Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq758 500 1e-136 >seq758 Length=186484 Score = 500 bits (554), Expect = 1e-136 Identities = 697/977 (71%), Gaps = 0/977 (0%) Strand=Plus/Plus Query 169696 GATTGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATC 169755 |||||| | || ||||| | || ||| | || |||| ||||||||||| |||||||| Sbjct 93115 GATTGGATCACCAGCACCGAAAATCGCCTTTACATTGGGTGGTTCGGTGTACTGATGATC 93174 Query 169756 CCATGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTG 169815 || || ||| | ||| | || || || |||||| ||||||||||| || || Sbjct 93175 CCGACCCTGTTAACTGCAACCTCCGTATTCATTACTGCTTTTATCGCAGCTCCGCCAGTA 93234 Query 169816 GACATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATC 169875 || || || || || | || || || | ||||| | || || || ||||| || ||| Sbjct 93235 GATATTGACGGTATTCGCGAGCCCGTTTCTGGTTCTCTTATATACGGGAACAATATAATC 93294 Query 169876 TCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAA 169935 |||||||| || | || | || ||| |||||| | |||||||| || ||||||||| Sbjct 93295 TCTGGTGCTATTATCCCCACCTCCGCCGCTATCGGTTTGCACTTCTACCCCATTTGGGAA 93354 Query 169936 GCAGCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCAC 169995 || ||| || | ||||| ||| | || ||||| ||||| || || || | | | ||| Sbjct 93355 GCGGCATCTATTGATGAATGGCTATACAACGGCGGTCCCTACGAACTAATCGTTCTTCAC 93414 Query 169996 TTCCTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGT 170055 ||||| | ||| | || |||||||||| | |||||||||| | ||| || ||| Sbjct 93415 TTCCTGCTTGGAGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGCTTCCGCTTGGGT 93474 Query 170056 ATGCGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTC 170115 ||||| ||||||||| ||| || || || || || || |||| || ||| || || Sbjct 93475 ATGCGCCCTTGGATCGCTGTTGCGTACTCAGCCCCTGTTGCAGCCGCCACCGCCGTTTTT 93534 Query 170116 TTAGTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGT 170175 || | || ||| | ||||| ||| ||||| ||||| |||||| |||| ||||| || Sbjct 93535 TTGATCTACCCTATTGGTCAAGGAAGCTTCTCCGACGGTATGCCTTTAGGAATCTCTGGC 93594 Query 170176 ACATTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCAT 170235 || || ||||| ||| |||| |||||||| || |||||||| |||||||| || ||||| Sbjct 93595 ACCTTCAACTTTATGATCGTGTTCCAAGCTGAACACAACATCCTTATGCATCCGTTCCAC 93654 Query 170236 ATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTT 170295 ||| || || ||||| | ||||| ||| | || ||| || ||||| ||||| | Sbjct 93655 ATGTTGGGTGTGGCTGGCGTATTCGGCGGATCTCTATTCAGTGCTATGCATGGTTCCTTG 93714 Query 170296 GTAACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAA 170355 ||||| ||| || ||| | || || || || || || || ||| || |||| Sbjct 93715 GTAACTTCTAGCCTGATCCGGGAAACCACTGAGAATGAATCCGCTAACGCGGGTTACAGG 93774 Query 170356 TTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTT 170415 || || || ||||| |||||||| |||||||| || || || || ||||| ||| || | Sbjct 93775 TTTGGTCAGGAAGAGGAAACATATAACATTGTAGCTGCTCACGGTTACTTCGGTCGATTG 93834 Query 170416 ATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTC 170475 ||||||||||||||||||||||| || ||| || ||||| ||| | ||| | | Sbjct 93835 ATCTTCCAATATGCTAGCTTTAATAACTCCCGTTCCCTACACTTTTTCTTGGCTGCTTGG 93894 Query 170476 CCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAAT 170535 || |||||| | |||||||| || | |||| || |||||||||| || ||||| || Sbjct 93895 CCAGTAGTAGGTATCTGGTTTACCGCTTTGGGCATAAGCACAATGGCTTTCAACCTAAAC 93954 Query 170536 GGATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCA 170595 || || ||||| ||||| || | || ||| | || || | |||||||| Sbjct 93955 GGTTTCAACTTTAACCAATCCGTAGTTGATAGCCAGGGACGTGTCATAAACACATGGGCC 94014 Query 170596 GACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAAC 170655 ||| || | ||| | || ||||| |||||||| || |||||||| ||||| || |||||| Sbjct 94015 GACATTATCAACCGCGCCAACCTTGGTATGGAGGTTATGCATGAACGTAACGCTCACAAC 94074 Query 170656 TTCCCACTTGACTTGGC 170672 ||||| || || |||| Sbjct 94075 TTCCCTCTAGATCTGGC 94091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582842477515200