Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq44759 89.7 5e-13 >seq44759 Length=4973 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| ||||||| || | ||||| | ||| | || | Sbjct 4672 ATGCAAATCTTCGTCAAAACCCTAACTGGGAAGACCATCACGTTGGAAGTTGAGAGTTCC 4731 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | ||||| ||||| ||||| ||||| || || || ||||| Sbjct 4732 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCACCTGATCAG 4791 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | ||||| | || ||| || || || || |||| ||| | | |||||| ||| Sbjct 4792 CAGCGTCTCATCTTCGCCGGTAAGCAGCTGGAGGATGGCCGAACCCTAGCCGACTACAAC 4851 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || ||||| || | ||||||||||| Sbjct 4852 ATTCAGAAGGAATCAACGTTGCATCTGGTCCT 4883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478028686882080