Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= NC_019444.1 Length=176043 Score E Sequences producing significant alignments: (Bits) Value seq95781 84.2 2e-11 >seq95781 Length=6618 Score = 84.2 bits (92), Expect = 2e-11 Identities = 128/180 (71%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 164063 TACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAATTACTCTTGTCGTGCTGGT 164122 |||||||| ||||| ||||| | || || | || || ||||| || ||||| ||| Sbjct 3767 TACATTCTGGACGCCGCAGAGGCGGCGGGCATCGACGTTCCATACTCGTGCCGTGCCGGT 3708 Query 164123 GCTTGCTCCTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATCAGTCA 164182 || |||| | | || | || ||||| || ||||||||||| ||||| ||| || Sbjct 3707 GCGTGCTGCACCTGCGTGGGGAAAATCGTCTCTGGAACTGTAGATCAATCCGATGGTTCG 3648 Query 164183 TTCCTAGACGATGATCAG-ATTGCAGCAGGATTCGTGCTTACGTGTGTAGCATATCCAAC 164241 ||||| || ||||||||| | |||| || | ||| || || || || || ||||| || Sbjct 3647 TTCCTCGATGATGATCAGAAGAGCAG-TGGCTACGTCCTCACTTGCGTCGCCTATCCGAC 3589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562463952730320