Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq95781 95.1 2e-14 >seq95781 Length=6618 Score = 95.1 bits (104), Expect = 2e-14 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 102821 GTTGGGTATGCCACGCAGGTCAGAACAAAACCTGCTTCTAGTTGATCGTCATCCAGAAAG 102880 || || || || ||||| || || | |||| |||| || |||| | || || || ||| Sbjct 4905 GTCGGATAAGCAACGCAAGTGAGGATGTAACCAGCTTTTAATTGACCATCGTCAAGGAAG 4964 Query 102881 GATTGATCTTCTTGATCTACAGTACCCGATTCAATCTTACCAGCACAAGTAGAACACGCA 102940 | |||||||||||| | ||||| || || || || || |||||||| ||||||| Sbjct 4965 GTTTGATCTTCTTGGTTCACAGTTCCAGAAATGATTTTGCCTGCACAAGTGGAACACGAG 5024 Query 102941 CCAGCACGACAGGAATAAGGCAGATCAACACCTGCTTCATCAGCAGCGTCTAGAATATAT 103000 || ||||| || || || ||||| || | || ||| || || |||| ||||| || Sbjct 5025 CCGGCACGGCACGAGTATGGCAGGTCCATGCCCTGTTCCTCCGCCACGTCCAGAATGTAC 5084 Query 103001 TG--ATCATCCTCA 103012 || ||||||||| Sbjct 5085 TGTACTCATCCTCA 5098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632674875507120