Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq52821 86.0 1e-11 >seq52821 Length=936 Score = 86.0 bits (94), Expect = 1e-11 Identities = 72/87 (83%), Gaps = 5/87 (6%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCACAT 142570 ||||||||| |||||||||| || ||||||| || |||||||||||||||||||||| Sbjct 208 TAGCTCAGTTGGTAGAGCGCGAGGCTCTTAACCTCGTGGTCGTGGGTTCGAGCCCCA--- 152 Query 142571 CGGGCAGAAGTCGCCGTCTT--TTGAT 142595 ||||| | ||| |||||| ||||| Sbjct 151 CGGGCGGCGGTCTGCGTCTTGATTGAT 125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1026442001693674