Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physcomitrella_20patens_20[refseq_20GCF_5F000002425.3_202007-12-14] 1,990 sequences; 477,947,608 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq1917 95.1 1e-14 >seq1917 Length=1730829 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || ||||| || ||||| || ||| |||| || | Sbjct 507902 ATGCAAATCTTTGTGAAGACGTTGACGGGGAAGACTATCACCTTGGAGGTGGAGAGCTCT 507961 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | | || || || ||| ||||| |||||| | || ||||| Sbjct 507962 GACACGATTGACAACGTTAAGACGAAGATTCAAGACAAGGAAGGCATTCCTCCCGATCAG 508021 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||||||||||| || ||||||||||| || ||| | || ||| || |||||| Sbjct 508022 CAAAGGCTTATTTTCGCCGGCAAACAATTGGAGGATGGTCGCACCTTGGCAGACTACAAC 508081 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||||||||| || | |||||||| | | || ||||| || Sbjct 508082 ATCCAAAAAGAATCAACCTTGCATTTAGTCCTACGATTGCGAGGTGG 508128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402319842249920