Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20moellendorffii_20[refseq_20GCF_5F000143415.3_202010- 07-06] 758 sequences; 212,501,708 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq758 581 4e-161 >seq758 Length=186484 Score = 581 bits (644), Expect = 4e-161 Identities = 712/969 (73%), Gaps = 2/969 (0%) Strand=Plus/Plus Query 154993 GACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGCT 155052 || || ||| | || | || ||||||||||| || |||||||| ||| | |||| Sbjct 93133 GAAAATCGCCTTTACATTGGGTGGTTCGGTGTACTGATGATCCCGACCCTGTTAACTGCA 93192 Query 155053 GCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGT 155112 | | |||||| || || || || || || || ||||| ||||| |||||||| Sbjct 93193 ACCTCCGTATTCATTACTGCTTTTATCGCAGCTCCGCCAGTAGATATTGACGGTATTCGC 93252 Query 155113 GAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCT 155172 || ||||| |||||||| | || || || ||||| || |||||||||||| || |||| Sbjct 93253 GAGCCCGTTTCTGGTTCTCTTATATACGGGAACAATATAATCTCTGGTGCTATTATCCCC 93312 Query 155173 AGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAG 155232 | || ||| || ||| | |||||||| || ||||||||||| ||| || ||||||| Sbjct 93313 ACCTCCGCCGCTATCGGTTTGCACTTCTACCCCATTTGGGAAGCGGCATCTATTGATGAA 93372 Query 155233 TGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACA 155292 ||| | ||||| || ||||| | | |||| | || | |||||||| | ||| | | Sbjct 93373 TGGCTATACAACGGCGGTCCCTACGAACTAATCGTTCTTCACTTCCTGCTTGGAGTAGCT 93432 Query 155293 GCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGT 155352 ||| |||||| ||||||||||| | ||| | || ||||| ||||||||| | Sbjct 93433 TGCTACATGGGTCGTGAGTGGGAACTTAGCTTCCGCTTGGGTATGCGCCCTTGGATCGCT 93492 Query 155353 GTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGT 155412 ||||| ||||| || || || | || || ||| || || | | || ||| | ||| Sbjct 93493 GTTGCGTACTCAGCCCCTGTTGCAGCCGCCACCGCCGTTTTTTTGATCTACCCTATTGGT 93552 Query 155413 CAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTC 155472 ||||| ||||| || | |||||| | || |||||||| || || |||| |||| || Sbjct 93553 CAAGGAAGCTTCTCCGACGGTATGCCTTTAGGAATCTCTGGCACCTTCAACTTTATGATC 93612 Query 155473 GTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGT 155532 ||||||||||| |||||||| ||||||||||| || ||||||||| | || || || || Sbjct 93613 GTGTTCCAAGCTGAACACAACATCCTTATGCATCCGTTCCACATGTTGGGTGTGGCTGGC 93672 Query 155533 GTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATC 155592 || ||||| |||||||| ||| ||||||||| ||||| ||||| || ||| || ||| Sbjct 93673 GTATTCGGCGGATCTCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGCCTGATC 93732 Query 155593 CGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAA 155652 || ||||| |||||| | || || ||| ||||||| ||| || || ||||| ||| Sbjct 93733 CGGGAAACCACTGAGAATGAATCCGCTAACGCGGGTTACAGGTTTGGTCAGGAAGAGGAA 93792 Query 155653 ACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCC 155712 || ||||||||||| |||||||| || ||||||||||| | |||||||| ||||| | Sbjct 93793 ACATATAACATTGTAGCTGCTCACGGTTACTTCGGTCGATTGATCTTCCAATATGCTAGC 93852 Query 155713 TTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGG 155772 || || ||||| | || ||||| ||| | ||||| ||||| || || | |||||| Sbjct 93853 TTTAATAACTCCCGTTCCCTACACTTTTTCTTGGCTGCTTGGCCAGTAGTAGGTATCTGG 93912 Query 155773 GCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAG 155832 || ||| |||| | || ||||| |||||||| |||||||||||||| ||||| Sbjct 93913 TTTACCGCTTTGGGCATAAGCACAATGGCTTTCAACCTAAACGGTTTCAACTTTAACCAA 93972 Query 155833 TCTGTAGTAGA-CGCTAGTGGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGC 155891 || ||||| || || || || ||||| |||||||| |||||| | |||||||| Sbjct 93973 TCCGTAGTTGATAGCCAG-GGACGTGTCATAAACACATGGGCCGACATTATCAACCGCGC 94031 Query 155892 TGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGC 155951 ||||||||||| || ||||| || ||||||||||||||||||||||| || || || Sbjct 94032 CAACCTTGGTATGGAGGTTATGCATGAACGTAACGCTCACAACTTCCCTCTAGATCTGGC 94091 Query 155952 TGCTGCTGA 155960 | | | ||| Sbjct 94092 TTCCGTTGA 94100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584829658686480