjct 271056 GACGGCCGCACGCTAGCCGACTACAACATCCAAAAAGAGTCCACCCTCCACCTGGTGTTG 271115 Query 23824 AGGTTGCGAGGAGG 23837 || ||| | ||||| Sbjct 271116 AGATTGAGGGGAGG 271129 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| || ||| | || || || || || ||||| || ||||| | | Sbjct 271810 AATGCAGATTTTCGTGAAGACCTTGACTGGTAAGACCATTACTCTTGAGGTTGAGAGCTC 271869 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || ||| | || || | || || || ||| ||||| || || | || ||||| | Sbjct 271870 AGATACTATCGACAACGTGAAGAC-GAAGATTCAAGACAAGGAGGGAATCCCCCCAGACC 271928 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | || || ||||| || || ||||| || || | | | | | ||| ||||| | Sbjct 271929 AGCAGAGGTTGATTTTTGCAGGAAAGCAACTCGAGGATGGAAGAATTCTAGCGGATTATA 271988 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGT 23819 | || ||||| || ||||| || || || || Sbjct 271989 ATATCCAAAAGGAATCCACTTTGCACTTGGT 272019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337992557661596