Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physcomitrella_20patens_20[refseq_20GCF_5F000002425.3_202007-12-14] 1,990 sequences; 477,947,608 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1794 131 9e-26 >seq1794 Length=856596 Score = 131 bits (144), Expect = 9e-26 Identities = 234/339 (69%), Gaps = 2/339 (1%) Strand=Plus/Minus Query 25943 TCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTC 26002 ||||||||||||| |||| |||| ||||| || || |||| || || || |||||| Sbjct 303882 TCTGGAATCCACAGACCATAGAATAGATCTCGAGCCCTATTTTCCTCCTTCCCATGATTC 303823 Query 26003 TTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA 26062 || | ||||| | |||| || ||||| | ||||| || || | ||||||||| ||| Sbjct 303822 TTCCTAAGATCCAGCCAATCGAATATATCGGCATGCCACGGCTCCAGATAGATAGCGAAA 303763 Query 26063 CTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTC 26122 || || || || || ||||| || || ||||| | || || |||||||| || || Sbjct 303762 GCGCCCTTCCTCTTGCCGCCACCCTGGTCGACGTACCGAGCTGTGTCATTGAATACCCTC 303703 Query 26123 AACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGAT 26182 ||||| || | | ||| | ||| |||||||||| | |||| | | || || | Sbjct 303702 AACATCGGGATGATCCCATTAGAAGTCCCGTTTGTGCCACGAATGTAGCTGCCAGTAGCA 303643 Query 26183 CTAATATCGTGAGCATGA-ATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC 26241 | |||| ||| | ||| | ||| ||||||||||| | || |||| | ||||| || Sbjct 303642 CGGATATTATGAAC-TGACAAACCAATTCCACCAGCTGACTTGCTAATAACAGCACACTC 303584 Query 26242 TGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTT 26280 | || ||| | || || | ||||| || ||||| Sbjct 303583 CTTCAGAGTGTCGTAGATACCCTCAATGCTGTCGCCTTT 303545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253033862989250