Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq76306 111 3e-19 >seq76306 Length=4672 Score = 111 bits (122), Expect = 3e-19 Identities = 125/165 (76%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 48122 TAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAG 48181 ||||||| ||| || ||||| | ||| | || |||||||| ||||||| |||| ||| Sbjct 883 TAGAGCAAGCACGCGAAGTCGCAGTGGAGCCCCTCGTCCCGAGAGATGAGCTCGTTCGAG 942 Query 48182 AAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAG-AGCC 48240 |||| ||||||||||||| || | || ||||||||||||| || | | |||| || Sbjct 943 AAGCTTAGACCAGGCATGAGGCCTCGCTTCTTGAGCCAGAAAA-TGGCACAAAAGCTTCC 1001 Query 48241 AGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTC 48285 ||||||||| |||||||| || ||| || || |||||| || Sbjct 1002 AGAGAAGAATATGCCCTCAACGCACGCAAAGGCTAGGAGCCTTTC 1046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930299520437760