Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq76306 98.7 2e-15 >seq76306 Length=4672 Score = 98.7 bits (108), Expect = 2e-15 Identities = 118/158 (75%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 42698 CGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTC 42757 ||| ||||| |||||||| | ||| |||||||| |||||||| || ||| | Sbjct 1047 CGAAAGGCTCCTAGCCTTTGCGTGCGTTGAGGGCATATTCTTCTCTGGAAGCTTTTGTGC 988 Query 42758 CATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCA 42816 ||| |||||||||||| || ||| || ||||| || || | |||||||||||| |||| Sbjct 987 CATTTTCTGGCTCAAGAAGCGAGGCCTC-ATGCCTGGTCTAAGCTTCTCGAACGAGCTCA 929 Query 42817 TCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGC 42854 || ||||||||||||| || | ||||| || ||| Sbjct 928 TCTCTCGGGACGAGGGGCTCCACTGCGACTTCGCGTGC 891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943088965724640