Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq95781 111 2e-19 >seq95781 Length=6618 Score = 111 bits (122), Expect = 2e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 161552 CAGTACATTCTTGACGCAGCTGAGGAAGCGGGTGTGGACATCAACTACTCGTGTCGTGCA 161611 ||||||||||| |||| || |||||| ||| ||||| | |||||||| ||||| Sbjct 5086 CAGTACATTCTGGACGTGGCGGAGGAACAGGGCATGGACCTGCCATACTCGTGCCGTGCC 5027 Query 161612 GGCGCTTGTTCGTCGTGCGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGCGACCAG 161671 ||| | ||||| | || || || ||| || | ||||| || || ||||| || || Sbjct 5026 GGCTCGTGTTCCACTTGTGCAGGCAAAATCATTTCTGGAACTGTGAACCAAGAAGATCAA 4967 Query 161672 TCCTTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACTTGTGTTTCTTATCCC 161731 ||||||| ||||||| ||| | | |||||| ||| || ||||| ||| ||||||| Sbjct 4966 ACCTTCCTTGACGATGGTCAATTAAAAGCTGGTTACATCCTCACTTGCGTTGCTTATCCG 4907 Query 161732 ACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGAACT 161772 || ||||| | || || || | | || || ||||| || Sbjct 4906 ACCAGCGACTTGGTTATCGAAAGCCACAAGGAGGAGGATCT 4866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556916107398480