Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq102373 87.8 1e-12 >seq102373 Length=7923 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| || || | || || |||| ||| | |||| || || || || || || || || Sbjct 7470 GCCTCCACGAAGGCGAAGCACCAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCCGC 7529 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 || || |||| ||||| || |||||| |||| || |||||||||||||||| || Sbjct 7530 TAAGGTACGACCATCCTCCAACTGCTTCCCGGCAAAGATCAAACGCTGCTGATCCGGAGG 7589 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCG-CTACTGTGTCTGCGCTTTCCA 39670 | ||| || ||||| || || || | ||| | | | || || | || || | Sbjct 7590 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTATCCGAACTCTCGA 7648 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 | || | || || || |||||||||| ||||| ||||||||||||||| Sbjct 7649 CCTCTAGGGTGATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATG 7698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346921205984762