Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq87603 149 6e-31 seq50088 149 6e-31 seq102373 136 4e-27 seq44759 132 5e-26 seq85017 131 2e-25 seq59239 131 2e-25 seq50989 131 2e-25 seq1166 107 2e-18 seq17630 96.9 3e-15 seq103297 95.1 1e-14 >seq87603 Length=1014 Score = 149 bits (164), Expect = 6e-31 Identities = 164/216 (76%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||||||||||||| | ||| ||||| || ||||| ||||| ||| | | || || | Sbjct 736 CGCAACACCAAATGGAGCGTCGACTCCTTCTGAATGTTGTAGTCGGCTAGGGTTCGCCCA 795 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || || |||||||||||||||| ||||| || |||||||||||| Sbjct 796 TCCTCGAGCTGCTTCCCGGCAAAGATCAATCGCTGCTGGTCGGGCGGAATGCCCTCCTTG 855 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || ||||| |||| |||| ||||| | | ||| || || | ||| | Sbjct 856 TCCTGGATCTTGGCCTTGACGTTG-TCGATCGTGTCAGAAGACTCAACCTCCAAGGTGAT 914 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| ||||| || || ||||| || || |||||||| Sbjct 915 CGTCTTGCCAGTTAGGGTTTTCACGAAGATCTGCAT 950 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | || | ||||| ||| | || ||||| || ||||| ||||| || || Sbjct 496 CCTCCGCGAAGGCGGAGCACCAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCCGCC 555 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| || ||||| ||||||| |||||||| || ||||| Sbjct 556 AAGGTACGACCATCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGAGGA 615 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| || ||||| | || | ||| || | | ||| || Sbjct 616 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCAATGGTATCAGAAGACTCAACC 675 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | || ||||| || || || || || |||||||||||| Sbjct 676 TCTAGGGTGATTGTCTTGCCCGTGAGCGTCTTGACGAAAATCTGCATG 723 >seq50088 Length=882 Score = 149 bits (164), Expect = 6e-31 Identities = 164/216 (76%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||||||||||||| | ||| ||||| || ||||| ||||| ||| | | || || | Sbjct 604 CGCAACACCAAATGGAGCGTCGACTCCTTCTGAATGTTGTAGTCGGCTAGGGTTCGCCCA 663 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || || |||||||||||||||| ||||| || |||||||||||| Sbjct 664 TCCTCGAGCTGCTTCCCGGCAAAGATCAATCGCTGCTGGTCGGGCGGAATGCCCTCCTTG 723 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || ||||| |||| |||| ||||| | | ||| || || | ||| | Sbjct 724 TCCTGGATCTTGGCCTTGACGTTG-TCGATCGTGTCAGAAGACTCAACCTCCAAGGTGAT 782 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| ||||| || || ||||| || || |||||||| Sbjct 783 CGTCTTGCCAGTTAGGGTTTTCACGAAGATCTGCAT 818 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | || | ||||| ||| | || ||||| || ||||| ||||| || || Sbjct 364 CCTCCGCGAAGGCGGAGCACCAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCCGCC 423 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| || ||||| ||||||| |||||||| || ||||| Sbjct 424 AAGGTACGACCATCCTCGAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGAGGA 483 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| || ||||| | || | ||| || | | ||| || Sbjct 484 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCAATGGTATCAGAAGACTCAACC 543 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | || ||||| || || || || || |||||||||||| Sbjct 544 TCTAGGGTGATTGTCTTGCCCGTGAGCGTCTTGACGAAAATCTGCATG 591 >seq102373 Length=7923 Score = 136 bits (150), Expect = 4e-27 Identities = 159/212 (75%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| ||| | || ||||| || ||||| ||||| || | | || ||| ||| || Sbjct 7488 CACCAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCCGCTAAGGTACGACCATCCTC 7547 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 | ||| || || || ||||||| ||||||||||| ||||| ||||||||||||||| Sbjct 7548 CAACTGCTTCCCGGCAAAGATCAAACGCTGCTGATCCGGAGGAATGCCCTCCTTGTCCTG 7607 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||| || ||||| |||| |||| ||| |||| ||||||||| || | ||| | || | Sbjct 7608 GATCTTGGCCTTGACGTTG-TCGATGGTATCCGAACTCTCGACCTCTAGGGTGATGGTCT 7666 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 | || || || ||||| || || ||||||||| Sbjct 7667 TACCCGTTAGGGTTTTCACGAAGATCTGCATG 7698 Score = 113 bits (124), Expect = 4e-20 Identities = 152/209 (73%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| ||| | ||| ||||| || || || ||||| ||| | | || || ||| || Sbjct 7716 CACCAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGTCCATCCTC 7775 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || || ||| ||||||||| ||||||||| ||||| |||||||||||||| Sbjct 7776 CAGCTGCTTGCCCGCGAAGATCAATCTCTGCTGATCCGGAGGAATGCCCTCCTTGTCTTG 7835 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||| || ||||| |||| || | ||| |||| | ||| || || | ||| | || | Sbjct 7836 GATCTTAGCCTTGACGTTG-TCAATGGTATCCGAAGACTCAACCTCTAGGGTAATGGTCT 7894 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGC 127111 | || || ||||| || || || || ||| Sbjct 7895 TACCCGTGAGAGTCTTCACGAAGATTTGC 7923 >seq44759 Length=4973 Score = 132 bits (146), Expect = 5e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | |||||||| || || || ||||| ||| | Sbjct 4670 CCACCACGCAGACGAAGCACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCT 4611 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || ||||| ||||||| |||||||| ||||| ||| Sbjct 4610 AGGGTTCGGCCATCCTCGAGCTGCTTACCAGCAAAGATCAACCGCTGCTGGTCGGGGGGT 4551 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||||| | |||| ||||| | |||||||| Sbjct 4550 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTATCGATCGTGTCGGAGCTCTCGACC 4491 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 |||| ||| | || ||||| || || || || || || ||||||||| || Sbjct 4490 TCGAGGGTGATGGTCTTGCCAGTTAGGGTCTTGACGAAGATCTGCATGCCT 4440 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| ||||| || ||||| ||| ||| ||| | | ||| || | ||| || ||| Sbjct 4412 GTCGACTCCTTTTGGATGTTGTAGTCGGCCAGCGTCCTACCATCTTCCAACTGCTTACCA 4353 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 4352 GCGAAGATGAGACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 4293 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| ||| |||||||| | ||| || || | ||| | ||||||||||| || || Sbjct 4292 ACGTTGT-CGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTTTTGCCGGTGAGCGT 4234 Query 127096 TTTTACAAAAATCTGCATG 127114 || || || ||||||||| Sbjct 4233 CTTCACGAAGATCTGCATG 4215 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||| ||| | ||| || || || ||||| ||||| ||| | | || || ||| || Sbjct 4880 ACCAGATGCAACGTTGATTCCTTCTGAATGTTGTAGTCGGCTAGGGTTCGGCCATCCTCC 4821 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| || || ||| |||| | ||||||||||| || || || || ||||||||| | Sbjct 4820 AGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCAGGTGGGATACCTTCCTTGTCCTGG 4761 Query 127025 ATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || || ||||| |||| || | |||||| | |||||| ||||| | || | || || Sbjct 4760 ATCTTGGCCTTGACGTTG-TCAATGGTGTCGGAACTCTCAACTTCCAACGTGATGGTCTT 4702 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || || || ||||| || || || |||||| Sbjct 4701 CCCAGTTAGGGTTTTGACGAAGATTTGCATG 4671 >seq85017 Length=850 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||||||| | ||||||||| || || || ||||| ||| ||| ||| | | | Sbjct 455 CGCAGTACCAAATGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTCCTACCA 514 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || |||||| ||||||| |||||||| || || || || ||||||||| Sbjct 515 TCCTCAAGCTGCTTACCAGCGAAGATCAACCGCTGCTGGTCTGGCGGGATACCCTCCTTG 574 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| || || ||||| |||| |||| ||| || | | |||||| || | ||| | Sbjct 575 TCCTGAATCTTAGCCTTGACGTTG-TCGATGGTATCGGAAGACTCGACCTCTAGGGTAAT 633 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || || || || || |||||||| Sbjct 634 GGTCTTACCCGTTAGGGTCTTGACGAAGATCTGCAT 669 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | |||| ||| | |||||||| || || || ||||| ||| | Sbjct 214 TCCACCACGCAGACGGAGAACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGC 273 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | ||||| ||| || ||||| || || ||| |||| | |||||||| || ||||| Sbjct 274 AAGGGTGCGGCCATCCTCCAGCTGCTTCCCTGCGAAGATGAGACGCTGCTGGTCAGGAGG 333 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || || ||||||||| ||| || ||| | ||||| | | || || | |||||| | Sbjct 334 AATTCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGT-CAATAGTATCGGAACTCTCAA 392 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | ||| | || || || || ||||| || || ||||||||||| Sbjct 393 CCTCCAAGGTGATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 441 Score = 89.7 bits (98), Expect = 5e-13 Identities = 122/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||| || | ||| ||||| || ||||| ||||| ||| | | || || | Sbjct 683 CGCAGTACCAGGTGCAACGTCGACTCCTTCTGAATGTTGTAGTCGGCTAGGGTACGGCCA 742 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || |||||| |||| | |||||||| || || || || ||||||||| Sbjct 743 TCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGGATACCCTCCTTG 802 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||| ||| || ||||| |||| || | |||||| | | |||||| Sbjct 803 TCCTGGATCTTGGCCTTGACGTTG-TCAATGGTGTCAGAAGACTCGAC 849 >seq59239 Length=983 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||||||| | ||||||||| || || || ||||| ||| ||| ||| | | | Sbjct 588 CGCAGTACCAAATGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTCCTACCA 647 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || |||||| ||||||| |||||||| || || || || ||||||||| Sbjct 648 TCCTCAAGCTGCTTACCAGCGAAGATCAACCGCTGCTGGTCTGGCGGGATACCCTCCTTG 707 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| || || ||||| |||| |||| ||| || | | |||||| || | ||| | Sbjct 708 TCCTGAATCTTAGCCTTGACGTTG-TCGATGGTATCGGAAGACTCGACCTCTAGGGTAAT 766 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || || || || || |||||||| Sbjct 767 GGTCTTACCCGTTAGGGTCTTGACGAAGATCTGCAT 802 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | |||| ||| | |||||||| || || || ||||| ||| | Sbjct 347 TCCACCACGCAGACGGAGAACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGC 406 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | ||||| ||| || ||||| || || ||| |||| | |||||||| || ||||| Sbjct 407 AAGGGTGCGGCCATCCTCCAGCTGCTTCCCTGCGAAGATGAGACGCTGCTGGTCAGGAGG 466 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || || ||||||||| ||| || ||| | ||||| | | || || | |||||| | Sbjct 467 AATTCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGT-CAATAGTATCGGAACTCTCAA 525 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | ||| | || || || || ||||| || || ||||||||||| Sbjct 526 CCTCCAAGGTGATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 574 Score = 89.7 bits (98), Expect = 5e-13 Identities = 122/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||| || | ||| ||||| || ||||| ||||| ||| | | || || | Sbjct 816 CGCAGTACCAGGTGCAACGTCGACTCCTTCTGAATGTTGTAGTCGGCTAGGGTACGGCCA 875 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || |||||| |||| | |||||||| || || || || ||||||||| Sbjct 876 TCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGGATACCCTCCTTG 935 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||| ||| || ||||| |||| || | |||||| | | |||||| Sbjct 936 TCCTGGATCTTGGCCTTGACGTTG-TCAATGGTGTCAGAAGACTCGAC 982 >seq50989 Length=854 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||||||| | ||||||||| || || || ||||| ||| ||| ||| | | | Sbjct 259 CGCAGTACCAAATGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTCCTACCA 318 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || |||||| ||||||| |||||||| || || || || ||||||||| Sbjct 319 TCCTCAAGCTGCTTACCAGCGAAGATCAACCGCTGCTGGTCTGGCGGGATACCCTCCTTG 378 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| || || ||||| |||| |||| ||| || | | |||||| || | ||| | Sbjct 379 TCCTGAATCTTAGCCTTGACGTTG-TCGATGGTATCGGAAGACTCGACCTCTAGGGTAAT 437 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || || || || || |||||||| Sbjct 438 GGTCTTACCCGTTAGGGTCTTGACGAAGATCTGCAT 473 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||| || | ||| ||||| || ||||| ||||| ||| | | || || | Sbjct 487 CGCAGTACCAGGTGCAACGTCGACTCCTTCTGAATGTTGTAGTCGGCTAGGGTACGGCCA 546 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || |||||| |||| | |||||||| || || || || ||||||||| Sbjct 547 TCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGGATACCCTCCTTG 606 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || ||||| |||| || | |||||| | | |||||| || | ||| | Sbjct 607 TCCTGGATCTTGGCCTTGACGTTG-TCAATGGTGTCAGAAGACTCGACCTCAAGGGTGAT 665 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || || ||||| || ||||| || || ||||||||| Sbjct 666 GGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCATG 702 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | |||| ||| | |||||||| || || || ||||| ||| | Sbjct 18 TCCACCACGCAGACGGAGAACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGC 77 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | ||||| ||| || ||||| || || ||| |||| | |||||||| || ||||| Sbjct 78 AAGGGTGCGGCCATCCTCCAGCTGCTTCCCTGCGAAGATGAGACGCTGCTGGTCAGGAGG 137 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || || ||||||||| ||| || ||| | ||||| | | || || | |||||| | Sbjct 138 AATTCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGT-CAATAGTATCGGAACTCTCAA 196 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | ||| | || || || || ||||| || || ||||||||||| Sbjct 197 CCTCCAAGGTGATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 245 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | ||| ||||| || ||||| ||||| ||| || Sbjct 703 CCACCACGCAGACGAAGCACCAGGTGCAACGTCGACTCCTTCTGAATGTTGTAGTCGGCC 762 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| | | ||| || | ||| || |||||| |||| | || |||||||| || || Sbjct 763 AACGTCCTACCATCCTCCAACTGCTTACCAGCGAAGATGAGACGTTGCTGATCCGGGGGG 822 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA 127037 || |||||||||||| ||| || ||||| Sbjct 823 ATACCCTCCTTGTCCTGGATCTTGGCCTTGA 853 >seq1166 Length=240 Score = 107 bits (118), Expect = 2e-18 Identities = 124/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | |||||||||| ||| | ||| ||||| || || || |||||||| || Sbjct 61 CCTCCGCGAAGGCGCAACACCAGATGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCC 120 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| | || || | || || |||||| |||||||||||||||||||||| || Sbjct 121 AACGTCCTCCCTTCCTCCAATTGCTTACCAGCGAAGATCAATCGCTGCTGATCGGGCGGG 180 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTC 127053 ||||||||||| ||| ||| || ||||| | |||| ||||| Sbjct 181 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACATTGTCGATCGTGTC 227 >seq17630 Length=252 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | ||||||||||| ||| | || || || || || || |||||||| || Sbjct 143 CCTCCGCGAAGTCGCAACACCAGATGGAGTGTGGATTCCTTCTGGATGTTGTAATCCGCC 84 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| | || || | || || |||||| ||||||||||||||||||| || || Sbjct 83 AACGTCCTCCCGTCCTCCAATTGCTTACCAGCGAAGATCAATCGCTGCTGATCCGGTGGG 24 Query 127007 ATGCCCTCCTTGTCCGTGATTTT 127029 ||||||||||| ||| ||| || Sbjct 23 ATGCCCTCCTTATCCTGGATCTT 1 >seq103297 Length=6425 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || || || ||||| ||| || Sbjct 4654 CCACCACGGAGGCGGAGCACCAGGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGCC 4713 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || |||||| |||| | | |||||| |||||||| Sbjct 4714 AGGGTGCGCCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCGGGAGGG 4773 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || ||| | | |||| ||| |||| || || Sbjct 4774 ATGCCCTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATGGTATCCGAGGATTCAACC 4833 Query 127067 TCGACGGTCACCGTTTTGCCGGTCA 127091 |||| ||| | ||||| || |||| Sbjct 4834 TCGAGGGTGATGGTTTTCCCCGTCA 4858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474871272603360