Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq758 758 0.0 >seq758 Length=186484 Score = 758 bits (840), Expect = 0.0 Identities = 769/995 (77%), Gaps = 6/995 (1%) Strand=Plus/Plus Query 163785 TTCTGCGAATGGGTGACTTCCACAAACAACCGCCTCTATGTTGGTTGGTTCGGCGTTCTG 163844 |||||||| ||| | || ||| | || ||||| || |||| |||||||| || ||| Sbjct 93109 TTCTGCGATTGGATCACCAGCACCGAAAATCGCCTTTACATTGGGTGGTTCGGTGTACTG 93168 Query 163845 ATGATCCCTACGCTGCTTGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 163903 |||||||| || ||| | | |||||| || || ||||| || || |||| ||||| Sbjct 93169 ATGATCCCGACCCTGTTAACTGCAACC-TCCGTATTCATTACTGCTTTTATCGCAGCTCC 93227 Query 163904 CCCTGTGGACATCGATGGTATTCGTGAACCTGTTGCAGGTTCGCTCATGTATGGTAACAA 163963 || || || || || |||||||| || || ||| | ||||| || || || || ||||| Sbjct 93228 GCCAGTAGATATTGACGGTATTCGCGAGCCCGTTTCTGGTTCTCTTATATACGGGAACAA 93287 Query 163964 CATCATCTCTGGTGCAGTTGTTCCCTCGTCCAATGCAATTGGTCTTCACTTCTACCCCAT 164023 || ||||||||||| || | ||| | ||| || || ||| | |||||||||||||| Sbjct 93288 TATAATCTCTGGTGCTATTATCCCCACCTCCGCCGCTATCGGTTTGCACTTCTACCCCAT 93347 Query 164024 TTGGGAAGCCGCATCCCTTGATGAATGGCTTTACAACGGTGGTCCTTTCCAACTTGTCGT 164083 ||||||||| ||||| ||||||||||||| |||||||| ||||| | | |||| |||| Sbjct 93348 TTGGGAAGCGGCATCTATTGATGAATGGCTATACAACGGCGGTCCCTACGAACTAATCGT 93407 Query 164084 CTTCCACTTCCTGATCG--GTATCTATGCATACATGGGTCGTGAGTGGGAACTGTCTTAC 164141 | ||||||||| | | ||| || ||| ||||||||||||||||||||||| | | Sbjct 93408 TCTTCACTTCCTGCTTGGAGTAGCT-TGC-TACATGGGTCGTGAGTGGGAACTTAGCTTC 93465 Query 164142 CGTCTTGGTATGCGTCCTTGGATTTGTGTTGCTTACTCTGCACCCGTTGCAGCAGCATCC 164201 || | |||||||| |||||||| |||||| ||||| || || |||||||| || || Sbjct 93466 CGCTTGGGTATGCGCCCTTGGATCGCTGTTGCGTACTCAGCCCCTGTTGCAGCCGCCACC 93525 Query 164202 GCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCGTTCTCTGACGCAATGCCCCTGGGC 164261 || || || || |||| ||| | |||||||| ||||| |||| ||||| | || Sbjct 93526 GCCGTTTTTTTGATCTACCCTATTGGTCAAGGAAGCTTCTCCGACGGTATGCCTTTAGGA 93585 Query 164262 ATCTCTGGCACCTTCAACTACATGTTGGTGTTCCAAGCAGAGCACAACATCCTGATGCAC 164321 ||||||||||||||||||| ||| | ||||||||||| || ||||||||||| ||||| Sbjct 93586 ATCTCTGGCACCTTCAACTTTATGATCGTGTTCCAAGCTGAACACAACATCCTTATGCAT 93645 Query 164322 CCCTTCCATATGCTCGGCGTTGCTGGCGTATTTGGCGGTTCTCTGTTCAGTGCAATGCAC 164381 || ||||| ||| | || || ||||||||||| ||||| ||||| |||||||| ||||| Sbjct 93646 CCGTTCCACATGTTGGGTGTGGCTGGCGTATTCGGCGGATCTCTATTCAGTGCTATGCAT 93705 Query 164382 GGTTCTCTGGTTACTTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTAT 164441 ||||| |||| |||||| ||| | || |||||||| || | ||| ||| ||| Sbjct 93706 GGTTCCTTGGTAACTTCTAGCCTGATCCGGGAAACCACTGAGAATGAATCCGCTAACGCG 93765 Query 164442 GGTTACAAGTTTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGCTCACGGTTACTTT 164501 ||||||| ||||||||| ||||| |||||||| |||||||| || |||||||||||||| Sbjct 93766 GGTTACAGGTTTGGTCAGGAAGAGGAAACATATAACATTGTAGCTGCTCACGGTTACTTC 93825 Query 164502 GGTCGTCTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 164561 ||||| ||||||||||||| ||| || || |||||||||||| | ||||| ||| | Sbjct 93826 GGTCGATTGATCTTCCAATATGCTAGCTTTAATAACTCCCGTTCCCTACACTTTTTCTTG 93885 Query 164562 GCTGCATGGCCTGTTGTTGGCATCTGGTTCACCGCACTTGGTGTTTCCACGATGGCATTC 164621 ||||| ||||| || || || |||||||| ||||| | || | ||| ||||| ||| Sbjct 93886 GCTGCTTGGCCAGTAGTAGGTATCTGGTTTACCGCTTTGGGCATAAGCACAATGGCTTTC 93945 Query 164622 AACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAAC 164681 ||||| |||||||||||||| ||||| ||| | | ||| | ||||| ||||| | ||| Sbjct 93946 AACCTAAACGGTTTCAACTTTAACCAATCCGTAGTTGATAGCCAGGGACGTGTCATAAAC 94005 Query 164682 ACTTGGGCAGACGTTCTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAAC 164741 || ||||| ||| || |||||||||| || |||||||| |||||||| || |||||| Sbjct 94006 ACATGGGCCGACATTATCAACCGCGCCAACCTTGGTATGGAGGTTATGCATGAACGTAAC 94065 Query 164742 GCTCACAACTTCCCTCTGGATCTCGCTGCTGCTGA 164776 ||||||||||||||||| ||||| ||| | | ||| Sbjct 94066 GCTCACAACTTCCCTCTAGATCTGGCTTCCGTTGA 94100 Score = 331 bits (366), Expect = 1e-85 Identities = 680/1009 (67%), Gaps = 8/1009 (1%) Strand=Plus/Plus Query 165206 GATGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 165265 |||||| ||| | |||| ||||| | || || ||| ||||||| || ||| || Sbjct 33908 GATGACCGGCCAAGGAGAGACCGTTTTGCATTCGTGGGTCGGTCTGGTCTATCGCTTCTT 33967 Query 165266 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCGCGACGAGTTGG 165325 || ||| ||| | || ||||||||| | || || || |||| | || || Sbjct 33968 CCTCGTGCCTATTTCTCTCCCGGCGGTTGGTTCACGGGTACAACTTCTGTCACCTCACGG 34027 Query 165326 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGTGCAAACTTTCTTACTGCGGCAGTT 165385 || |||||||| ||||| |||||||||| ||||||| |||| |||||| | || | Sbjct 34028 TACACTCACGGATTGGCTAGTTCCTATCCGGAGGGTCGCAACTCTCTTACCGTCGCTGCA 34087 Query 165386 TCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCAA 165445 || || || || || | ||||| | | | | || |||||||| ||||| ||| Sbjct 34088 TCCACCCCCGCCAACAGCCCAGCACATTCCCCGCCGTTGCTTTGGGGTCCCGAGGCGCAA 34147 Query 165446 GGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGG 165505 || |||||| | | ||| |||| | || || || ||| | || || || ||||| || Sbjct 34148 GGAGATTTCACCCGTTGGTGCCAATTAGGTGGTCTATGGACCTTCGTCGCCCTCCATGGT 34207 Query 165506 GCTTTCGCTCTAATTGGTTTCATGCTTCGTCAGTTTGAATTAGCACGTCTCATCGGT--- 165562 ||||| | | | || ||| ||| | || || | ||| | || || ||| || Sbjct 34208 GCTTTTGGTTTGATGGGTCCTATGTTGCGCCAATCCGAACTCGCTCG----ATCTGTGCA 34263 Query 165563 ATC-CGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTT 165621 ||| ||||| || || || || ||||| || | ||| ||||| |||| |||| ||| | Sbjct 34264 ATCGCGTCCGTATAACGCAATCGCGTTTTCCGCTCCCATCGCCGTTTCTGTTCCCGTATC 34323 Query 165622 TCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGC 165681 | ||| | || |||| || || || |||||| ||| || | ||| || ||||| Sbjct 34324 CTTGATCCATCCGTTGGGCCAGTCCGGTCGGTTTTCCGCACCCAGCTCCGGTGTAGCAGC 34383 Query 165682 AATCTTCAGGTTCCTTCTCTTCCTACAAGGATTCCATAACTGGACCTTGAATCCCTTTCA 165741 |||||| | | | | ||| ||| || || ||||||| |||||| | || || ||||| Sbjct 34384 CATCTTCCGATCCATCCTCCTCCCTCAGGGTCTCCATAATTGGACCCTCAACCCGTTTCA 34443 Query 165742 TATGATGGGTGTTGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTAC 165801 ||||||||| ||||| || | | ||||| ||| | ||| | || || | || Sbjct 34444 TATGATGGGAGTTGCTGGAGTACCGGGTGCTGCTCCCCCACGTGCTACTCACGGCGCAAC 34503 Query 165802 AGTAGAGAATACTCTGTATCAAGATGGTGACGATGCAAATACTTTCAAGGCATTTGACTC 165861 || |||||||| |||| | |||||||| | || ||||| ||| || | | | Sbjct 34504 CGTGGAGAATACACTGTTCGAGGATGGTGATGGCGCGAATACATTCCGCGCCTCCAATCC 34563 Query 165862 TACTCAAGAGGAAGAAACCTACTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTT 165921 || ||| ||||| || || || ||||||||||| || || || ||||| || | | Sbjct 34564 GACCCAATCTGAAGAGACTTATTCCATGGTTACTGCTAATCGCTTTTGGTCCCAAACATC 34623 Query 165922 CGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTAT 165981 |||| |||| || || | ||| || ||| ||| | || || || || | Sbjct 34624 CGGTGTTGCCCCCCCCAACAAACGTCGGTCACACTTCCCCATGTTATTCGTACCCGTCAC 34683 Query 165982 GGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGA 166041 ||| ||| ||| | || || | ||||||| || | || || || || ||||| Sbjct 34684 TGGTTCACGGATGAGTGCTATTGGAGTAGTTGGTCTAGCCCCGAATCTGCGGGCGTATGA 34743 Query 166042 CTTTGTATCCCAAGAGATCAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACGAA 166101 ||| || ||||| ||| | | ||||||||||| || ||||| ||||| ||||| || Sbjct 34744 CTTCGTCTCCCAGGAGGTGCGCGCAGCAGAAGATCCCGAGTTCGAAACTCCTTACACAAA 34803 Query 166102 AAACATTCTCTTGAATGAAGGTCTTCGTGCTTGGTTGGCACCAGTCGATCAACCGCATGA 166161 || ||||| | |||||| ||| ||||||||||| ||||| | ||||| || ||||| Sbjct 34804 GAATATTCTGTCGAATGAGGGTATTCGTGCTTGGATGGCAGCTCAGGATCAGCCTCATGA 34863 Query 166162 GAACTTTGTCTTCCCTGAAGAAGTTCTGCCTAGGGGTAACGCGCTGTGA 166210 ||| | || ||||| || || ||||| || | || ||||| || ||| Sbjct 34864 AAACCTCGTATTCCCCGAGGAGGTTCTACCCCGTGGAAACGCTCTTTGA 34912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556919523137520