Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq758 479 8e-131 >seq758 Length=186484 Score = 479 bits (530), Expect = 8e-131 Identities = 692/969 (71%), Gaps = 8/969 (1%) Strand=Plus/Plus Query 42316 AACCGTCTTTATGTTGGGTGGTTTGGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACC 42375 || || ||||| |||||||||| ||||| |||||||| || ||| | |||| ||| Sbjct 93136 AATCGCCTTTACATTGGGTGGTTCGGTGTACTGATGATCCCGACCCTGTTAACTGCAACC 93195 Query 42376 ACCTGTTTTATTGTCGCTTTCATTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAA 42435 || || ||| ||||| || || || || || ||||| ||||| || ||||| || Sbjct 93196 TCCGTATTCATTACTGCTTTTATCGCAGCTCCGCCAGTAGATATTGACGGTATTCGCGAG 93255 Query 42436 CCTGTCTCTGGCTCTCTTCTGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGC 42495 || || ||||| |||||| | || || ||||| || ||||||||||| | | || | | Sbjct 93256 CCCGTTTCTGGTTCTCTTATATACGGGAACAATATAATCTCTGGTGCTATTATCCCCACC 93315 Query 42496 AGTAACGCAATTGGACTACATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGG 42555 ||| || || | || || || | || |||||||| | |||| |||||| Sbjct 93316 TCCGCCGCTATCGGTTTGCACTTCTACCCCATTTGGGAAGCGGCATCTATTGATGAATGG 93375 Query 42556 CTCTACAATGGCGGACCTTATCAGCTCGTCGTGTTCCACTTCCTTATCGG--TATCTTCT 42613 || ||||| ||||| || || | || |||| | |||||||| | || || ||| Sbjct 93376 CTATACAACGGCGGTCCCTACGAACTAATCGTTCTTCACTTCCTGCTTGGAGTAGCTTGC 93435 Query 42614 CTTACTTGGGACGCGAATGGGAACTTTCGTACCGACTTGGG-ATGAGGCCCTGGATCTTT 42672 ||| |||| || || ||||||||| | ||| |||||| ||| | || |||||| | Sbjct 93436 --TACATGGGTCGTGAGTGGGAACTTAGCTTCCG-CTTGGGTATGCGCCCTTGGATCGCT 93492 Query 42673 GTTGCTTACTCTGCCCCTGTGGCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGG 42732 ||||| ||||| |||||||| || || || || || || || | |||| || |||| Sbjct 93493 GTTGCGTACTCAGCCCCTGTTGCAGCCGCCACCGCCGTTTTTTTGATCTACCCTATTGGT 93552 Query 42733 CAAGGTTCTTTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTG 42792 ||||| || || || || |||||| | || || || || || |||||||| ||| | Sbjct 93553 CAAGGAAGCTTCTCCGACGGTATGCCTTTAGGAATCTCTGGCACCTTCAACTTTATGATC 93612 Query 42793 GTCTTCCAGGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGC 42852 || ||||| |||||||| ||||| ||||||||||| ||||| ||| | ||||| || ||| Sbjct 93613 GTGTTCCAAGCTGAACACAACATCCTTATGCATCCGTTCCACATGTTGGGTGTGGCTGGC 93672 Query 42853 GTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTG 42912 ||||| || || || | ||| |||||||||||| | || || ||| || | Sbjct 93673 GTATTCGGCGGATCTCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGCCTGATC 93732 Query 42913 CGTGAAACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAG 42972 || ||||| ||||| || ||| | || || |||| ||| ||||| || ||||| Sbjct 93733 CGGGAAACCACTGAGAATGAATCCGCTAACGCGGGTTACAGGTTTGGTCAGGAAGAGGAA 93792 Query 42973 ACTTATAACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCG 43032 || ||||||||||| || || || |||||||| || || | |||||||||||||| Sbjct 93793 ACATATAACATTGTAGCTGCTCACGGTTACTTCGGTCGATTGATCTTCCAATATGCTAGC 93852 Query 43033 TTTAATAATAGTCGCTCTTTGCACTTCTTTCTT-GCCGCTTGGCCCGTTGTGGGGATTTG 43091 |||||||| || || | ||||| |||||| || |||||||| || || || || || Sbjct 93853 TTTAATAACTCCCGTTCCCTACACTT-TTTCTTGGCTGCTTGGCCAGTAGTAGGTATCTG 93911 Query 43092 GTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCA 43151 ||| || || | ||| | || || ||||| || ||| | || ||||| ||||||||||| Sbjct 93912 GTTTACCGCTTTGGGCATAAGCACAATGGCTTTCAACCTAAACGGTTTCAACTTTAACCA 93971 Query 43152 ATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTGC 43211 ||| | ||||||| ||| | |||||| || ||||| || ||| | || || || Sbjct 93972 ATCCGTAGTTGATAGCCAGGGACGTGTCATAAACACATGGGCCGACATTATCAACCGCGC 94031 Query 43212 CAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 ||||||||| | ||||| ||||| || || || || || |||||||| || ||||| || Sbjct 94032 CAACCTTGGTATGGAGGTTATGCATGAACGTAACGCTCACAACTTCCCTCTAGATCTGGC 94091 Query 43272 ATCCGTGGA 43280 ||||| || Sbjct 94092 TTCCGTTGA 94100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143531508025384