Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq76306 116 6e-21 >seq76306 Length=4672 Score = 116 bits (128), Expect = 6e-21 Identities = 125/163 (77%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 159922 GCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAG 159981 |||||| ||||||||||| || ||||||||||||||||||| |||||| || | | | || Sbjct 891 GCACGCGAAGTCGCAGTGGAGCCCCTCGTCCCGAGAGATGAGCTCGTTCGAGAAGCTTAG 950 Query 159982 GCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGC-ACCGCTAAAAA 160040 || ||||||| || ||| |||||||| ||||||| | ||||||| || || | Sbjct 951 ACCAGGCATGAGGCCTCGCTTCTTGAGCCAGAAAATGG-CACAAAAGCTTCCAGAGAAGA 1009 Query 160041 AGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAA 160083 | || ||||| ||| |||||| || | |||||| || |||| Sbjct 1010 ATATGCCCTCAACGCACGCAAAGGCTAGGAGCCTTTCGGCAAA 1052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794102474151840