Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq76306 95.1 2e-14 >seq76306 Length=4672 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 125418 GCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCG 125477 ||||| || || | || || || ||| |||||||| ||||| || || || ||| Sbjct 1049 GCCGAAAGGCTCCTAGCCTTTGCGTGCGTTGAGGGCATATTCTTCTCTGGAAGCTTTTGT 990 Query 125478 GCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTT 125537 ||||| || |||||||||||||| || |||||||| || || | | |||||| | Sbjct 989 GCCATTTTCTGGCTCAAGAAGCGAGGCCTCATGCCTGGTCTAAGCTTCTCGAACGAGCTC 930 Query 125538 ATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 || ||||| |||||||| || ||||| ||||| || Sbjct 929 ATCTCTCGGGACGAGGGGCTCCACTGCGACTTCGC 895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740078093198640