Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq95781 89.7 6e-13 >seq95781 Length=6618 Score = 89.7 bits (98), Expect = 6e-13 Identities = 154/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 138536 AGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGTCGTGCTG 138595 ||||||| || || || || || | || || || || |||| ||||| || ||||| | Sbjct 3769 AGTACATTCTGGACGCCGCAGAGGCGGCGGGCATCGACGTTCCATACTCGTGCCGTGCCG 3710 Query 138596 GTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCTGACCAGT 138655 |||| || | ||||| | || ||| | || |||||||||||||| || || | Sbjct 3709 GTGCGTGCTGCACCTGCGTGGGGAAAATCGTCTCTGGAACTGTAGATCAATCCGATGGTT 3650 Query 138656 CTTTCCTTGATGATGACCA-AATTGCAGCAGGATTTATCATGACTTGCGTAGCATACCCC 138714 | ||||| |||||||| || || |||| || | || | |||||||| || || || Sbjct 3649 CGTTCCTCGATGATGATCAGAAGAGCAG-TGGCTACGTCCTCACTTGCGTCGCCTATCCG 3591 Query 138715 ACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACT 138755 || |||| | ||||||||| | || ||||| ||||| Sbjct 3590 ACGAGCGATCTCGTCATTGAAACTCACAAGGAGGAAGAACT 3550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 604865342052240