Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq758 471 5e-128 >seq758 Length=186484 Score = 471 bits (522), Expect = 5e-128 Identities = 693/978 (71%), Gaps = 2/978 (0%) Strand=Plus/Minus Query 7897 TCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTTGCTCTG 7956 |||| ||||||||||| || || | |||||||||||| |||||||| | ||| || | | Sbjct 94085 TCTAGAGGGAAGTTGTGAGCGTTACGTTCATGCATAACCTCCATACCAAGGTTGGCGCGG 94026 Query 7957 TTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGATTGGTTA 8016 || | | ||| ||||||| |||| || | |||||| || ||||||||| Sbjct 94025 TTGATAATGTCGGCCCATGTGTTTATGACACGTCCCTGGCTATCAACTACGGATTGGTTA 93966 Query 8017 AAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAACCAAACA 8076 ||||| || ||||| ||||| || |||||||||| || |||| || || ||||| | | Sbjct 93965 AAGTTGAAACCGTTTAGGTTGAAAGCCATTGTGCTTATGCCCAAAGCGGTAAACCAGATA 93906 Query 8077 CATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTTAAACGATGCA 8136 | ||| ||||| | | ||| | ||| ||||| || | ||| ||||| ||| Sbjct 93905 CCTACTACTGGCCAAGCAGCCAAGAAAAAGTGTAGGGAACGGGAGTTATTAAAGCTAGCA 93846 Query 8137 TACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGTCTCTTCT 8196 || |||||||| |||| ||| ||||| || |||||||| ||||| ||||| || || ||| Sbjct 93845 TATTGGAAGATCAATCGACCGAAGTAACCGTGAGCAGCTACAATGTTATATGTTTCCTCT 93786 Query 8197 TCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTGATTAGA 8256 || ||||||||| | ||||| ||| || || | ||||| || || | ||| || Sbjct 93785 TCCTGACCAAACCTGTAACCCGCGTTAGCGGATTCATTCTCAGTGGTTTCCCGGATCAGG 93726 Query 8257 GAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACATACCTGCT 8316 ||| || || || ||||| |||||||||||||| || ||||| ||||| | || || Sbjct 93725 CTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGAGATCCGCCGAATACGCCAGCC 93666 Query 8317 ACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATACGAACATG 8376 || || ||| ||||| ||||||||||| ||||| || || |||||||| |||| ||| Sbjct 93665 ACACCCAACATGTGGAACGGATGCATAAGGATGTTGTGTTCAGCTTGGAACACGATCATA 93606 Query 8377 AAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTGACCAAAT 8436 ||||| || || ||||| || |||| |||||| || || ||||| || ||||||| Sbjct 93605 AAGTTGAAGGTGCCAGAGATTCCTAAAGGCATACCGTCGGAGAAGCTTCCTTGACCAATA 93546 Query 8437 GGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTACACAGATC 8496 || || | || || || ||| || || | || || || || || ||| |||| Sbjct 93545 GGGTAGATCAAAAAAACGGCGGTGGCGGCTGCAACAGGGGCTGAGTACGCAACAGCGATC 93486 Query 8497 CATGGTCTCATACCTAAGCGGTATGATAA-CTCCCACTGTCTACCCATGTAAGCAGAAAT 8555 || || | |||||| |||||| | | ||| ||||||| | ||||||||| || | Sbjct 93485 CAAGGGCGCATACCCAAGCGG-AAGCTAAGTTCCCACTCACGACCCATGTAGCAAGCTAC 93427 Query 8556 TCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACCACTCATC 8615 ||||| |||||||| | | | | | || ||||| ||||| || | ||| ||||| Sbjct 93426 TCCAAGCAGGAAGTGAAGAACGATTAGTTCGTAGGGACCGCCGTTGTATAGCCATTCATC 93367 Query 8616 TAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAGATGGAAC 8675 | | || |||||||||||||| |||||||| || || |||||| ||| | || | Sbjct 93366 AATAGATGCCGCTTCCCAAATGGGGTAGAAGTGCAAACCGATAGCGGCGGAGGTGGGGAT 93307 Query 8676 GACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGTTCACGAAT 8735 | |||||||||||| || ||||| || || || | ||||| | ||| || || ||||| Sbjct 93306 AATAGCACCAGAGATTATATTGTTCCCGTATATAAGAGAACCAGAAACGGGCTCGCGAAT 93247 Query 8736 ACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAGCAGCAGC 8795 |||||| ||||| || || ||||| || ||||| || || || | | |||| Sbjct 93246 ACCGTCAATATCTACTGGCGGAGCTGCGATAAAAGCAGTAATGAATACGGAGGTTGCAGT 93187 Query 8796 TAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTTGTTTGTACT 8855 ||||| | || ||||| || || || ||||| || | ||||| | || | || || Sbjct 93186 TAACAGGGTCGGGATCATCAGTACACCGAACCACCCAATGTAAAGGCGATTTTCGGTGCT 93127 Query 8856 TGTAACCCACTCGCAAAA 8873 || | ||| ||||| || Sbjct 93126 GGTGATCCAATCGCAGAA 93109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615856564703760