Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physcomitrella_20patens_20[refseq_20GCF_5F000002425.3_202007-12-14] 1,990 sequences; 477,947,608 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1691 194 1e-43 seq1898 150 1e-30 seq1892 107 2e-17 seq1943 98.7 8e-15 seq1639 91.5 1e-12 seq1740 89.7 4e-12 seq1538 89.7 4e-12 seq1917 86.0 5e-11 >seq1691 Length=539818 Score = 194 bits (214), Expect = 1e-43 Identities = 375/548 (68%), Gaps = 9/548 (2%) Strand=Plus/Plus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || || || ||||| ||||| || || ||||||||||| || |||||| ||| | || Sbjct 231780 ATCGGGATTGATTTGGGAACGACGTACAGTTGTGTTGGAGTGTGGCAACATGATCGGGTG 231839 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 || || ||||| ||||||||||| ||| | || || || || |||||| | || || || Sbjct 231840 GAGATCATTGCTAATGATCAAGGAAACCGCACCACACCGTCATATGTTGCGTTTACTGAC 231899 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174 || || | || |||| || ||||| || |||||| | || || || || ||||| Sbjct 231900 ACGGAGCGGTTGATTGGAGACGCAGCTAAGAATCAAGTCGCTATGAACCCGACGAATACC 231959 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 | || ||||| || || || ||||| || | || ||||| | |||| ||| ||| Sbjct 231960 GTGTTCGATGCGAAGCGGTTGATTGGGAGGCGATTCGATGATGTGTCTGTACAGAGTGAT 232019 Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGG---AAAACCTTATATTGAAGCT 550291 |||||| ||||| || || | || | | || || |||| || | | Sbjct 232020 ATGAAGTTGTGGCCGTTTAAAGTGATTGCCGGGCCAGGGAATAAGCCTTTCATAGTTGTG 232079 Query 550292 ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATG 550351 ||| | | ||| || |||||| | | ||| |||| ||||| ||||| || || Sbjct 232080 ACTTACAAGGGAGAGACGAAGCAATTTGCTGCTGAAGAAATCTCATCCATGGTGTTGATC 232139 Query 550352 AAAATGAAACAAACAGC--CAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATA 550408 || |||||| | || |||| || |||| |||| || | | |||| || || Sbjct 232140 AAGATGAAAGAGGTTGCAGAAGTG--TTCCTTGG-AAAGACTGTGAAGAATGCTGTCATC 232196 Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || ||||| ||||||||||| || || | ||||| || || ||||| || |||| Sbjct 232197 ACAGTGCCAGCCTATTTTAATGATTCTCAGAGGCAAGCAACGAAGGATGCAGGTGCTATT 232256 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| | || |||| || || ||||| || ||||| ||||||||| |||| ||||| Sbjct 232257 GCTGGTTTAAACGTTCAGCGCATCATCAACGAGCCTACGGCTGCTGCAATTGCTTATGGC 232316 Query 550529 CTTGATAA 550536 | ||||| Sbjct 232317 TTGGATAA 232324 Score = 170 bits (188), Expect = 2e-36 Identities = 530/806 (66%), Gaps = 22/806 (3%) Strand=Plus/Plus Query 551790 GGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTG 551847 |||||| | ||||||||||| ||||||||||| ||| | | || | || | |||| Sbjct 232440 GGAGATACACATCTTGGTGGTGAAGATTTTGACAATCGGATTGTGAACCAC--TTTGTTC 232497 Query 551848 AAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCGTC 551907 | || || || |||| |||| ||| | || ||||| |||||||||||| | Sbjct 232498 AGGAGTTCAAGAGAAAGTACAAGAAGGATATTACTGGTAATGCCAGAGCTCTTCGTCGCC 232557 Query 551908 TAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTG 551967 || | ||||| ||||||||| || | | | ||| | | | || ||||| |||| Sbjct 232558 TACGTACTGCCGCCGAAAGAGCGAAGAGGACGTTGTCAGCGACTGCACAGACCACCATTG 232617 Query 551968 AAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTG 552027 || | |||||||| | || || |||||| | | ||||| |||| || | ||| | Sbjct 232618 AAATTGATTCATTGTACGAAGGTGTTGATTTCTACTCCACTATTACGAGAGCAAGATTCG 232677 Query 552028 AAGATATTTGTTCTG-ATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGA 552086 | || ||| || |||| || | ||| || || || || || || | || | Sbjct 232678 AGGA-ATTGAACATGGATCTTTTCCGCAAATGTATGGAGCCTGTTGAGAAATGTCTACGG 232736 Query 552087 GATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGA 552146 || | ||||| || ||| |||| || || |||| |||||||| || || || || Sbjct 232737 GACGCCAAGATGGACAAAGGTCAAGTTCAGGAGGTTGTTCTTGTTGGCGGCTCCACCCGA 232796 Query 552147 ATTCCTAAAATTCGCGAAATGT--TA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAA 552203 ||||| || | || | | | || || || ||| | || | || || || | Sbjct 232797 ATTCCGAAGGT--GCAGAGTCTCCTACAGGATTTCTTTAACGGGAAGGAACTT---TGCA 232851 Query 552204 AGTG--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTT 552261 || | ||||||| |||||||| ||||| ||||| || ||| ||||||| || || ||| Sbjct 232852 AGAGCATTAATCCCGATGAGGCCGTTGCTTATGGAGCAGCAGTTCAAGCTGCAATCCTTA 232911 Query 552262 CTGGACAAACTGATGAAAAACTACAAAA--TATTGTACTTGTAGATGTTACTCCTCTATC 552319 || | | | |||| | ||| | ||||| ||| |||||||||||||| Sbjct 232912 GCGGCGAGGGTAGTCAAAAGGTTCAAGACCTATTGCTGTTG--GATGTTACTCCTCTTAG 232969 Query 552320 TCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTAT 552379 | | || | ||||| | ||| ||| ||||||| | ||||| || ||||| || || Sbjct 232970 TTTAGGACTCGAAACCGCTGGCGGTGTTATGACCACACTTATTCCAAGGAATACGACCAT 233029 Query 552380 TCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAAT 552439 ||| || || | | || || |||||||| || ||||| | | ||| || Sbjct 233030 TCCCACGAAGAAGGAGCAAATCTTCTCGACGTATTCCGACAATCAGCCAGGGGTTCTTAT 233089 Query 552440 TCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAA 552499 || | || ||||| || ||| | || | |||||||||| | | || | ||| | Sbjct 233090 CCAGGTATTCGAAGGCGAGAGAGCAAGAACAAGAGATAATAATTTATTGGGGAAGTTTGA 233149 Query 552500 TTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGT-TACTTTCGATA 552558 | || ||||| ||||||||||| || || ||||| ||| | || | |||| || | Sbjct 233150 GCTCACTGGAATTCCACCTGCTCCTCGAGGTGTGCCGCAGATTAACGTCTGCTTT-GACA 233208 Query 552559 TCGATGCCAATGGAATTTTGAATGTG 552584 ||||||| ||||| || |||| ||| Sbjct 233209 TCGATGCTAATGGTATACTGAACGTG 233234 >seq1898 Length=1509708 Score = 150 bits (166), Expect = 1e-30 Identities = 364/545 (67%), Gaps = 6/545 (1%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || || || | ||||| || ||||| || ||||| || ||||| ||| | Sbjct 688588 GCGATCGGAATTGACCTCGGAACGACGTATAGCTGCGTTGGAGTGTGGCAGCATGATCGG 688647 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || ||||||||||||||||| || ||| | || || || || |||||| | |||||| Sbjct 688648 GTGGAGATTATTGCCAATGATCAGGGGAACCGCACCACGCCGTCGTATGTTGCGTTCACG 688707 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || || |||| ||||| || || | |||| | || || ||| Sbjct 688708 GACACGGAGAGGTTGATTGGAGATGCGGCGAAGAACCAAGTGGCGATGAACCCGGTGAAT 688767 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || | |||||||| || || | |||||||| | || ||||| || |||||||| Sbjct 688768 ACCGTGTTTGATGCGAAGCGGCTGATTGGAAGGCGGTTCGATGATGCGTCTGTTCAGAGT 688827 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAA--AACCTTAT-ATTGAA 550288 |||||||| ||||| || | | || || | || | || | ||| |||| Sbjct 688828 GATATGAAATTGTGGCCGTTTAAGGTGATTGCTGGCCCCGGGAGTAAGCCTATCATTGTT 688887 Query 550289 GCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTA 550348 | | | | |||| || || ||| | | || | || || || ||||| || Sbjct 688888 GTGAATTACAAAGGGGAGACGAAGCAGTTTGCTGCGGAGGAGATCTCGTCCATGGTGTTG 688947 Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAAT 550407 || || |||||| | | || || ||| |||| |||| || | | |||| || || Sbjct 688948 ATTAAGATGAAAGAGATTGCGGAAGCGTTTCTTGG-AAAGACTGTGAAGAATGCTGTTAT 689006 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467 ||||| || |||||||| ||||| || || | || || || || ||||| || || Sbjct 689007 TACTGTGCCTGCATATTTCAATGATTCGCAGAGGCAGGCGACGAAGGATGCAGGTGCCAT 689066 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 ||| || | |||||||| || || || ||||| ||||| || ||||| |||| ||||| Sbjct 689067 TGCGGGTATCAATGTTCTGCGCATCATTAATGAGCCTACGGCAGCTGCTATTGCTTATGG 689126 Query 550528 ACTTG 550532 |||| Sbjct 689127 -CTTG 689130 Score = 131 bits (144), Expect = 1e-24 Identities = 522/809 (65%), Gaps = 16/809 (2%) Strand=Plus/Plus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTT 551846 ||||||| |||||||||||||||| || || || ||| | | || |||| | ||| Sbjct 689250 TGGAGATACTCATCTTGGTGGCGAGGACTTCGACAATCGGGTCGTGAATCAC--TTCGTT 689307 Query 551847 GAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCGT 551906 |||| ||||| | || |||| ||| | | ||| | ||||||||| || Sbjct 689308 CAAGAATTTAAGAGGAAGTACAAGAAGGATATTACGGGCAATGCTAGAGCTCTTCGCCGC 689367 Query 551907 CTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATT 551966 || | || || |||||||| || | | | ||| | | | || ||||| || Sbjct 689368 TTACGCACAGCCGCTGAAAGAGCGAAGAGGACATTGTCAGCGACTGCACAGACCACCATC 689427 Query 551967 GAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTT 552026 || | ||||| || | ||| || | |||| | | | || |||| || | || Sbjct 689428 GAGATTGATTCCTTGTATGATGGTGTGGATTTCTACTCTACCATCACGAGAGCAAGGTTC 689487 Query 552027 GAAGATATTTGTTCTG-ATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGT-TTTAA 552084 || || ||| | || | || || ||||| || ||||| || || |||| ||| Sbjct 689488 GAGGA-ATTGAATATGGACCTTTTCCGAAAATGTATGGAACCTGTTGAG-AAGTGTTTGC 689545 Query 552085 GAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAA 552144 | || | ||||| || || | || || || | ||||| |||||||| || || Sbjct 689546 GGGACGCGAAGATGGACAAGGGTCAGGTGCACGAGGTGGTGCTCGTTGGTGGCTCCACTC 689605 Query 552145 GAATTCCTAAAAT-TCGCGAAATGTT-AAGTTCTTATTTCAATGGTAAAAAATTAAATGA 552202 | |||||||| | | | | || ||| | | ||||| || || |||| || Sbjct 689606 GGATTCCTAAGGTGTTGAGCCTCCTTCAAGATTTC--TTCAACGGGAAGGAATTG--TGC 689661 Query 552203 AAGTG--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTT 552260 ||| | |||| || |||||||| ||||| ||||| || || ||||||| || ||||| Sbjct 689662 AAGAGCATTAACCCCGATGAGGCGGTTGCTTATGGGGCAGCGGTTCAAGCTGCAATTCTG 689721 Query 552261 TCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCT 552320 || | || |||| | ||| || | | || | |||||||||||||| Sbjct 689722 AGCGGTGAGGGGAATCAAAAGGTTCAAGATCTACTGCTGTTGGATGTTACTCCTCTTAGC 689781 Query 552321 CTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATT 552380 || ||| | ||||| | || ||| | ||||| | |||||| || || || || ||| Sbjct 689782 CTCGGTCTTGAAACCGCCGGTGGTGTCATGACAACTCTTATTCCAAGGAACACGACAATT 689841 Query 552381 CCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATT 552440 || || ||| | || || ||||| || | |||||||| | | |||| || Sbjct 689842 CCCACGAAGAAAGAGCAAGTGTTCTCTACCTACGCTGATAATCAGCCAGGTGTTCTTATC 689901 Query 552441 CAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAAT 552500 || | ||||| ||||| || | || | ||| || |||| | | || | ||| | Sbjct 689902 CAGGTCTTTGAGGGAGAGAGGGCAAGAACAAGAGACAACAATCTATTGGGGAAATTTGAG 689961 Query 552501 TTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATC 552560 | | || ||||| ||||||||||| || || ||||| ||| | ||| |||||||| Sbjct 689962 CTTGCTGGCATTCCACCTGCTCCTCGAGGTGTGCCGCAGATTAACGTTTGCTTCGATATT 690021 Query 552561 GATGCCAATGGAATTTTGAATGTGACTGC 552589 ||||| ||||| || | |||||| |||| Sbjct 690022 GATGCTAATGGTATCCTTAATGTGTCTGC 690050 >seq1892 Length=1436924 Score = 107 bits (118), Expect = 2e-17 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || | ||||| || || || || |||||||| || | ||||| ||||| |||| Sbjct 1327270 ATGCCGTGGTGACTGTGCCTGCTTACTTCAATGACTCGCAGAGACAAGCAACTAAGGATG 1327329 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | ||| ||||| || | || ||||||||||| |||||||| ||||| ||||||||| Sbjct 1327330 CCGGAGTCATTGCCGGTTTGAACGTTCTTCGTATCATCAATGAGCCTACCGCTGCTGCAA 1327389 Query 550518 TTGCATATGGACTTGATAA 550536 |||| || ||| | ||||| Sbjct 1327390 TTGCTTACGGATTGGATAA 1327408 >seq1943 Length=2190071 Score = 98.7 bits (108), Expect = 8e-15 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||| ||||||||||| | ||| | |||||| ||||| || |||||||| |||||||| Sbjct 1470254 AATGTTGTAATCAGCCAAAGTACGACCATCTTCCAGTTGCTTGCCGGCAAAGATAAGTCT 1470195 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTT 563390 |||||||| || |||||||||||||| || ||||| || Sbjct 1470194 CTGCTGATCCGGGGGAATTCCTTCTTTGTCCTGAATCTT 1470156 Score = 96.9 bits (106), Expect = 3e-14 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||| |||||||| || ||||| | ||| || | || |||||||||||||| | || Sbjct 1470026 AATGTTGTAATCGGCCAGAGTACGCCCATCCTCCAACTGCTTTCCGGCAAAAATCAATCG 1469967 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||| ||||| ||||| |||||||| |||||||| || || || ||||| || Sbjct 1469966 TTGCTGGTCAGGTGGAATACCTTCTTTGTCTTGAATCTTCGTCTTAACGTTATCAATAGT 1469907 Query 563412 ATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 ||| | | | ||| | |||| || || || || || ||||| ||||| ||||| Sbjct 1469906 ATCTGAGCTCTCAACTTCCAACGTAATCGTCTTCCCCGTCAGCGTTTTGACGAATATTTG 1469847 Query 563472 CAT 563474 ||| Sbjct 1469846 CAT 1469844 Score = 91.5 bits (100), Expect = 1e-12 Identities = 154/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 ||| ||||| || ||||| || | |||| || || |||||||||||| || ||||| Sbjct 1470749 CCTTAGACGAAGAACAAGGTGCAAGGTAGACTCCTTTTGAATATTGTAATCGGCCAGAGT 1470690 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 | || || | || || || || ||||| || | ||||| |||||||| || || Sbjct 1470689 ACGACCGTCCTCTAACTGCTTCCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGGATACC 1470630 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAG 563432 ||||||||| || ||||| || || || || ||||||| | | || || Sbjct 1470629 TTCTTTATCCTGGATTTTGGTCTTCACGTTGTCTATGGTATCAGAGCTCTCAACCTCTAG 1470570 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| || || ||||| | ||| || || ||||| |||||| Sbjct 1470569 AGTAATTGTCTTGCCAGTCAAAGTCTTCACAAAAATCTGCATA 1470527 >seq1639 Length=407714 Score = 91.5 bits (100), Expect = 1e-12 Identities = 140/194 (72%), Gaps = 8/194 (4%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| || || || || || || || || ||||| || || || ||||| ||| | Sbjct 142894 GCTATCGGCATTGACTTGGGCACTACCTACAGTTGCGTGGGAGTATGGCAGCATGATCGC 142953 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||| ||||||||||| || || |||||||| ||||| || ||||||| | |||||| Sbjct 142954 GTTGAGATTATTGCCAACGACCAGGGTAACAGGACTACCCCGAGTTATGTTGCATTCACG 143013 Query 550112 GAAACTGAAC-ATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTAC 550167 || || || | | ||| | || ||||| || || |||| |||| || ||||| || Sbjct 143014 GATACCGAGCGACTTA-TCGGAGATGCCGCCAAGAATCAGGTGGCCA-TG--AATCCCAC 143069 Query 550168 CAATACTATTTTTG 550181 ||| || | |||| Sbjct 143070 CAACACCGTCTTTG 143083 >seq1740 Length=701575 Score = 89.7 bits (98), Expect = 4e-12 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 394007 GTCACAATTTCATCAAATGTTAAATTCATTGCAATAATTTGTGGTAGTCCCACTTCATTA 394066 || ||| |||| | |||||||||| | || ||| | |||| ||| | ||||| | Sbjct 354755 GTTACAGTTTCTGGATATGTTAAATTTAGAGCGATACTCCAAGGTACTCCTAATTCATCA 354696 Query 394067 AGAGCAATATTTGGATCCGAGGTAATAACTGTACGACCTGACATATCCACACGTTTTCCC 394126 | | ||||| ||||| | ||| || || ||||| | || | ||||||||||||||| Sbjct 354695 ATATTTATATTAGGATCTGGGGTGATCACGGTACGTGCAGAAAAGTCCACACGTTTTCCC 354636 Query 394127 ATAAGATTTCCACGAATTCTACCTTCTTT 394155 || | |||||||||||| | ||| ||||| Sbjct 354635 ATCAAATTTCCACGAATACGACCCTCTTT 354607 >seq1538 Length=191664 Score = 89.7 bits (98), Expect = 4e-12 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 394007 GTCACAATTTCATCAAATGTTAAATTCATTGCAATAATTTGTGGTAGTCCCACTTCATTA 394066 |||||| |||| | | |||||||| | |||||| | || | ||| | ||||| | Sbjct 168878 GTCACAGTTTCCGGATAAGTTAAATTGAGGGCAATACTCCAAGGCACTCCTAATTCATCA 168819 Query 394067 AGAGCAATATTTGGATCCGAGGTAATAACTGTACGACCTGACATATCCACACGTTTTCCC 394126 | | |||||| ||||| | || || || ||||| | || | |||||||||||||||| Sbjct 168818 ATATTAATATTCGGATCTGGCGTGATCACAGTACGTGCAGAAAAATCCACACGTTTTCCC 168759 Query 394127 ATAAGATTTCCACGAATTCTACCTTCTTT 394155 || | |||||| || |||| ||| ||||| Sbjct 168758 ATCAAATTTCCTCGGATTCGACCCTCTTT 168730 >seq1917 Length=1730829 Score = 86.0 bits (94), Expect = 5e-11 Identities = 135/190 (71%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| |||||||||||||| || || | |||||| | ||| || || ||||| || Sbjct 508316 TTTGG--ATATTGTAATCAGCAAGGGTGCGGCCATCTTCTAATTGCTTACCAGCAAAGAT 508259 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 | | |||||||| || ||||| ||||| || ||||| ||||| || || || Sbjct 508258 CAAACGCTGCTGATCGGGCGGAATCCCTTCCTTGTCTTGGATTTTCGTCTTCACGTTGTC 508199 Query 563406 AATTGTATCAGTG-TGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 |||||| |||| | | || || || || | |||||||| || | |||||||| | Sbjct 508198 AATTGTGTCAGAGCTTTCGAC-CTCAAGCGTGATTGTTTTACCGGTCAAGGTTTTAACAA 508140 Query 563465 AAATTTGCAT 563474 | |||||||| Sbjct 508139 AGATTTGCAT 508130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029190759825100