Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq758 443 6e-120 >seq758 Length=186484 Score = 443 bits (490), Expect = 6e-120 Identities = 699/986 (71%), Gaps = 18/986 (2%) Strand=Plus/Plus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || || || ||| | || || || || || || || || | || |||||||| || || Sbjct 93109 TTCTGCGATTGGATCACCAGCACCGAAAATCGCCTTTACATTGGGTGGTTCGGTGTACTG 93168 Query 25862 ATGAT----ACCCTGCTTACTCGCAGCCACTACATGTTTTATACTTGCCTTCATCGCAGC 25917 ||||| |||||| | ||| ||| || | | | || |||| || || |||||||| Sbjct 93169 ATGATCCCGACCCTGTTAACT-GCAACCTC--CGTATTCATTACT-GCTTTTATCGCAGC 93224 Query 25918 ACCGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAA 25977 ||||| |||||||| || || || || ||||| ||||| || || | || ||||| || Sbjct 93225 TCCGCCAGTAGATATTGACGGTATTCGCGAGCCCGTTTCTGGTTCTCTTATATACGGGAA 93284 Query 25978 CAATATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCC 26037 ||||||||| || || || | ||||| |||| ||| ||||| | || || ||||| Sbjct 93285 CAATATAATCTCTGGTGCTATTATCCCCACCTCCGCCGCTATCGGTTTGCACTTCTACCC 93344 Query 26038 GATCTGGGAAGCTGGCA-CACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCA 26096 || |||||||| |||| | | || || ||||||||||| ||||| || || |||| | Sbjct 93345 CATTTGGGAAGC-GGCATCTATTGATGAATGGCTATACAACGGCGGTCCCTACGAACTAA 93403 Query 26097 TTATCTTCCACTTCTTAATAGGAGTAGCA-GC-ATATGCAGGGAGACAGTGGGAACT-AT 26153 | | | |||||| | | |||||||| || | ||| || | |||||||||| | Sbjct 93404 TCGTTCTTCACTTCCTGCTTGGAGTAGCTTGCTACATG--GGTCGTGAGTGGGAACTTAG 93461 Query 26154 CTTACAGACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAG 26213 ||| | | | || ||| | || ||||| |||||| || |||| || | | || | Sbjct 93462 CTTCC-GCTTGGGTATGCGCCCTTGGATCGCTGTTGCGTACTCAGCCCCTGTTGCAGCCG 93520 Query 26214 CTCTCGCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTC 26273 | ||| || || || | || ||| | || ||||| || || || || |||||| Sbjct 93521 CCACCGCCGTTTTTTTGATCTACCCTATTGGTCAAGGAAGCTTCTCCGACGGTATGCCTT 93580 Query 26274 TTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCA 26333 | || |||||||| || || ||||||||| |||| |||||||| ||||| || || || | Sbjct 93581 TAGGAATCTCTGGCACCTTCAACTTTATGATCGTGTTCCAAGCTGAACACAACATCCTTA 93640 Query 26334 TGCACCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTA 26393 |||| || ||||| ||| ||||| ||||| || ||||| ||| |||| ||| ||||| Sbjct 93641 TGCATCCGTTCCACATGTTGGGTGTGGCTGGCGTATTCGGCGGATCTCTATTCAGTGCTA 93700 Query 26394 TGCACGGAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGA 26453 |||| || ||||| ||||| || || ||||| || ||| | | || | Sbjct 93701 TGCATGGTTCCTTGGTAACTTCTAGCCTGATCCGGGAAACCACTGAGAATGAATCCGCTA 93760 Query 26454 ATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGT 26513 | || || | |||||| || || || || |||||||| ||||| ||||| ||||| | Sbjct 93761 ACGCGGGTTACAGGTTTGGTCAGGAAGAGGAAACATATAACATTGTAGCTGCTCACGGTT 93820 Query 26514 ACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCT 26573 |||| || |||| || || || ||||| || ||||||||| |||||| || || || | Sbjct 93821 ACTTCGGTCGATTGATCTTCCAATATGCTAGCTTTAATAACTCCCGTTCCCTACACTT-T 93879 Query 26574 TTCTTG-CTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATG 26632 |||||| || ||||||| || || || || ||| | || || |||| || |||||||| Sbjct 93880 TTCTTGGCTGCTTGGCCAGTAGTAGGTATCTGGTTTACCGCTTTGGGCATAAGCACAATG 93939 Query 26633 GCATTTAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATA 26692 || || |||||||| ||||| ||||||||||| || ||||| ||| | ||| | Sbjct 93940 GCTTTCAACCTAAACGGTTTCAACTTTAACCAATCCGTAGTTGATAGCCAGGGACGTGTC 93999 Query 26693 ATACCTACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAG 26752 ||| |||||||| || | | ||||| || ||||| || | || |||||||| || Sbjct 94000 ATAAACACATGGGCCGACATTATCAACCGCGCCAACCTTGGTATGGAGGTTATGCATGAA 94059 Query 26753 CGTAATGCTCATAACTTTCCACTTGA 26778 ||||| ||||| ||||| || || || Sbjct 94060 CGTAACGCTCACAACTTCCCTCTAGA 94085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146725079278992