Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq758 545 7e-151 >seq758 Length=186484 Score = 545 bits (604), Expect = 7e-151 Identities = 715/985 (73%), Gaps = 4/985 (0%) Strand=Plus/Minus Query 21462 TCCACGGATGCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAG 21521 || ||||| || || || || ||||||||||| ||||| || |||||||| ||||| | Sbjct 94100 TCAACGGAAGCCAGATCTAGAGGGAAGTTGTGAGCGTTACGTTCATGCATAACCTCCATA 94041 Query 21522 CCAAGGTTGGCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCT 21581 ||||||||||| ||||| | |||||| ||||| ||||| || || |||| | | | Sbjct 94040 CCAAGGTTGGCGCGGTTGATAATGTCGGCCCATGTGTTTATGACACGTCCCTGGCTATCA 93981 Query 21582 AGCAGAGATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGC 21641 | | |||||||||||||||||||| || | |||||||||||| || | ||| | Sbjct 93980 ACTACGGATTGGTTAAAGTTGAAACCGTTTAGGTTGAAAGCCATTGTGCTTATGCCCAAA 93921 Query 21642 GCAGCAAACCAAATACCTACAACAGGCCAGGCAGC-AAGAAAGAAATGAAGACTACGGGA 21700 || | |||||| |||||||| || ||||| ||||| |||||| || || || |||||| Sbjct 93920 GCGGTAAACCAGATACCTACTACTGGCCAAGCAGCCAAGAAA-AAGTGTAGGGAACGGGA 93862 Query 21701 ATTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAAT 21760 |||||||||||||||||||||||||| | ||||| || || ||||||||||| ||||| Sbjct 93861 GTTATTAAAGCTAGCATATTGGAAGATCAATCGACCGAAGTAACCGTGAGCAGCTACAAT 93802 Query 21761 ATTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGT 21820 || || || || || || ||||||||| ||||||| ||| || | | ||||| Sbjct 93801 GTTATATGTTTCCTCTTCCTGACCAAACCTGTAACCCGCGTTAGCGGATTCATTCTCAGT 93742 Query 21821 CGTCTCACGAATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCC 21880 || || || || || || || |||| | ||| ||||||||| ||| | | || Sbjct 93741 GGTTTCCCGGATCAGGCTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGAGATCC 93682 Query 21881 ACCAAATACGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGC 21940 || |||||||| |||||||||| |||||| || ||||||||||| || ||||| ||||| Sbjct 93681 GCCGAATACGCCAGCCACACCCAACATGTGGAACGGATGCATAAGGATGTTGTGTTCAGC 93622 Query 21941 CTGGAACACCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAA 22000 |||||||| | ||| ||||||||||||| || || || || |||||| | || || || Sbjct 93621 TTGGAACACGATCATAAAGTTGAAGGTGCCAGAGATTCCTAAAGGCATACCGTCGGAGAA 93562 Query 22001 AGAGCCCTGTCCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGA 22060 || || |||| || || | | || || || || || || || ||||| || || Sbjct 93561 GCTTCCTTGACCAATAGGGTAGATCAAAAAAACGGCGGTGGCGGCTGCAACAGGGGCTGA 93502 Query 22061 GTACGCAACAAAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCC 22120 |||||||||| |||||| || | ||| || | || |||||||||||||||| || || Sbjct 93501 GTACGCAACAGCGATCCAAGGGCGCATACCCAAGCGGAAGCTAAGTTCCCACTCACGACC 93442 Query 22121 CATGTAAGCAAAG-ACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGT 22179 |||||| |||| || |||| |||||||| | ||| | |||| | | |||||||||| Sbjct 93441 CATGTA-GCAAGCTACTCCAAGCAGGAAGTGAAGAACGATTAGTTCGTAGGGACCGCCGT 93383 Query 22180 TGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGG 22239 |||| ||||||||||||| | || ||||||||||| ||||||||||| | ||||| | Sbjct 93382 TGTATAGCCATTCATCAATAGATGCCGCTTCCCAAATGGGGTAGAAGTGCAAACCGATAG 93323 Query 22240 CATTACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAG 22299 | | | || | | || || || || || ||||| || || | || || |||| Sbjct 93322 CGGCGGAGGTGGGGATAATAGCACCAGAGATTATATTGTTCCCGTATATAAGAGAACCAG 93263 Query 22300 CGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAA 22359 ||||| || || || || || || || || || || || | | ||| || |||| | Sbjct 93262 AAACGGGCTCGCGAATACCGTCAATATCTACTGGCGGAGCTGCGATAAAAGCAGTAATGA 93203 Query 22360 AACAAGTTGTAGCGGCAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAAA 22419 | | || || | | ||| ||| ||||| || || |||||||| || | |||| Sbjct 93202 ATACGGAGGTTGCAGTTAACAGGGTCGGGATCATCAGTACACCGAACCACCCAATGTAAA 93143 Query 22420 GACGGTTATTAGTAGAGGTGACCCA 22444 | || || | || ||||| ||| Sbjct 93142 GGCGATTTTCGGTGCTGGTGATCCA 93118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146206683945240