Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq120 87.8 2e-12 seq88 87.8 2e-12 seq115 84.2 3e-11 >seq120 Length=468280 Score = 87.8 bits (96), Expect = 2e-12 Identities = 61/68 (90%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 136713 CTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||| ||||||||||||| ||||||||||||| |||||||||||||||| |||||||| || Sbjct 129802 CTTCTAGCTCAGTTGGTCAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGAGACC 129743 Query 136773 CGT-TGGG 136779 || |||| Sbjct 129742 TGTGTGGG 129735 >seq88 Length=828699 Score = 87.8 bits (96), Expect = 2e-12 Identities = 61/68 (90%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 136713 CTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||| ||||||||||||| ||||||||||||| |||||||||||||||| |||||||| || Sbjct 654038 CTTCTAGCTCAGTTGGTCAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGAGACC 653979 Query 136773 CGT-TGGG 136779 || |||| Sbjct 653978 TGTGTGGG 653971 >seq115 Length=538028 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 |||||||| |||| ||||||||||||| |||||||||||||| | |||||||| || | Sbjct 180896 TAGCTCAGCTGGTCAGAGCGTGGTGCTAATAACGCCAAGGTCGCAGGTTCGAGACCTGCA 180955 Query 136777 GGGAACAGCTTTTAGATATATTTTTT 136802 || ||||||| | || | |||||| Sbjct 180956 TGGGCCAGCTTTCATATTTTTTTTTT 180981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588970419452400