Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_031080.1 Length=160985 Score E Sequences producing significant alignments: (Bits) Value seq1013 111 2e-19 >seq1013 Length=3715 Score = 111 bits (122), Expect = 2e-19 Identities = 115/149 (77%), Gaps = 4/149 (3%) Strand=Plus/Plus Query 120464 TGCGGGCCGGGCCGTGGATCCGCCGGAGGCTCGCTGGTCACCTACGTCATGGGCATCACC 120523 ||||| || |||||||| || || | |||||||||||| |||||||| ||||||||||| Sbjct 1207 TGCGGCCCCGGCCGTGGCTCGGCGGCGGGCTCGCTGGTCGCCTACGTCCTGGGCATCACC 1266 Query 120524 TCGATCGATCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGATC--GCC 120581 |||| |||||| | || | ||||| |||||||| ||| | |||||||| | | Sbjct 1267 GACCTCGACCCGATCCGGCACAAGCTGATCTTCGAGCGGTTCCTGAACCCGGACCGTGTG 1326 Query 120582 CCGACTTTCCCGACATCGACGTCGACTTC 120610 ||| | |||||||||||| | |||||| Sbjct 1327 TCGA--TGCCCGACATCGACATGGACTTC 1353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514997366821400