Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq76306 96.9 4e-14 >seq76306 Length=4672 Score = 96.9 bits (106), Expect = 4e-14 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||| ||| ||| | ||||| ||| || || ||||||||||| |||||| Sbjct 913 CCCTCGTCCCGAGAGATGAGCTCGTTCGAGAAGCTTAGACCAGGCATGAGGCCTCGCTTC 972 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| || ||||| || || || || ||||| || |||||||| ||| |||||| Sbjct 973 TTGAGCCAGAAAATGGCACAAAAGCTTCCAGAGAAGAATATGCCCTCAACGCACGCAAAG 1032 Query 869300 CCGATGAGCCGCTCGGCAAAG 869320 | | ||||| ||||||||| Sbjct 1033 GCTAGGAGCCTTTCGGCAAAG 1053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6098447401164738