Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physcomitrella_20patens_20[refseq_20GCF_5F000002425.3_202007-12-14] 1,990 sequences; 477,947,608 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1917 95.1 1e-14 seq1943 93.3 4e-14 >seq1917 Length=1730829 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || || || || || | |||||| | || | || Sbjct 507902 ATGCAAATCTTTGTGAAGACGTTGACGGGGAAGACTATCACCTTGGAGGTGGAGAGCTCT 507961 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || || |||||| ||||| ||||| || ||||||||||| Sbjct 507962 GACACGATTGACAACGTTAAGACGAAGATTCAAGACAAGGAAGGCATTCCTCCCGATCAG 508021 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||||| || |||| || |||||||||| | || |||| | | | | | ||||| ||| Sbjct 508022 CAAAGGCTTATTTTCGCCGGCAAACAATTGGAGGATGGTCGCACCTTGGCAGACTACAAC 508081 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||||||||| || | ||| | ||||| Sbjct 508082 ATCCAAAAAGAATCAACCTTGCATTTAGTCCT 508113 >seq1943 Length=2190071 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || || || || || | ||||| | ||| | ||| Sbjct 1470072 ATGCAAATATTTGTTAAGACGTTGACGGGGAAGACTATCACATTAGAAGTGGAAAGTTCT 1470131 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || || |||||| ||||||||||| || || || ||||| Sbjct 1470132 GACACCATCGACAACGTGAAGACTAAGATTCAGGACAAAGAAGGAATTCCCCCGGATCAG 1470191 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 || ||||| || | | |||||| ||||| ||||||| | | || | || || || || Sbjct 1470192 CAGAGACTTATCTTTGCCGGCAAGCAACTGGAAGATGGTCG-TACTTTGGCTGATTACAA 1470250 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||| || || || || | || |||||||| | | |||||||| Sbjct 1470251 CATTCAGAAGGAGTCCACCCTGCACTTGGTCCTGCGCTTGAGAGGAGG 1470298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478650493272800