Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq145 84.2 2e-11 >seq145 Length=315748 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || || || || || |||||||| || || || || ||| || || || |||||| Sbjct 114042 GTCGACTCCTTCTGGATGTTGTAGTCCGCCAAGGTCCTGCCGTCCTCTAGCTGCTTACCA 113983 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || |||| ||||| ||||| || ||||| || ||||||||||| | | | || || || Sbjct 113982 GCGAAGATGAGACGCTGCTGGTCCGGAGGAATCCCTTCTTTGTC-CTGAATCTTCGTCTT 113924 Query 143108 AGC-TGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 143166 | | | || | ||||||| | || || || | || | |||||||||||| | || Sbjct 113923 AACATTGTCGATGGTGTCCGAGCTCTCCACCTCGAGGGTGATCGTCTTGCCGGTGAGGGT 113864 Query 143167 TTTTACGAATATTTGCAT 143184 ||| || || || ||||| Sbjct 113863 TTTCACAAAGATCTGCAT 113846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507009596038560