Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq95543 104 2e-17 >seq95543 Length=17727 Score = 104 bits (114), Expect = 2e-17 Identities = 118/156 (76%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 21743 CGCATACCCGAAATAGGCGACAAGTTCTGTTC-CGGCATGGCCCAGAAAGGCACCTGCGG 21801 ||||||||| |||| || ||||||||| || || || || | |||| || ||| ||| Sbjct 10871 CGCATACCCCAAATCGGTGACAAGTTCAGTAGTCGTCACGGTC-AGAAGGGTACCGTCGG 10929 Query 21802 GATGATCTATTCGCAAGAAAACATGCCATTCACATCTTCCGGCATGACCCCCGACATCAT 21861 |||| ||| | || ||| ||||||| |||||| || || |||||||||||||| Sbjct 10930 GATGGCCTACACTCAGGAAGACATGCCCTTCACACAAGAGGGTATCACCCCCGACATCAT 10989 Query 21862 CATCAACCCCAACTGCATTCCCTCCAGAATGACCAT 21897 | |||||||| || |||||| || |||||||||| Sbjct 10990 CGTCAACCCCCACGCCATTCCGTCTCGAATGACCAT 11025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520855112741520