Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq102373 82.4 6e-11 >seq102373 Length=7923 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891 ||||| || | ||| |||||||| || || ||||| || || | ||| | ||||| Sbjct 7716 CACCAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGTCCATCCTC 7775 Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951 |||||| || ||||| | || | ||||||||||||| || | |||||| ||||| Sbjct 7776 CAGCTGCTTGCCCGCGAAGATCAATCTCTGCTGATCCGGAGGAATGCCCTCCTTGTCTTG 7835 Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011 || || || || | | | | ||||| || ||| || | ||||||||| || Sbjct 7836 GATCTTAGCCTTGACGTTGTCAATGGTATCCGAAGACTCAACCTCTAGGGTAATGGTCTT 7895 Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGC 19039 ||| || | ||| || || || |||||| Sbjct 7896 ACCCGTGAGAGTCTTCACGAAGATTTGC 7923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414037658288116