Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq758 545 7e-151 >seq758 Length=186484 Score = 545 bits (604), Expect = 7e-151 Identities = 715/985 (73%), Gaps = 4/985 (0%) Strand=Plus/Plus Query 41243 TGGGTCACCTCTACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTTATGATTCCG 41302 ||| ||||| || | || || ||||| | || |||||||| || || ||||| ||| Sbjct 93118 TGGATCACCAGCACCGAAAATCGCCTTTACATTGGGTGGTTCGGTGTACTGATGATCCCG 93177 Query 41303 TGCCTCCTTGCCGCTACAACTTGTTTTATTATCGCCTTTGTTGGCGCACCACCTGTTGAC 41362 ||| | | || || | || |||| || ||| | | || || || || || Sbjct 93178 ACCCTGTTAACTGCAACCTCCGTATTCATTACTGCTTTTATCGCAGCTCCGCCAGTAGAT 93237 Query 41363 ATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATATCA 41422 || || || || || || ||||| |||| || || | || || ||||| || || || Sbjct 93238 ATTGACGGTATTCGCGAGCCCGTTTCTGGTTCTCTTATATACGGGAACAATATAATCTCT 93297 Query 41423 GGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCT 41482 || || | | || | | || ||||| | ||||||||||| ||||||||||| Sbjct 93298 GGTGCTATTATCCCCACCTCCGCCGCTATCGGTTTGCACTTCTACCCCATTTGGGAAGCG 93357 Query 41483 GCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTCCAACTCACCGTATTCCACTTC 41542 || | ||||||||||||| |||||||||||||| | | |||| | ||| | |||||| Sbjct 93358 GCATCTATTGATGAATGGCTATACAACGGCGGTCCCTACGAACTAATCGTTCTTCACTTC 93417 Query 41543 CTCATTGGCGT-CTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGAT 41601 || |||| || |||| |||||||| || |||||||||||||||| || | || || Sbjct 93418 CTGCTTGGAGTAGCTTGC-TACATGGGTCGTGAGTGGGAACTTAGCTTCCGCTTGGGTAT 93476 Query 41602 GAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCT 41661 | | || |||||| |||||||||||| || ||||| || || || || || || || | Sbjct 93477 GCGCCCTTGGATCGCTGTTGCGTACTCAGCCCCTGTTGCAGCCGCCACCGCCGTTTTTTT 93536 Query 41662 TGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCAC 41721 | || || |||| || || || || || | |||||| || || || || ||||| Sbjct 93537 GATCTACCCTATTGGTCAAGGAAGCTTCTCCGACGGTATGCCTTTAGGAATCTCTGGCAC 93596 Query 41722 CTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACAT 41781 |||||||| ||| | |||||||| ||||| ||||| || ||||||||||| || ||||| Sbjct 93597 CTTCAACTTTATGATCGTGTTCCAAGCTGAACACAACATCCTTATGCATCCGTTCCACAT 93656 Query 41782 GCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGT 41841 | |||||||||| |||||||| || || | | ||| ||||||||| ||| | |||| Sbjct 93657 GTTGGGTGTGGCTGGCGTATTCGGCGGATCTCTATTCAGTGCTATGCATGGTTCCTTGGT 93716 Query 41842 CACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAAGTT 41901 || || || || || || || ||||| | | || ||| ||||||| ||| Sbjct 93717 AACTTCTAGCCTGATCCGGGAAACCACTGAGAATGAATCCGCTAACGCGGGTTACAGGTT 93776 Query 41902 TGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTAT 41961 |||||| || || || || || || ||||| ||||||||||| || || ||||| | || Sbjct 93777 TGGTCAGGAAGAGGAAACATATAACATTGTAGCTGCTCACGGTTACTTCGGTCGATTGAT 93836 Query 41962 CTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTT-GCTGCCTGGC 42020 |||||||||||||||||||||||| |||||| || || || |||||| ||||| |||| Sbjct 93837 CTTCCAATATGCTAGCTTTAATAACTCCCGTTCCCTACACTT-TTTCTTGGCTGCTTGGC 93895 Query 42021 CTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTCAACTTGAATG 42080 | || |||||||| |||||| | || | ||| | || |||||||||||| | || | Sbjct 93896 CAGTAGTAGGTATCTGGTTTACCGCTTTGGGCATAAGCACAATGGCTTTCAACCTAAACG 93955 Query 42081 GTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAACACCTGGGCTG 42140 ||||||||||||||||||| | | | | | |||| || || ||||| ||||| | Sbjct 93956 GTTTCAACTTTAACCAATCCGTAGTTGATAGCCAGGGACGTGTCATAAACACATGGGCCG 94015 Query 42141 ACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGCACACAACT 42200 ||||| | ||||| ||||||||||| | ||||| |||||||| || ||||| ||||||| Sbjct 94016 ACATTATCAACCGCGCCAACCTTGGTATGGAGGTTATGCATGAACGTAACGCTCACAACT 94075 Query 42201 TCCCGCTTGACCTTGCATCCGTGGA 42225 |||| || || || || ||||| || Sbjct 94076 TCCCTCTAGATCTGGCTTCCGTTGA 94100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146213083887632