Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq37 95.1 5e-14 seq8 95.1 5e-14 seq145 89.7 2e-12 seq317 84.2 9e-11 seq147 84.2 9e-11 seq6 84.2 9e-11 >seq37 Length=1749879 Score = 95.1 bits (104), Expect = 5e-14 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 || ||||| ||||| || || | ||||| || || || | || || || ||| Sbjct 1606594 AAGATGAAGGAAACTGCTGAGGCCTTCCTTGGTCGCCCCGTGACCAAGGCTGTCATCACT 1606535 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || |||||||||||||| || ||| |||| |||||||| ||||| ||| |||||| Sbjct 1606534 GTGCCAGCTTATTTCAATGACGCCCAAAGGCAGGCAACTAAGGATGCTGGAAGGATTGCT 1606475 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCT 451440 || || | ||| | ||||| || || |||||||||||| |||| Sbjct 1606474 GGCTTGGAGGTTGCCAGGATTATCAACGAGCCTACAGCAGCTTCTCT 1606428 >seq8 Length=3908038 Score = 95.1 bits (104), Expect = 5e-14 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 || ||||| ||||| || || | ||||| || || || | || || || ||| Sbjct 2074072 AAGATGAAGGAAACTGCTGAGGCCTTCCTTGGTCGCCCCGTGACCAAGGCTGTCATCACT 2074131 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || |||||||||||||| || ||| |||| |||||||| ||||| ||| |||||| Sbjct 2074132 GTGCCAGCTTATTTCAATGACGCCCAAAGGCAGGCAACTAAGGATGCTGGAAGGATTGCT 2074191 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCT 451440 || || | ||| | ||||| || || |||||||||||| |||| Sbjct 2074192 GGCTTGGAGGTTGCCAGGATTATCAACGAGCCTACAGCAGCTTCTCT 2074238 >seq145 Length=315748 Score = 89.7 bits (98), Expect = 2e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || || || || || ||||| || || || || Sbjct 114302 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACCATCACTCTGGAGGTGGAGAGCTCG 114361 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | || || || || || ||||||||||||||||| || || Sbjct 114362 GACACTATTGACAACGTCAAGACGAAGATCCAGGACAAGGAAGGAATTCCTCCGGACCAG 114421 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | |||||| | ||||| ||||| || |||||| | || |||||||| ||||| Sbjct 114422 CAGCGACTTATTTTCGCTGGGAAGCAACTCGAGGATGGACGCACCTTGGCGGACTATAAC 114481 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| | || || ||| Sbjct 114482 ATCCAGAAGGAGTCGACCCTCCAC 114505 >seq317 Length=11171 Score = 84.2 bits (92), Expect = 9e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || |||||||| || || || ||||| || || || || Sbjct 10052 ATGCAGATTTTCGTCAAGACCCTGACTGGCAAGACCATCACTCTGGAGGTGGAGAGCTCG 10111 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | || || || || || ||||| |||||||| || || || Sbjct 10112 GATACGATTGACAACGTCAAGACTAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 10171 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | ||||| || || || ||||| | || ||||||||||||| Sbjct 10172 CAGCGTCTCATCTTTGCCGGGAAGCAGCTCGAGGATGGGCGTACCCTGGCGGATTATAAC 10231 Query 391230 ATTGATAAGGA 391240 || | ||||| Sbjct 10232 ATCCAGAAGGA 10242 >seq147 Length=303747 Score = 84.2 bits (92), Expect = 9e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || |||||||| || || || ||||| || || || || Sbjct 247468 ATGCAGATTTTCGTCAAGACCCTGACTGGCAAGACCATCACTCTGGAGGTGGAGAGCTCG 247527 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | || || || || || ||||| |||||||| || || || Sbjct 247528 GATACGATTGACAACGTCAAGACTAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 247587 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | ||||| || || || ||||| | || ||||||||||||| Sbjct 247588 CAGCGTCTCATCTTTGCCGGGAAGCAGCTCGAGGATGGGCGTACCCTGGCGGATTATAAC 247647 Query 391230 ATTGATAAGGA 391240 || | ||||| Sbjct 247648 ATCCAGAAGGA 247658 >seq6 Length=4135178 Score = 84.2 bits (92), Expect = 9e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || ||||| || || || ||||| || || || || Sbjct 622040 ATGCAGATCTTCGTCAAGACGCTCACTGGGAAGACAATCACTCTCGAGGTGGAGAGCTCG 622099 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | ||| ||| || || || ||||||||||| || || || || Sbjct 622100 GACACCATCGACAACGTCAAAACAAAGATCCAGGACAAGGAAGGAATCCCACCGGACCAG 622159 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||||| || || | ||||| || || || || || | || | |||||||| || Sbjct 622160 CAGCGTTTGATCTTTGCCGGGAAGCAGCTCGAGGACGGTCGGACCCTTGCGGATTACAAC 622219 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| |||| |||||||| || Sbjct 622220 ATCCAGAAGGAATCAACTCTTCACTTGGT 622248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975699212069864