Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq52188 86.0 7e-12 >seq52188 Length=8849 Score = 86.0 bits (94), Expect = 7e-12 Identities = 215/322 (67%), Gaps = 16/322 (5%) Strand=Plus/Plus Query 10877 AAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATT--CGCGG 10934 || ||||||||||| || | || || ||||| || || |||||||| ||||| | | | Sbjct 3498 AATCCATCCATCTCCGTGAGCAGCTGGTTGATCGTCTGCTCGCGTTCGTCATTTCCACCG 3557 Query 10935 GCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATAC 10994 || ||| || | | ||| | || || || || || ||||| |||||||| || | Sbjct 3558 CCAAG--ACCAGCGCCTCTCTGCCTCCCCACAGCATCGATCTCATCTATGAAAACAATGC 3615 Query 10995 ACGG-----TTGATTTTCACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGAC 11049 | || ||||||| ||| || || | || ||||| | |||||||| Sbjct 3616 AGGGAGCCTTTGATTT-----GGCCTTCTCGAACAGGTCCCGGACCCGAGAAGCACCGAC 3670 Query 11050 ACCCACAAACATTTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTGGATTC 11109 ||| || |||| || || || | || || | ||| || ||| |||||| || ||| Sbjct 3671 ACCGACGAACAGCTCGACGAACTCGGACGCCGCACACGAGAAGAACGGGACGCCGGCTTC 3730 Query 11110 ACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGC 11169 ||| || | ||||| || || | |||||||| || || || || |||| | ||| Sbjct 3731 ACCGGCTACTGCTCGAGCCAGCAACGTCTTCCCAGTTCCTGGAGGACCAACGAGCA-GGC 3789 Query 11170 ACCACGTGGG-ATCCTGGCACC 11190 | | | |||| ||| ||||||| Sbjct 3790 AACCCTTGGGAATCTTGGCACC 3811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596562748635120