Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq758 443 6e-120 >seq758 Length=186484 Score = 443 bits (490), Expect = 6e-120 Identities = 699/986 (71%), Gaps = 18/986 (2%) Strand=Plus/Minus Query 25883 TCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTAGCTCGG 25942 || || || ||||| ||||| ||||| || |||||||| || | || ||||| || ||| Sbjct 94085 TCTAGAGGGAAGTTGTGAGCGTTACGTTCATGCATAACCTCCATACCAAGGTTGGCGCGG 94026 Query 25943 TTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGACTGGTTA 26002 || | | || |||||||| ||| | ||| | ||| ||||| || |||||| Sbjct 94025 TTGATAATGTCGGCCCATGTGTTTATGACACGTCCCTGGCTATCAACTACGGATTGGTTA 93966 Query 26003 AAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGCCATATG 26062 ||||| ||||| |||||||| || |||||||||| || |||| || || | ||| || Sbjct 93965 AAGTTGAAACCGTTTAGGTTGAAAGCCATTGTGCTTATGCCCAAAGCGGTAAACCAGATA 93906 Query 26063 CCAACAACCGGCCAAGTAG-CAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAACTCGC 26121 || || || ||||||| || ||||||| || || || |||||| ||||||||| || || Sbjct 93905 CCTACTACTGGCCAAGCAGCCAAGAAA-AAGTGTAGGGAACGGGAGTTATTAAAGCTAGC 93847 Query 26122 ATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTCTCTTC 26181 ||| || || || |||| || ||||| ||||| ||||| ||||| |||||||| || || Sbjct 93846 ATATTGGAAGATCAATCGACCGAAGTAACCGTGAGCAGCTACAATGTTATATGTTTCCTC 93787 Query 26182 ATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTCTGCAATAAG 26241 || || |||||| | || || || || | | ||| || ||||| || || Sbjct 93786 TTCCTGACCAAACCTGTAACCCGCGTTAGCGGATTCATTCTCAGTGGTTTCCCGGATCAG 93727 Query 26242 TGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAACCCCAGC 26301 ||||| ||||| || ||||||||| ||| |||| ||| ||||| || ||||| Sbjct 93726 GCTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGAGATCCGCCGAATACGCCAGC 93667 Query 26302 AACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAATACGAACAT 26361 ||||| ||| ||||| || ||||| || || || ||||| |||||||| |||| ||| Sbjct 93666 CACACCCAACATGTGGAACGGATGCATAAGGATGTTGTGTTCAGCTTGGAACACGATCAT 93607 Query 26362 AAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCCTTGTCCGAA 26421 |||||| || || |||||||| || | |||||| || || || || ||||| || | Sbjct 93606 AAAGTTGAAGGTGCCAGAGATTCCTAAAGGCATACCGTCGGAGAAGCTTCCTTGACCAAT 93547 Query 26422 AGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGCAACAAATAT 26481 ||| || | || || || ||| || || | | || |||| || |||||| || Sbjct 93546 AGGGTAGATCAAAAAAACGGCGGTGGCGGCTGCAACAGGGGCTGAGTACGCAACAGCGAT 93487 Query 26482 CCATGGTCTCATTCCTAGTCTGTAAGAT-AGTTCCCACTGTCTCCCTGCATAT-GC-TGC 26538 ||| || | ||| || | | | ||| | |||||||||| | || ||| | || || Sbjct 93486 CCAAGGGCGCATACCCAAGC-GGAAGCTAAGTTCCCACTCACGACC--CATGTAGCAAGC 93430 Query 26539 TACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGCCACTC 26598 |||||| | | |||||| | | || |||| || || ||||| ||||||||||| || Sbjct 93429 TACTCCAAGCAGGAAGTGAAGAACGATTAGTTCGTAGGGACCGCCGTTGTATAGCCATTC 93370 Query 26599 GTCCAGTG-TGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGGAGG 26657 || | | |||| |||||||| || ||||| || || | ||||| ||| |||| || Sbjct 93369 ATCAATAGATGCC-GCTTCCCAAATGGGGTAGAAGTGCAAACCGATAGCGGCGGAGGTGG 93311 Query 26658 GGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGCTCAC 26717 ||| | || || || ||||||||||| ||||| || | || || ||||| ||||| | Sbjct 93310 GGATAATAGCACCAGAGATTATATTGTTCCCGTATATAAGAGAACCAGAAACGGGCTCGC 93251 Query 26718 GTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAAACATGTAGTGG 26777 | || || || |||||||| ||||| |||||||| || || |||| || | | | || Sbjct 93250 GAATACCGTCAATATCTACTGGCGGAGCTGCGATAAAAGC-AGTAATGAATACG--GAGG 93194 Query 26778 CTGCGAGTAAGCAGGGT----ATCATAAGCACCCCGAACCATCCCACATAGAGACGGTTC 26833 ||| ||| | |||||| ||||| || || |||||||| || | || || || || Sbjct 93193 TTGC-AGTTAACAGGGTCGGGATCATCAGTACACCGAACCACCCAATGTAAAGGCGATTT 93135 Query 26834 TCAGTACTTGTAACCCACTCACAAAA 26859 || || || || | ||| || || || Sbjct 93134 TCGGTGCTGGTGATCCAATCGCAGAA 93109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147710670407360