Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq44759 95.1 1e-14 >seq44759 Length=4973 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/207 (71%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| ||||| ||||| || ||| || || || ||||| | ||| |||||| Sbjct 4412 GTCGACTCCTTTTGGATGTTGTAGTCGGCCAGCGTCCTACCATCTTCCAACTGCTTACCA 4353 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| ||||| ||||| || || || ||||| || ||||| ||| || || Sbjct 4352 GCGAAGATGAGACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 4293 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| | | ||||||||||| ||| | || |||||||| | ||| Sbjct 4292 ACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTTTTGCCGGTGAGCGTC 4233 Query 139748 TTTACGAATATTTGCATAGCTTATGTT 139774 || ||||| || ||||| | | ||||| Sbjct 4232 TTCACGAAGATCTGCAT-GTTGATGTT 4207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495407248468800